Three-dimensional structure of binase in solution von Reibarkh, M.Ya, Nolde, D.E, Vasilieva, L.I, Bocharov, E.V, Shulga, A.A, Kirpichnikov, M.P, Arseniev, A.S

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Lateral clustering of lipids in hydrated bilayers composed of dioleoylphosphatidylcholine and dipalmitoylphosphatidylcholine von Pyrkova, D. V., Tarasova, N. K., Krylov, N. A., Nolde, D. E., Efremov, R. G.

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A Solvent Model for Simulations of Peptides in Bilayers. I. Membrane-Promoting α-Helix Formation von Efremov, Roman G., Nolde, Dmitry E., Vergoten, Gérard, Arseniev, Alexander S.

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Factors important for fusogenic activity of peptides: molecular modeling study of analogs of fusion peptide of influenza virus hemagglutinin von Efremov, Roman G., Nolde, Dmitry E., Volynsky, Pavel E., Chernyavsky, Andrei A., Dubovskii, Peter V., Arseniev, Alexander S.

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A Solvent Model for Simulations of Peptides in Bilayers. II. Membrane-Spanning α-Helices von Efremov, Roman G., Nolde, Dmitry E., Vergoten, Gérard, Arseniev, Alexander S.

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Toxic principle of selva ant venom is a pore-forming protein transformer von Arseniev, A.S., Pluzhnikov, K.A., Nolde, D.E., Sobol, A.G., Torgov, M.Yu, Sukhanov, S.V., Grishin, E.V.

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Three-Dimensional Structure of Toxin OSK1 from Orthochirus scrobiculosus Scorpion Venom von Jaravine, Victor A, Nolde, Dmitry E, Reibarkh, Michail J, Korolkova, Yulia V, Kozlov, Sergey A, Pluzhnikov, Kirill A, Grishin, Eugene V, Arseniev, Alexander S

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Processing of heteronuclear NMR relaxation data with the new software DASHA von Orekhov, V. Yu, Nolde, D. E., Golovanov, A. P., Korzhnev, D. M., Arseniev, A. S.

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Role of Lipid Charge in Organization of Water/Lipid Bilayer Interface:  Insights via Computer Simulations von Polyansky, Anton A, Volynsky, Pavel E, Nolde, Dmitry E, Arseniev, Alexander S, Efremov, Roman G

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Modeling of peptides and proteins in a membrane environment: I. A solvation model mimicking a lipid bilayer von Nolde, D. E., Volynskii, P. E., Arseniev, A. S., Efremov, R. G.

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Modeling of peptides and proteins in a membrane environment: II. Structural and energetic aspects of glycophorin A in a lipid bilayer von Volynskii, P. E., Nolde, D. E., Arseniev, A. S., Efremov, R. G.

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Interaction of Cardiotoxins with Membranes: A Molecular Modeling Study von Efremov, Roman G., Volynsky, Pavel E., Nolde, Dmitry E., Dubovskii, Peter V., Arseniev, Alexander S.

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Molecular modelling of the nucleotide-binding domain of Wilson's disease protein: location of the ATP-binding site, domain dynamics and potential effects of the major disease mutat... von Efremov, Roman G, Kosinsky, Yuri A, Nolde, Dmitry E, Tsivkovskii, Ruslan, Arseniev, Alexander S, Lutsenko, Svetlana

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Association of transmembrane helices: what determines assembling of a dimer? von Efremov, Roman G, Vereshaga, Yana A, Volynsky, Pavel E, Nolde, Dmitry E, Arseniev, Alexander S

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Helix Interactions in Membranes:  Lessons from Unrestrained Monte Carlo Simulations von Vereshaga, Yana A, Volynsky, Pavel E, Nolde, Dmitry E, Arseniev, Alexander S, Efremov, Roman G

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Three‐dimensional structure of proteolytic fragment 163–231 of bacterioopsin determined from nuclear magnetic resonance data in solution von BARSUKOV, Igor L., NOLDE, Dmitry E., LOMIZE, Andrey L., ARSENIEV, Alexander S.

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Solution of the spatial structure of dimeric transmembrane domains of proteins by heteronuclear NMR spectroscopy and molecular modeling von Volynsky, P. E., Bocharov, E. V., Nolde, D. E., Vereschaga, Ya. A., Mayzel, M. L., Mineev, K. S., Mineeva, E. A., Pustovalova, Yu. E., Gagnidze, I. A., Efremov, R. G., Arseniev, A. S.

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Monte Carlo simulations of voltage-driven translocation of a signal sequence von Efremov, Roman G, Volynsky, Pavel E, Nolde, Dmitry E, van Dalen, Annemieke, de Kruijff, Ben, Arseniev, Alexander S

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Three-dimensional structure of ectatomin from Ectatomma tuberculatum ant venom von Nolde, D.E, Sobol, A.G, Pluzhnikov, K.A, Grishin, E.V, Arseniev, A.S

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Assessment of conformation and energetics of the N-terminal part of elafin via computer simulations von Efremov, Roman G., Volynsky, Pavel E., Dauchez, Manuel A. M., Nolde, Dmitry E., Arseniev, Alexander S., Alix, Alain J. P.

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