Oscillospira and related bacteria – From metagenomic species to metabolic features von Gophna, Uri, Konikoff, Tom, Nielsen, Henrik Bjørn

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An online atlas of human plasma metabolite signatures of gut microbiome composition von Dekkers, Koen F., Sayols-Baixeras, Sergi, Baldanzi, Gabriel, Nowak, Christoph, Hammar, Ulf, Nguyen, Diem, Varotsis, Georgios, Brunkwall, Louise, Nielsen, Nynne, Eklund, Aron C., Bak Holm, Jacob, Nielsen, H. Bjørn, Ottosson, Filip, Lin, Yi-Ting, Ahmad, Shafqat, Lind, Lars, Sundström, Johan, Engström, Gunnar, Smith, J. Gustav, Ärnlöv, Johan, Orho-Melander, Marju, Fall, Tove

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A low-gluten diet induces changes in the intestinal microbiome of healthy Danish adults von Hansen, Lea B. S., Roager, Henrik M., Søndertoft, Nadja B., Gøbel, Rikke J., Kristensen, Mette, Vallès-Colomer, Mireia, Vieira-Silva, Sara, Ibrügger, Sabine, Lind, Mads V., Mærkedahl, Rasmus B., Bahl, Martin I., Madsen, Mia L., Havelund, Jesper, Falony, Gwen, Tetens, Inge, Nielsen, Trine, Allin, Kristine H., Frandsen, Henrik L., Hartmann, Bolette, Holst, Jens Juul, Sparholt, Morten H., Holck, Jesper, Blennow, Andreas, Moll, Janne Marie, Meyer, Anne S., Hoppe, Camilla, Poulsen, Jørgen H., Carvalho, Vera, Sagnelli, Domenico, Dalgaard, Marlene D., Christensen, Anders F., Lydolph, Magnus Christian, Ross, Alastair B., Villas-Bôas, Silas, Brix, Susanne, Sicheritz-Pontén, Thomas, Buschard, Karsten, Linneberg, Allan, Rumessen, Jüri J., Ekstrøm, Claus T., Ritz, Christian, Kristiansen, Karsten, Nielsen, H. Bjørn, Vestergaard, Henrik, Færgeman, Nils J., Raes, Jeroen, Frøkiær, Hanne, Hansen, Torben, Lauritzen, Lotte, Gupta, Ramneek, Licht, Tine Rask, Pedersen, Oluf

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Autoimmunity in Arabidopsis acd11 is mediated by epigenetic regulation of an immune receptor von Palma, Kristoffer, Thorgrimsen, Stephan, Malinovsky, Frederikke Gro, Fiil, Berthe Katrine, Nielsen, H Bjørn, Brodersen, Peter, Hofius, Daniel, Petersen, Morten, Mundy, John

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Transcriptome Responses to Combinations of Stresses in Arabidopsis von Rasmussen, Simon, Barah, Pankaj, Suarez-Rodriguez, Maria Cristina, Bressendorff, Simon, Friis, Pia, Costantino, Paolo, Bones, Atle M., Nielsen, Henrik Bjørn, Mundy, John

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Conjugated C-6 hydroxylated bile acids in serum relate to human metabolic health and gut Clostridia species von Petersen, Anders Ø, Julienne, Hanna, Hyötyläinen, Tuulia, Sen, Partho, Fan, Yong, Pedersen, Helle Krogh, Jäntti, Sirkku, Hansen, Tue H., Nielsen, Trine, Jørgensen, Torben, Hansen, Torben, Myers, Pernille Neve, Nielsen, H. Bjørn, Ehrlich, S. Dusko, Orešič, Matej, Pedersen, Oluf

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The intestinal microbiome is a co-determinant of the postprandial plasma glucose response von Sondertoft, Nadja B., Vogt, Josef K., Arumugam, Manimozhiyan, Kristensen, Mette, Gobel, Rikke J., Fan, Yong, Lyu, Liwei, Bahl, Martin, Eriksen, Carsten, Angquist, Lars, Frokiaer, Hanne, Hansen, Tue H., Brix, Susanne, Nielsen, H. Bjorn, Hansen, Torben, Vestergaard, Henrik, Gupta, Ramneek, Licht, Tine R., Lauritzen, Lotte, Pedersen, Oluf

