NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations von Valiev, M., Bylaska, E.J., Govind, N., Kowalski, K., Straatsma, T.P., Van Dam, H.J.J., Wang, D., Nieplocha, J., Apra, E., Windus, T.L., de Jong, W.A.

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ScalaBLAST: A Scalable Implementation of BLAST for High-Performance Data-Intensive Bioinformatics Analysis von Oehmen, C., Nieplocha, J.

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Massive contingency analysis with high performance computing von Zhenyu Huang, Yousu Chen, Nieplocha, J.

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High performance computational chemistry: An overview of NWChem a distributed parallel application von Kendall, Ricky A., Aprà, Edoardo, Bernholdt, David E., Bylaska, Eric J., Dupuis, Michel, Fann, George I., Harrison, Robert J., Ju, Jialin, Nichols, Jeffrey A., Nieplocha, Jarek, Straatsma, T.P., Windus, Theresa L., Wong, Adrian T.

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Advances, Applications and Performance of the Global Arrays Shared Memory Programming Toolkit von Nieplocha, Jarek, Palmer, Bruce, Tipparaju, Vinod, Krishnan, Manojkumar, Trease, Harold, Aprà, Edoardo

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High Performance Remote Memory Access Communication: The Armci Approach von Nieplocha, J., Tipparaju, V., Krishnan, M., Panda, D. K.

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ARMCI: A portable remote memory copy library for distributed array libraries and compiler run-time systems von Nieplocha, Jarek, Carpenter, Bryan

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Implementation and evaluation of active storage in modern parallel file systems von Piernas-Canovas, Juan, Nieplocha, Jarek

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A Component Architecture for High-Performance Scientific Computing von Bernholdt, David E., Allan, Benjamin A., Armstrong, Robert, Bertrand, Felipe, Chiu, Kenneth, Dahlgren, Tamara L., Damevski, Kostadin, Elwasif, Wael R., Epperly, Thomas G. W., Govindaraju, Madhusudhan, Katz, Daniel S., Kohl, James A., Krishnan, Manoj, Kumfert, Gary, Larson, J. Walter, Lefantzi, Sophia, Lewis, Michael J., Malony, Allen D., Mclnnes, Lois C., Nieplocha, Jarek, Norris, Boyana, Parker, Steven G., Ray, Jaideep, Shende, Sameer, Windus, Theresa L., Zhou, Shujia

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Transforming power grid operations via high performance computing von Zhenyu Huang, Nieplocha, J.

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Component-based integration of chemistry and optimization software von Kenny, Joseph P., Benson, Steven J., Alexeev, Yuri, Sarich, Jason, Janssen, Curtis L., Mcinnes, Lois Curfman, Krishnan, Manojkumar, Nieplocha, Jarek, Jurrus, Elizabeth, Fahlstrom, Carl, Windus, Theresa L.

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Global arrays: A nonuniform memory access programming model for high-performance computers von Nieplocha, Jaroslaw, Harrison, RobertJ, Littlefield, RichardJ

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Design and implementation of a high-performance CCA event service von Gorton, Ian, Chavarria, Daniel, Nieplocha, Jarek

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An efficient parallelization scheme for molecular dynamics simulations with many-body, flexible, polarizable empirical potentials: application to water von Fanourgakis, George S., Tipparaju, Vinod, Nieplocha, Jarek, Xantheas, Sotiris S.

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Data and Computation Abstractions for Dynamic and Irregular Computations von Krishnamoorthy, Sriram, Nieplocha, Jarek, Sadayappan, P.

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Efficient Management of Complex Striped Files in Active Storage von Piernas, Juan, Nieplocha, Jarek

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SFT von Petrini, Fabrizio, Nieplocha, Jarek, Tipparaju, Vinod

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SFT: scalable fault tolerance von Petrini, Fabrizio, Nieplocha, Jarek, Tipparaju, Vinod

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A framework for characterizing overlap of communication and computation in parallel applications von Shet, Aniruddha G., Sadayappan, P., Bernholdt, David E., Nieplocha, Jarek, Tipparaju, Vinod

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SFT : Scalable fault tolerance : Operating and runtime systems for high-end computing systems von PETRINI, Fabrizio, NIEPLOCHA, Jarek, TIPPARAJU, Vinod

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