Interactive metagenomic visualization in a Web browser von Ondov, Brian D, Bergman, Nicholas H, Phillippy, Adam M

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Streamlined inactivation, amplification, and Cas13-based detection of SARS-CoV-2 von Arizti-Sanz, Jon, Freije, Catherine A., Stanton, Alexandra C., Petros, Brittany A., Boehm, Chloe K., Siddiqui, Sameed, Shaw, Bennett M., Adams, Gordon, Kosoko-Thoroddsen, Tinna-Solveig F., Kemball, Molly E., Uwanibe, Jessica N., Ajogbasile, Fehintola V., Eromon, Philomena E., Gross, Robin, Wronka, Loni, Caviness, Katie, Hensley, Lisa E., Bergman, Nicholas H., MacInnis, Bronwyn L., Happi, Christian T., Lemieux, Jacob E., Sabeti, Pardis C., Myhrvold, Cameron

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Canu: scalable and accurate long-read assembly via adaptive k -mer weighting and repeat separation von Koren, Sergey, Walenz, Brian P, Berlin, Konstantin, Miller, Jason R, Bergman, Nicholas H, Phillippy, Adam M

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Radical remodeling of the Y chromosome in a recent radiation of malaria mosquitoes von Hall, Andrew Brantley, Papathanos, Philippos-Aris, Sharma, Atashi, Cheng, Changde, Akbari, Omar S., Assour, Lauren, Bergman, Nicholas H., Cagnetti, Alessia, Crisanti, Andrea, Dottorini, Tania, Fiorentini, Elisa, Galizi, Roberto, Hnath, Jonathan, Jiang, Xiaofang, Koren, Sergey, Nolan, Tony, Radune, Diane, Sharakhova, Maria V., Steele, Aaron, Timoshevskiy, Vladimir A., Windbichler, Nikolai, Zhang, Simo, Hahn, Matthew W., Phillippy, Adam M., Emrich, Scott J., Sharakhov, Igor V., Tu, Zhijian Jake, Besansky, Nora J.

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Structure and Complexity of a Bacterial Transcriptome von PASSALACQUA, Karla D, VARADARAJAN, Anjana, ONDOV, Brian D, OKOU, David T, ZWICK, Michael E, BERGMAN, Nicholas H

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Genomic fluidity: an integrative view of gene diversity within microbial populations von Kislyuk, Andrey O, Haegeman, Bart, Bergman, Nicholas H, Weitz, Joshua S

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Mash: fast genome and metagenome distance estimation using MinHash von Ondov, Brian D, Treangen, Todd J, Melsted, Páll, Mallonee, Adam B, Bergman, Nicholas H, Koren, Sergey, Phillippy, Adam M

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Molecular epidemiologic investigation of an anthrax outbreak among heroin users, Europe von Price, Erin P, Seymour, Meagan L, Sarovich, Derek S, Latham, Jennie, Wolken, Spenser R, Mason, Joanne, Vincent, Gemma, Drees, Kevin P, Beckstrom-Sternberg, Stephen M, Phillippy, Adam M, Koren, Sergey, Okinaka, Richard T, Chung, Wai-Kwan, Schupp, James M, Wagner, David M, Vipond, Richard, Foster, Jeffrey T, Bergman, Nicholas H, Burans, James, Pearson, Talima, Brooks, Tim, Keim, Paul

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Efficient mapping of Applied Biosystems SOLiD sequence data to a reference genome for functional genomic applications von Ondov, Brian D., Varadarajan, Anjana, Passalacqua, Karla D., Bergman, Nicholas H.

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Comparative transcriptional profiling of Bacillus cereus sensu lato strains during growth in CO2-bicarbonate and aerobic atmospheres von Passalacqua, Karla D, Varadarajan, Anjana, Byrd, Benjamin, Bergman, Nicholas H

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Identification and Genomic Analysis of a Novel Group C Orthobunyavirus Isolated from a Mosquito Captured near Iquitos, Peru von Treangen, Todd J, Schoeler, George, Phillippy, Adam M, Bergman, Nicholas H, Turell, Michael J

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Strand-specific RNA-seq reveals ordered patterns of sense and antisense transcription in Bacillus anthracis von Passalacqua, Karla D, Varadarajan, Anjana, Weist, Charlotte, Ondov, Brian D, Byrd, Benjamin, Read, Timothy D, Bergman, Nicholas H

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Biosynthetic Analysis of the Petrobactin Siderophore Pathway from Bacillus anthracis von JUNG YEOP LEE, JANES, Brian K, HANNA, Philip C, SHERMAN, David H, PASSALACQUA, Karla D, PFLEGER, Brian F, BERGMAN, Nicholas H, HAICHUAN LIU, HAKANSSON, Kristina, SOMU, Ravindranadh V, ALDRICH, Courtney C, CENDROWSKI, Stephen

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Formation and Composition of the Bacillus anthracis Endospore von HONGBIN LIU, BERGMAN, Nicholas H, YATES, John III, HANNA, Philip C, THOMASON, Brendan, SHALLOM, Shamira, HAZEN, Alyson, CROSSNO, Joseph, RASKO, David A, RAVEL, Jacques, READ, Timothy D, PETERSON, Scott N

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Transcriptional Profiling of the Bacillus anthracis Life Cycle In Vitro and an Implied Model for Regulation of Spore Formation von BERGMAN, Nicholas H, ANDERSON, Erica C, SWENSON, Ellen E, NIEMEYER, Matthew M, MIYOSHI, Amy D, HANNA, Philip C

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Transcriptional Profiling of Bacillus anthracis during Infection of Host Macrophages von Bergman, Nicholas H, Anderson, Erica C, Swenson, Ellen E, Janes, Brian K, Fisher, Nathan, Niemeyer, Matthew M, Miyoshi, Amy D, Hanna, Philip C

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Structural and functional analysis of AsbF: Origin of the stealth 3,4-dihydroxybenzoic acid subunit for petrobactin biosynthesis von Pfleger, Brian F, Kim, Youngchang, Nusca, Tyler D, Maltseva, Natalia, Lee, Jung Yeop, Rath, Christopher M, Scaglione, Jamie B, Janes, Brian K, Anderson, Erica C, Bergman, Nicholas H, Hanna, Philip C, Joachimiak, Andrzej, Sherman, David H

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The Superoxide Dismutases of Bacillus anthracis Do Not Cooperatively Protect against Endogenous Superoxide Stress von Passalacqua, Karla D, Bergman, Nicholas H, Herring-Palmer, Amy, Hanna, Philip

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Operon Prediction for Sequenced Bacterial Genomes without Experimental Information von Bergman, Nicholas H, Passalacqua, Karla D, Hanna, Philip C, Qin, Zhaohui S

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The Brief Case: A Fatal Case of Necrotizing Fasciitis Due to Multidrug-Resistant Acinetobacter baumannii von Matthews, Lindsey, Goodrich, Jennifer S, Weber, David J, Bergman, Nicholas H, Miller, Melissa B

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