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A catalog of the mouse gut metagenome von Xiao, Liang, Feng, Qiang, Liang, Suisha, Sonne, Si Brask, Xia, Zhongkui, Qiu, Xinmin, Li, Xiaoping, Long, Hua, Zhang, Jianfeng, Zhang, Dongya, Liu, Chuan, Fang, Zhiwei, Chou, Joyce, Glanville, Jacob, Hao, Qin, Kotowska, Dorota, Colding, Camilla, Licht, Tine Rask, Wu, Donghai, Yu, Jun, Sung, Joseph Jao Yiu, Liang, Qiaoyi, Li, Junhua, Jia, Huijue, Lan, Zhou, Tremaroli, Valentina, Dworzynski, Piotr, Nielsen, H Bjørn, Bäckhed, Fredrik, Doré, Joël, Le Chatelier, Emmanuelle, Ehrlich, S Dusko, Lin, John C, Arumugam, Manimozhiyan, Wang, Jun, Madsen, Lise, Kristiansen, Karsten

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transcriptionally active regions in the genome of Bacillus subtilis von Rasmussen, Simon, Nielsen, Henrik Bjørn, Jarmer, Hanne

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Arabidopsis MAP kinase 4 regulates salicylic acid- and jasmonic acid/ethylene-dependent responses via EDS1 and PAD4 von Brodersen, Peter, Petersen, Morten, Bjørn Nielsen, Henrik, Zhu, Shijiang, Newman, Mari-Anne, Shokat, Kevan M, Rietz, Steffen, Parker, Jane, Mundy, John

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Metagenomic species profiling using universal phylogenetic marker genes von Sunagawa, Shinichi, Mende, Daniel R, Zeller, Georg, Izquierdo-Carrasco, Fernando, Berger, Simon A, Kultima, Jens Roat, Coelho, Luis Pedro, Arumugam, Manimozhiyan, Tap, Julien, Nielsen, Henrik Bjørn, Rasmussen, Simon, Brunak, Søren, Pedersen, Oluf, Guarner, Francisco, de Vos, Willem M, Wang, Jun, Li, Junhua, Doré, Joël, Ehrlich, S Dusko, Stamatakis, Alexandros, Bork, Peer

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A human gut microbial gene catalogue established by metagenomic sequencing von Zhu, Hongmei, Li, Shengting, Cao, Jianjun, Mende, Daniel R, Yu, Chang, Xu, Junming, Turner, Keith, Arumugam, Manimozhiyan, Nielsen, Trine, Wang, Jian, Guarner, Francisco, Bertalan, Marcelo, Sicheritz-Ponten, Thomas, Li, Shaochuan, Li, Songgang, Li, Ruiqiang, Qin, Junjie, Tap, Julien, Li, Yingrui, Pedersen, Oluf, Pons, Nicolas, Doré, Joel, Bork, Peer, Burgdorf, Kristoffer Solvsten, Renault, Pierre, Lepage, Patricia, Yamada, Takuji, Weissenbach, Jean, Xie, Yinlong, Zhou, Yan, Raes, Jeroen, Qin, Nan, Brunak, Søren, Liang, Huiqing, Levenez, Florence, Batto, Jean-Michel, Jian, Min, Li, Junhua, Parkhill, Julian, Linneberg, Allan, Nielsen, H. Bjørn, Kristiansen, Karsten, Yang, Huanming, Wang, Bo, Zheng, Huisong, Wang, Jun, Zhang, Xiuqing, Pelletier, Eric, Hansen, Torben, Le Paslier, Denis, Ehrlich, S. Dusko, Li, Dongfang, Manichanh, Chaysavanh

