Airway response to respiratory syncytial virus has incidental antibacterial effects von Sande, Charles J., Njunge, James M., Mwongeli Ngoi, Joyce, Mutunga, Martin N., Chege, Timothy, Gicheru, Elijah T., Gardiner, Elizabeth M., Gwela, Agnes, Green, Christopher A., Drysdale, Simon B., Berkley, James A., Nokes, D. James, Pollard, Andrew J.

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A computational framework for modelling infectious disease policy based on age and household structure with applications to the COVID-19 pandemic von Hilton, Joe, Riley, Heather, Pellis, Lorenzo, Aziza, Rabia, Brand, Samuel P C, K Kombe, Ivy, Ojal, John, Parisi, Andrea, Keeling, Matt J, Nokes, D James, Manson-Sawko, Robert, House, Thomas

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Local evolutionary patterns of human respiratory syncytial virus derived from whole-genome sequencing von Agoti, Charles N, Otieno, James R, Munywoki, Patrick K, Mwihuri, Alexander G, Cane, Patricia A, Nokes, D James, Kellam, Paul, Cotten, Matthew

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Human Coronavirus NL63 Molecular Epidemiology and Evolutionary Patterns in Rural Coastal Kenya von Kiyuka, Patience K, Agoti, Charles N, Munywoki, Patrick K, Njeru, Regina, Bett, Anne, Otieno, James R, Otieno, Grieven P, Kamau, Everlyn, Clark, Taane G, van der Hoek, Lia, Kellam, Paul, Nokes, D James, Cotten, Matthew

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Rapid spread and diversification of respiratory syncytial virus genotype ON1, Kenya von Agoti, Charles N, Otieno, James R, Gitahi, Caroline W, Cane, Patricia A, Nokes, D James

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COVID-19 transmission dynamics underlying epidemic waves in Kenya von Brand, Samuel P. C., Ojal, John, Aziza, Rabia, Were, Vincent, Okiro, Emelda A., Kombe, Ivy K., Mburu, Caroline, Ogero, Morris, Agweyu, Ambrose, Warimwe, George M., Nyagwange, James, Karanja, Henry, Gitonga, John N., Mugo, Daisy, Uyoga, Sophie, Adetifa, Ifedayo M. O., Scott, J. Anthony G., Otieno, Edward, Murunga, Nickson, Otiende, Mark, Ochola-Oyier, Lynette, Agoti, Charles N., Githinji, George, Kasera, Kadondi, Amoth, Patrick, Mwangangi, Mercy, Aman, Rashid, Ng'ang'a, Wangari, Tsofa, Benjamin, Bejon, Philip, Keeling, Matt J., Nokes, D. James, Barasa, Edwine

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Evolution of respiratory syncytial virus genotype BA in Kilifi, Kenya, 15 years on von Kamau, Everlyn, Otieno, James R., Lewa, Clement S., Mwema, Anthony, Murunga, Nickson, Nokes, D. James, Agoti, Charles N.

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The role of vaccination and public awareness in forecasts of Mpox incidence in the United Kingdom von Brand, Samuel P. C., Cavallaro, Massimo, Cumming, Fergus, Turner, Charlie, Florence, Isaac, Blomquist, Paula, Hilton, Joe, Guzman-Rincon, Laura M., House, Thomas, Nokes, D. James, Keeling, Matt J.

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Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010-2015 von Otieno, James R, Kamau, Everlyn M, Agoti, Charles N, Lewa, Clement, Otieno, Grieven, Bett, Ann, Ngama, Mwanajuma, Cane, Patricia A, Nokes, D James

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Defining the vaccination window for respiratory syncytial virus (RSV) using age-seroprevalence data for children in Kilifi, Kenya von Nyiro, Joyce U, Kombe, Ivy K, Sande, Charles J, Kipkoech, James, Kiyuka, Patience K, Onyango, Clayton O, Munywoki, Patrick K, Kinyanjui, Timothy M, Nokes, D James

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The level and duration of RSV-specific maternal IgG in infants in Kilifi Kenya von Ochola, Rachel, Sande, Charles, Fegan, Gregory, Scott, Paul D, Medley, Graham F, Cane, Patricia A, Nokes, D James

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Individual’s daily behaviour and intergenerational mixing in different social contexts of Kenya von Del Fava, Emanuele, Adema, Irene, Kiti, Moses C., Poletti, Piero, Merler, Stefano, Nokes, D. James, Manfredi, Piero, Melegaro, Alessia

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Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya von Wambua, James, Munywoki, Patrick K, Coletti, Pietro, Nyawanda, Bryan O, Murunga, Nickson, Nokes, D James, Hens, Niel

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Evaluating vaccination strategies for reducing infant respiratory syncytial virus infection in low-income settings von Poletti, Piero, Merler, Stefano, Ajelli, Marco, Manfredi, Piero, Munywoki, Patrick K, Nokes, D, Melegaro, Alessia

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Integrating epidemiological and genetic data with different sampling intensities into a dynamic model of respiratory syncytial virus transmission von Kombe, Ivy K., Agoti, Charles N., Munywoki, Patrick K., Baguelin, Marc, Nokes, D. James, Medley, Graham F.

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Phylogeography and reassortment patterns of human influenza A viruses in sub-Saharan Africa von Owuor, D. Collins, de Laurent, Zaydah R., Oketch, John W., Murunga, Nickson, Otieno, James R., Nabakooza, Grace, Chaves, Sandra S., Nokes, D. James, Agoti, Charles N.

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Identification of missed viruses by metagenomic sequencing of clinical respiratory samples from Kenya von Phan, My V. T., Agoti, Charles N., Munywoki, Patrick K., Otieno, Grieven P., Ngama, Mwanajuma, Kellam, Paul, Cotten, Matthew, Nokes, D. James

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Estimating the cost-effectiveness of maternal vaccination and monoclonal antibodies for respiratory syncytial virus in Kenya and South Africa von Koltai, Mihaly, Moyes, Jocelyn, Nyawanda, Bryan, Nyiro, Joyce, Munywoki, Patrick K, Tempia, Stefano, Li, Xiao, Antillon, Marina, Bilcke, Joke, Flasche, Stefan, Beutels, Philippe, Nokes, D James, Cohen, Cheryl, Jit, Mark

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Local patterns of spread of influenza A H3N2 virus in coastal Kenya over a 1-year period revealed through virus sequence data von Owuor, D. Collins, Ngoi, Joyce M., Nyasimi, Festus M., Murunga, Nickson, Nyiro, Joyce U., Chaves, Sandra S., Nokes, D. James, Agoti, Charles N.

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Tracking the introduction and spread of SARS-CoV-2 in coastal Kenya von Githinji, George, de Laurent, Zaydah R., Mohammed, Khadija Said, Omuoyo, Donwilliams O., Macharia, Peter M., Morobe, John M., Otieno, Edward, Kinyanjui, Samson M., Agweyu, Ambrose, Maitha, Eric, Kitole, Ben, Suleiman, Thani, Mwakinangu, Mohamed, Nyambu, John, Otieno, John, Salim, Barke, Kasera, Kadondi, Kiiru, John, Aman, Rashid, Barasa, Edwine, Warimwe, George, Bejon, Philip, Tsofa, Benjamin, Ochola-Oyier, Lynette Isabella, Nokes, D. James, Agoti, Charles N.

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