Cell-accurate optical mapping across the entire developing heart von Weber, Michael, Scherf, Nico, Meyer, Alexander M, Panáková, Daniela, Kohl, Peter, Huisken, Jan

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Multi-scale imaging and analysis identify pan-embryo cell dynamics of germlayer formation in zebrafish von Shah, Gopi, Thierbach, Konstantin, Schmid, Benjamin, Waschke, Johannes, Reade, Anna, Hlawitschka, Mario, Roeder, Ingo, Scherf, Nico, Huisken, Jan

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High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics von Schmid, Benjamin, Shah, Gopi, Scherf, Nico, Weber, Michael, Thierbach, Konstantin, Campos, Citlali Pérez, Roeder, Ingo, Aanstad, Pia, Huisken, Jan

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linus: Conveniently explore, share, and present large-scale biological trajectory data in a web browser von Waschke, Johannes, Hlawitschka, Mario, Anlas, Kerim, Trivedi, Vikas, Roeder, Ingo, Huisken, Jan, Scherf, Nico

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Domain-specific cues improve robustness of deep learning-based segmentation of CT volumes von Kloenne, Marie, Niehaus, Sebastian, Lampe, Leonie, Merola, Alberto, Reinelt, Janis, Roeder, Ingo, Scherf, Nico

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How to predict relapse in leukemia using time series data: A comparative in silico study von Hoffmann, Helene, Baldow, Christoph, Zerjatke, Thomas, Gottschalk, Andrea, Wagner, Sebastian, Karg, Elena, Niehaus, Sebastian, Roeder, Ingo, Glauche, Ingmar, Scherf, Nico

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Ontology patterns for the representation of quality changes of cells in time von Burek, Patryk, Scherf, Nico, Herre, Heinrich

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Simulating Local Deformations in the Human Cortex Due to Blood Flow-Induced Changes in Mechanical Tissue Properties: Impact on Functional Magnetic Resonance Imaging von Zoraghi, Mahsa, Scherf, Nico, Jaeger, Carsten, Sack, Ingolf, Hirsch, Sebastian, Hetzer, Stefan, Weiskopf, Nikolaus

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In vivo time-lapse imaging shows diverse niche engagement by quiescent and naturally activated hematopoietic stem cells von Rashidi, Narges M., Scott, Mark K., Scherf, Nico, Krinner, Axel, Kalchschmidt, Jens S., Gounaris, Kleoniki, Selkirk, Murray E., Roeder, Ingo, Lo Celso, Cristina

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The smart and gentle microscope von Scherf, Nico, Huisken, Jan

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Automatic Lung Segmentation and Quantification of Aeration in Computed Tomography of the Chest Using 3D Transfer Learning von Maiello, Lorenzo, Ball, Lorenzo, Micali, Marco, Iannuzzi, Francesca, Scherf, Nico, Hoffmann, Ralf-Thorsten, Gama de Abreu, Marcelo, Pelosi, Paolo, Huhle, Robert

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Single Cell Phenotyping Reveals Heterogeneity Among Hematopoietic Stem Cells Following Infection von MacLean, Adam L., Smith, Maia A., Liepe, Juliane, Sim, Aaron, Khorshed, Reema, Rashidi, Narges M., Scherf, Nico, Krinner, Axel, Roeder, Ingo, Lo Celso, Cristina, Stumpf, Michael P. H.

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TraCurate: Efficiently curating cell tracks von Wagner, Sebastian, Thierbach, Konstantin, Zerjatke, Thomas, Glauche, Ingmar, Roeder, Ingo, Scherf, Nico

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A Standardized Clinical Data Harmonization Pipeline for Scalable AI Application Deployment (FHIR-DHP): Validation and Usability Study von Williams, Elena, Kienast, Manuel, Medawar, Evelyn, Reinelt, Janis, Merola, Alberto, Klopfenstein, Sophie Anne Ines, Flint, Anne Rike, Heeren, Patrick, Poncette, Akira-Sebastian, Balzer, Felix, Beimes, Julian, von Bünau, Paul, Chromik, Jonas, Arnrich, Bert, Scherf, Nico, Niehaus, Sebastian

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Developing 3D microscopy with CLARITY on human brain tissue: Towards a tool for informing and validating MRI-based histology von Morawski, Markus, Kirilina, Evgeniya, Scherf, Nico, Jäger, Carsten, Reimann, Katja, Trampel, Robert, Gavriilidis, Filippos, Geyer, Stefan, Biedermann, Bernd, Arendt, Thomas, Weiskopf, Nikolaus

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Hemispheric Asymmetry of Intracortical Myelin Orientation in the Mouse Auditory Cortex von Ruthig, Philip, Müller, Gesine Fiona, Fink, Marion, Scherf, Nico, Morawski, Markus, Schönwiesner, Marc

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linus: Conveniently explore, share, and present large-scale biological trajectory data in a web browser von Johannes Waschke, Mario Hlawitschka, Kerim Anlas, Vikas Trivedi, Ingo Roeder, Jan Huisken, Nico Scherf

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A pattern-based approach to a cell tracking ontology von Burek, Patryk, Scherf, Nico, Herre, Heinrich

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Spatiotemporal Deformable Prototypes for Motion Anomaly Detection von Bensch, Robert, Scherf, Nico, Huisken, Jan, Brox, Thomas, Ronneberger, Olaf

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Involvement of GPR17 in Neuronal Fibre Outgrowth von Braune, Max, Scherf, Nico, Heine, Claudia, Sygnecka, Katja, Pillaiyar, Thanigaimalai, Parravicini, Chiara, Heimrich, Bernd, Abbracchio, Maria P, Müller, Christa E, Franke, Heike

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