A complete tool set for molecular QTL discovery and analysis von Delaneau, Olivier, Ongen, Halit, Brown, Andrew A., Fort, Alexandre, Panousis, Nikolaos I., Dermitzakis, Emmanouil T.

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Coordinated Effects of Sequence Variation on DNA Binding, Chromatin Structure, and Transcription von Kilpinen, Helena, Waszak, Sebastian M., Gschwind, Andreas R., Raghav, Sunil K., Witwicki, Robert M., Orioli, Andrea, Migliavacca, Eugenia, Wiederkehr, Michaël, Gutierrez-Arcelus, Maria, Panousis, Nikolaos I., Yurovsky, Alisa, Lappalainen, Tuuli, Romano-Palumbo, Luciana, Planchon, Alexandra, Bielser, Deborah, Bryois, Julien, Padioleau, Ismael, Udin, Gilles, Thurnheer, Sarah, Hacker, David, Core, Leighton J., Lis, John T., Hernandez, Nouria, Reymond, Alexandre, Deplancke, Bart, Dermitzakis, Emmanouil T.

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Population Variation and Genetic Control of Modular Chromatin Architecture in Humans von Waszak, Sebastian M., Delaneau, Olivier, Gschwind, Andreas R., Kilpinen, Helena, Raghav, Sunil K., Witwicki, Robert M., Orioli, Andrea, Wiederkehr, Michael, Panousis, Nikolaos I., Yurovsky, Alisa, Romano-Palumbo, Luciana, Planchon, Alexandra, Bielser, Deborah, Padioleau, Ismael, Udin, Gilles, Thurnheer, Sarah, Hacker, David, Hernandez, Nouria, Reymond, Alexandre, Deplancke, Bart, Dermitzakis, Emmanouil T.

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Estimating the causal tissues for complex traits and diseases von Ongen, Halit, Brown, Andrew A, Delaneau, Olivier, Panousis, Nikolaos I, Nica, Alexandra C, Dermitzakis, Emmanouil T

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Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studies von Panousis, Nikolaos I, Gutierrez-Arcelus, Maria, Dermitzakis, Emmanouil T, Lappalainen, Tuuli

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Mapping interindividual dynamics of innate immune response at single-cell resolution von Kumasaka, Natsuhiko, Rostom, Raghd, Huang, Ni, Polanski, Krzysztof, Meyer, Kerstin B., Patel, Sharad, Boyd, Rachel, Gomez, Celine, Barnett, Sam N., Panousis, Nikolaos I., Schwartzentruber, Jeremy, Ghoussaini, Maya, Lyons, Paul A., Calero-Nieto, Fernando J., Göttgens, Berthold, Barnes, Josephine L., Worlock, Kaylee B., Yoshida, Masahiro, Nikolić, Marko Z., Stephenson, Emily, Reynolds, Gary, Haniffa, Muzlifah, Marioni, John C., Stegle, Oliver, Hagai, Tzachi, Teichmann, Sarah A.

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Integrated GWAS and Gene Expression Suggest ORM1 as a Potential Regulator of Plasma Levels of Cell-Free DNA and Thrombosis Risk von Lopez, S, Martinez-Perez, A, Rodriguez-Rius, A, Vinuela, A, Brown, AA, Martin-Fernandez, L, Vilalta, N, Arus, M, Panousis, N, Buil, A, Sabater-Lleal, M, Souto, JC, Dermitzakis, ET, Soria, JM

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Toxoplasma gondii and Neospora caninum seroprevalence in dairy sheep and goats mixed stock farming von Anastasia, Diakou, Elias, Papadopoulos, Nikolaos, Panousis, Charilaos, Karatzias, Nektarios, Giadinis

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Extensive fragmentation and re-organization of transcription in Systemic Lupus Erythematosus von Ntasis, Vasilis F., Panousis, Nikolaos I., Tektonidou, Maria G., Dermitzakis, Emmanouil T., Boumpas, Dimitrios T., Bertsias, George K., Nikolaou, Christoforos

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MBV: a method to solve sample mislabeling and detect technical bias in large combined genotype and sequencing assay datasets von Fort, Alexandre, Panousis, Nikolaos I, Garieri, Marco, Antonarakis, Stylianos E, Lappalainen, Tuuli, Dermitzakis, Emmanouil T, Delaneau, Olivier