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Streptococcus Species Abundance in the Gut Is Linked to Subclinical Coronary Atherosclerosis in 8973 Participants From the SCAPIS Cohort von Sayols-Baixeras, Sergi, Dekkers, Koen F., Baldanzi, Gabriel, Jönsson, Daniel, Hammar, Ulf, Lin, Yi-Ting, Ahmad, Shafqat, Nguyen, Diem, Varotsis, Georgios, Pita, Sara, Nielsen, Nynne, Eklund, Aron C., Holm, Jacob B., Nielsen, H. Bjørn, Ericson, Ulrika, Brunkwall, Louise, Ottosson, Filip, Larsson, Anna, Ericson, Dan, Klinge, Björn, Nilsson, Peter M., Malinovschi, Andrei, Lind, Lars, Bergström, Göran, Sundström, Johan, Ärnlöv, Johan, Engström, Gunnar, Smith, J. Gustav, Orho-Melander, Marju, Fall, Tove

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Gut Microbiota Perturbation in IgA Deficiency Is Influenced by IgA-Autoantibody Status von Moll, Janne Marie, Myers, Pernille Neve, Zhang, Chenchen, Eriksen, Carsten, Wolf, Johannes, Appelberg, K. Sofia, Lindberg, Greger, Bahl, Martin Iain, Zhao, Hui, Pan-Hammarström, Qiang, Cai, Kaiye, Jia, Huijue, Borte, Stephan, Nielsen, H. Bjørn, Kristiansen, Karsten, Brix, Susanne, Hammarström, Lennart

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Interventional Influence of the Intestinal Microbiome Through Dietary Intervention and Bowel Cleansing Might Improve Motor Symptoms in Parkinson's Disease von Hegelmaier, Tobias, Lebbing, Marco, Duscha, Alexander, Tomaske, Laura, Toenges, Lars, Holm, Jacob Bak, Nielsen, Henrik Bjorn, Gatermann, Soeren G., Przuntek, Horst, Haghikia, Aiden

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CHAMP delivers accurate taxonomic profiles of the prokaryotes, eukaryotes, and bacteriophages in the human microbiome von Pita, Sara, Myers, Pernille Neve, Johansen, Joachim, Russel, Jakob, Nielsen, Mads Cort, Eklund, Aron C, Nielsen, Henrik Bjørn

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Author Correction: An online atlas of human plasma metabolite signatures of gut microbiome composition von Dekkers, Koen F., Sayols-Baixeras, Sergi, Baldanzi, Gabriel, Nowak, Christoph, Hammar, Ulf, Nguyen, Diem, Varotsis, Georgios, Brunkwall, Louise, Nielsen, Nynne, Eklund, Aron C., Bak Holm, Jacob, Nielsen, H. Bjørn, Ottosson, Filip, Lin, Yi-Ting, Ahmad, Shafqat, Lind, Lars, Sundström, Johan, Engström, Gunnar, Smith, J. Gustav, Ärnlöv, Johan, Orho-Melander, Marju, Fall, Tove

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Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota von Forslund, Kristoffer, Hildebrand, Falk, Nielsen, Trine, Falony, Gwen, Le Chatelier, Emmanuelle, Sunagawa, Shinichi, Prifti, Edi, Vieira-Silva, Sara, Gudmundsdottir, Valborg, Krogh Pedersen, Helle, Arumugam, Manimozhiyan, Kristiansen, Karsten, Yvonne Voigt, Anita, Vestergaard, Henrik, Hercog, Rajna, Igor Costea, Paul, Roat Kultima, Jens, Li, Junhua, Jørgensen, Torben, Levenez, Florence, Dore, Joël, Bjørn Nielsen, H., Brunak, Søren, Raes, Jeroen, Hansen, Torben, Wang, Jun, Dusko Ehrlich, S., Bork, Peer, Pedersen, Oluf

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Microarray analysis reveals transcriptional plasticity in the reef building coral Acropora millepora von Bay, Line K, Ulstrup, Karin E, Nielsen, H. Bjorn, Jarmer, Hanne, Goffard, Nicolas, Willis, Bette L, Miller, David J, Van Oppen, Madeleine J.H

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Cross-generational bacterial strain transfer to an infant after fecal microbiota transplantation to a pregnant patient: a case report von Wei, Shaodong, Jespersen, Marie Louise, Baunwall, Simon Mark Dahl, Myers, Pernille Neve, Smith, Emilie Milton, Dahlerup, Jens Frederik, Rasmussen, Simon, Nielsen, Henrik Bjørn, Licht, Tine Rask, Bahl, Martin Iain, Hvas, Christian Lodberg

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