Sambamba: fast processing of NGS alignment formats von Tarasov, Artem, Vilella, Albert J, Cuppen, Edwin, Nijman, Isaac J, Prins, Pjotr

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Differentiation of European cattle by AFLP fingerprinting von Negrini, R, Nijman, I.J, Milanesi, E, Moazami-Goudarzi, K, Williams, J.L, Erhardt, G, Dunner, S, Rodellar, C, Valentini, A, Bradley, D.G, Olsaker, I, Kantanen, J, Ajmone-Marsan, P, Lenstra, J.A

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Chromothripsis is a common mechanism driving genomic rearrangements in primary and metastatic colorectal cancer von Kloosterman, Wigard P, Hoogstraat, Marlous, Paling, Oscar, Tavakoli-Yaraki, Masoumeh, Renkens, Ivo, Vermaat, Joost S, van Roosmalen, Markus J, van Lieshout, Stef, Nijman, Isaac J, Roessingh, Wijnand, van’t Slot, Ruben, van de Belt, José, Guryev, Victor, Koudijs, Marco, Voest, Emile, Cuppen, Edwin

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A nonsense mutation in B3GALNT2 is concordant with hydrocephalus in Friesian horses von Ducro, Bart J, Schurink, Anouk, Bastiaansen, John W M, Boegheim, Iris J M, van Steenbeek, Frank G, Vos-Loohuis, Manon, Nijman, Isaac J, Monroe, Glen R, Hellinga, Ids, Dibbits, Bert W, Back, Willem, Leegwater, Peter A J

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Genetic variants associated with protein C levels von Vossen, C. Y., Koeleman, B. P., Hasstedt, S. J., Nijman, I. J., Renkens, I. J., Callas, P. W., Rosendaal, F. R., Bovill, E. G.

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Genome-wide survey indicates involvement of loci on canine chromosomes 7 and 31 in patellar luxation in Flat-Coated Retrievers von Lavrijsen, Ineke C M, Leegwater, Peter A J, Wangdee, Chalika, van Steenbeek, Frank G, Schwencke, Monique, Breur, Gert J, Meutstege, Freek J, Nijman, Isaac J, Cuppen, Edwin, Heuven, Henri C M, Hazewinkel, Herman A W

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Effectiveness of whole-exome sequencing and costs of the traditional diagnostic trajectory in children with intellectual disability von Monroe, G.R, Frederix, G.W.J, Savelberg, S.M, de Vries, T.I, Duran, K.J, van der Smagt, J.J, Terhal, P.A, van Hasselt, P.M, Kroes, H.Y, Verhoeven - Duif, N.M, Nijman, I.J, Carbo, E.C, van Gassen, K.L.I, Knoers, N.V, Hövels, A.M, van Haelst, M.M, Visser, G, Van Haaften, G

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Systematic generation of in vivo G protein-coupled receptor mutants in the rat von van Boxtel, R, Vroling, B, Toonen, P, Nijman, I J, van Roekel, H, Verheul, M, Baakman, C, Guryev, V, Vriend, G, Cuppen, E

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Differentiation of cattle species in beef by PCR-RFLP of mitochondrial and satellite DNA von Verkaar, E.L.C., Nijman, I.J., Boutaga, K., Lenstra, J.A.

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Effector identification in the lettuce downy mildew Bremia lactucae by massively parallel transcriptome sequencing von Stassen, J.H.M, Seidl, M.F, Vergeer, P.W.J, Nijman, I.J, Snel, B, Cuppen, E, van den Ackerveken, A.F.J.M

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Llama heavy-chain V regions consist of at least four distinct subfamilies revealing novel sequence features von Harmsen, Michiel M., Ruuls, Robin C., Nijman, Isaäc J., Niewold, Theodoor A., Frenken, Leon G.J., de Geus, Bernard

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Hybridization of banteng (Bos javanicus) and zebu (Bos indicus) revealed by mitochondrial DNA, satellite DNA, AFLP and microsatellites von Nijman, I.J, Otsen, M, Verkaar, E.L.C, Ruijter, C. de, Hanekamp, E, Ochieng, J.W, Shamshad, S, Rege, J.E.O, Hanotte, O, Barwegen, M.W

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Signatures of selection? patterns of microsatellite diversity on a chromosome containing a selected locus von Wiener, P, Burton, D, Ajmone-Marsan, P, Dunner, S, Mommens, G, Nijman, I.J, Rodellar, C, Valentini, A, Wiliams, J.L

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Satellite DNA polymorphisms and AFLP correlate with Bos indicus-taurus hybridization von Nijman, 1I. J., Bradley, D. G., Hanotte, O., Otsen, M., Lenstra, J. A.

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Genome-wide survey indicates involvement of loci on canine chromosomes 7 and 31 in patellar luxation in Flat-Coated Retrievers von Lavrijsen, I.C.M, Leegwater, P.A.J, Wangdee, C, van Steenbeek, F.G, Schwencke, M, Breur, G.J, Meutstege, F.J, Nijman, I.J, Cuppen, E.P.J.G, Heuven, H.C.M, Hazewinkel, H.A.W

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A satellite DNA element specific for roe deer (Capreolus capreolus) von Buntjer, J B, Nijman, I J, Zijlstra, C, Lenstra, J A

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Cosmid-derived markers anchoring the bovine genetic map to the physical map von Ferretti, L, Urquhart, B G, Eggen, A, Olsaker, I, Harlizius, B, Castiglioni, B, Mezzelani, A, Solinas Toldo, S, Thieven, U, Zhang, Y, Morgan, A L, Teres, V M, Schwerin, M, Martin-Burriel, I, Chowdhary, B P, Erhardt, G, Nijman, I J, Cribiu, E P, Barendse, W, Leveziel, H, Fries, R, Williams, J L

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A systematic genome-wide analysis of zebrafish protein-coding gene function von Kettleborough, R.N.W, Busch-Nentwich, E.M, Harvey, S.A, Dooley, C.M, de Bruijn, E, van Eeden, F, Sealy, I, White, R.J, Herd, C, Nijman, I.J, Fenyes, F, Mehroke, S, Scahill, C, Gibbons, R, Wali, N, Carruthers, S, Hall, A, Yen, J, Cuppen, E, Stemple, D.L

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Allele frequencies and diversity parameters of 27 single nucleotide polymorphisms within and across goat breeds von CAPPUCCIO, I, PARISET, L, AJMONE-MARSAN, P, DUNNER, S, CORTES, O, ERHARDT, G, LÜHKEN, G, GUTSCHER, K, JOOST, S, NIJMAN, I.J, LENSTRA, J.A, ENGLAND, P.R, ZUNDEL, S, OBEXER-RUFF, G, BEJA-PEREIRA, A, VALENTINI, A

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Systematic generation of in vivo G protein-coupled receptor mutants in the rat von van Boxtel, R, Vroling, B, Toonen, P, Nijman, I.J, van Roekel, H, Verheul, M, Baakman, C, Guryev, V, Vriend, G, Cuppen, E

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