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Genetic variant effects on gene expression in human pancreatic islets and their implications for T2D von Viñuela, Ana, Varshney, Arushi, van de Bunt, Martijn, Prasad, Rashmi B., Asplund, Olof, Bennett, Amanda, Boehnke, Michael, Brown, Andrew A., Erdos, Michael R., Fadista, João, Hansson, Ola, Hatem, Gad, Howald, Cédric, Iyengar, Apoorva K., Johnson, Paul, Krus, Ulrika, MacDonald, Patrick E., Mahajan, Anubha, Manning Fox, Jocelyn E., Narisu, Narisu, Nylander, Vibe, Orchard, Peter, Oskolkov, Nikolay, Panousis, Nikolaos I., Payne, Anthony, Stitzel, Michael L., Vadlamudi, Swarooparani, Welch, Ryan, Collins, Francis S., Mohlke, Karen L., Gloyn, Anna L., Scott, Laura J., Dermitzakis, Emmanouil T., Groop, Leif, Parker, Stephen C. J., McCarthy, Mark I.

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Single cell transcriptome in aneuploidies reveals mechanisms of gene dosage imbalance von Stamoulis, Georgios, Garieri, Marco, Makrythanasis, Periklis, Letourneau, Audrey, Guipponi, Michel, Panousis, Nikolaos, Sloan-Béna, Frédérique, Falconnet, Emilie, Ribaux, Pascale, Borel, Christelle, Santoni, Federico, Antonarakis, Stylianos E.

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Fine-mapping and molecular characterisation of primary sclerosing cholangitis genetic risk loci von Goode, Elizabeth C., Fachal, Laura, Panousis, Nikolaos, Moutsianas, Loukas, McIntyre, Rebecca E., Bai, Benjamin Yu Hang, Kawasaki, Norihito, Wittmann, Alexandra, Raine, Tim, Rushbrook, Simon M., Anderson, Carl A.

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Identifying novel regulatory effects for clinically relevant genes through the study of the Greek population von Rouskas, Konstantinos, Katsareli, Efthymia A, Amerikanou, Charalampia, Dimopoulos, Alexandros C, Glentis, Stavros, Kalantzi, Alexandra, Skoulakis, Anargyros, Panousis, Nikolaos, Ongen, Halit, Bielser, Deborah, Planchon, Alexandra, Romano, Luciana, Harokopos, Vaggelis, Reczko, Martin, Moulos, Panagiotis, Griniatsos, Ioannis, Diamantis, Theodoros, Dermitzakis, Emmanouil T, Ragoussis, Jiannis, Dedoussis, George, Dimas, Antigone S

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Association of bulk tank milk urea nitrogen concentration with elevated individual cow values and investigation of sampling frequency for accurate assessment von Siachos, Nektarios, Panousis, Nikolaos, Valergakis, Georgios E.

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Time-dependent genetic effects on gene expression implicate aging processes von Bryois, Julien, Buil, Alfonso, Ferreira, Pedro G, Panousis, Nikolaos I, Brown, Andrew A, Viñuela, Ana, Planchon, Alexandra, Bielser, Deborah, Small, Kerrin, Spector, Tim, Dermitzakis, Emmanouil T

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First detection of Cupriavidus gilardii in a bovine neonatal diarrhea outbreak von Papageorgiou, Konstantinos, Stoikou, Aikaterini, Delis, Georgios, Giantsis, Ioannis A, Stamelou, Efthymia, Sofia, Marina, Papadopoulos, Dimitrios, Panousis, Nikolaos, Palamidas, Paraskevas, Billinis, Charalampos, Kritas, Spyridon K, Petridou, Evanthia

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Udder Ultrasonography of Dairy Cows: Investigating the Relationship between Echotexture, Blood Flow, Somatic Cell Count and Milk Yield during Dry Period and Lactation von Themistokleous, Konstantinos S, Papadopoulos, Iraklis, Panousis, Nikolaos, Zdragas, Antonios, Arsenos, Georgios, Kiossis, Evangelos

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Evaluation of Factors Affecting Colostrum Quality and Quantity in Holstein Dairy Cattle von Soufleri, Aikaterini, Banos, Georgios, Panousis, Nikolaos, Fletouris, Dimitrios, Arsenos, Georgios, Kougioumtzis, Alexandros, Valergakis, Georgios E.

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Association of Body Condition Score with Ultrasound Measurements of Backfat and Longissimus Dorsi Muscle Thickness in Periparturient Holstein Cows von Siachos, Nektarios, Oikonomou, Georgios, Panousis, Nikolaos, Banos, Georgios, Arsenos, Georgios, Valergakis, Georgios E

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