Genomic characterization of metastatic breast cancers von Bertucci, François, Ng, Charlotte K. Y., Patsouris, Anne, Droin, Nathalie, Piscuoglio, Salvatore, Carbuccia, Nadine, Soria, Jean Charles, Dien, Alicia Tran, Adnani, Yahia, Kamal, Maud, Garnier, Séverine, Meurice, Guillaume, Jimenez, Marta, Dogan, Semih, Verret, Benjamin, Chaffanet, Max, Bachelot, Thomas, Campone, Mario, Lefeuvre, Claudia, Bonnefoi, Herve, Dalenc, Florence, Jacquet, Alexandra, De Filippo, Maria R., Babbar, Naveen, Birnbaum, Daniel, Filleron, Thomas, Le Tourneau, Christophe, André, Fabrice

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Spatial and temporal heterogeneity in high-grade serous ovarian cancer: a phylogenetic analysis von Schwarz, Roland F, Ng, Charlotte K Y, Cooke, Susanna L, Newman, Scott, Temple, Jillian, Piskorz, Anna M, Gale, Davina, Sayal, Karen, Murtaza, Muhammed, Baldwin, Peter J, Rosenfeld, Nitzan, Earl, Helena M, Sala, Evis, Jimenez-Linan, Mercedes, Parkinson, Christine A, Markowetz, Florian, Brenton, James D

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A comprehensive comparison of tools for fitting mutational signatures von Medo, Matúš, Ng, Charlotte K. Y., Medová, Michaela

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Patient-derived xenografts and organoids model therapy response in prostate cancer von Karkampouna, Sofia, La Manna, Federico, Benjak, Andrej, Kiener, Mirjam, De Menna, Marta, Zoni, Eugenio, Grosjean, Joël, Klima, Irena, Garofoli, Andrea, Bolis, Marco, Vallerga, Arianna, Theurillat, Jean-Philippe, De Filippo, Maria R., Genitsch, Vera, Keller, David, Booij, Tijmen H., Stirnimann, Christian U., Eng, Kenneth, Sboner, Andrea, Ng, Charlotte K. Y., Piscuoglio, Salvatore, Gray, Peter C., Spahn, Martin, Rubin, Mark A., Thalmann, George N., Kruithof-de Julio, Marianna

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Integrative proteogenomic characterization of hepatocellular carcinoma across etiologies and stages von Ng, Charlotte K. Y., Dazert, Eva, Boldanova, Tuyana, Coto-Llerena, Mairene, Nuciforo, Sandro, Ercan, Caner, Suslov, Aleksei, Meier, Marie-Anne, Bock, Thomas, Schmidt, Alexander, Ketterer, Sylvia, Wang, Xueya, Wieland, Stefan, Matter, Matthias S., Colombi, Marco, Piscuoglio, Salvatore, Terracciano, Luigi M., Hall, Michael N., Heim, Markus H.

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Multi-omics subtyping of hepatocellular carcinoma patients using a Bayesian network mixture model von Suter, Polina, Dazert, Eva, Kuipers, Jack, Ng, Charlotte K. Y, Boldanova, Tuyana, Hall, Michael N, Heim, Markus H, Beerenwinkel, Niko

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Discovery of synthetic lethal interactions from large-scale pan-cancer perturbation screens von Srivatsa, Sumana, Montazeri, Hesam, Bianco, Gaia, Coto-Llerena, Mairene, Marinucci, Mattia, Ng, Charlotte K. Y., Piscuoglio, Salvatore, Beerenwinkel, Niko

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Alterations in homologous recombination repair genes in prostate cancer brain metastases von Rodriguez-Calero, Antonio, Gallon, John, Akhoundova, Dilara, Maletti, Sina, Ferguson, Alison, Cyrta, Joanna, Amstutz, Ursula, Garofoli, Andrea, Paradiso, Viola, Tomlins, Scott A., Hewer, Ekkehard, Genitsch, Vera, Fleischmann, Achim, Vassella, Erik, Rushing, Elisabeth J., Grobholz, Rainer, Fischer, Ingeborg, Jochum, Wolfram, Cathomas, Gieri, Osunkoya, Adeboye O., Bubendorf, Lukas, Moch, Holger, Thalmann, George, Ng, Charlotte K. Y., Gillessen, Silke, Piscuoglio, Salvatore, Rubin, Mark A.

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Interferon lambda 4 impairs hepatitis C viral antigen presentation and attenuates T cell responses von Chen, Qian, Coto-Llerena, Mairene, Suslov, Aleksei, Teixeira, Raphael Dias, Fofana, Isabel, Nuciforo, Sandro, Hofmann, Maike, Thimme, Robert, Hensel, Nina, Lohmann, Volker, Ng, Charlotte K. Y., Rosenberger, George, Wieland, Stefan, Heim, Markus H.

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RAD52 resolves transcription-replication conflicts to mitigate R-loop induced genome instability von Jalan, Manisha, Sharma, Aman, Pei, Xin, Weinhold, Nils, Buechelmaier, Erika S., Zhu, Yingjie, Ahmed-Seghir, Sana, Ratnakumar, Abhirami, Di Bona, Melody, McDermott, Niamh, Gomez-Aguilar, Joan, Anderson, Kyrie S., Ng, Charlotte K. Y., Selenica, Pier, Bakhoum, Samuel F., Reis-Filho, Jorge S., Riaz, Nadeem, Powell, Simon N.

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Preoperative plasma fatty acid metabolites inform risk of prostate cancer progression and may be used for personalized patient stratification von Zoni, Eugenio, Minoli, Martina, Bovet, Cédric, Wehrhan, Anne, Piscuoglio, Salvatore, Ng, Charlotte K Y, Gray, Peter C, Spahn, Martin, Thalmann, George N, Kruithof-de Julio, Marianna

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Genomic landscape of adenoid cystic carcinoma of the breast von Martelotto, Luciano G, De Filippo, Maria R, Ng, Charlotte KY, Natrajan, Rachael, Fuhrmann, Laetitia, Cyrta, Joanna, Piscuoglio, Salvatore, Wen, Huei-Chi, Lim, Raymond S, Shen, Ronglai, Schultheis, Anne M, Wen, Y Hannah, Edelweiss, Marcia, Mariani, Odette, Stenman, Göran, Chan, Timothy A, Colombo, Pierre-Emmanuel, Norton, Larry, Vincent-Salomon, Anne, Reis-Filho, Jorge S, Weigelt, Britta

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Multi-omics data integration reveals novel drug targets in hepatocellular carcinoma von Dimitrakopoulos, Christos, Hindupur, Sravanth Kumar, Colombi, Marco, Liko, Dritan, Ng, Charlotte K. Y, Piscuoglio, Salvatore, Behr, Jonas, Moore, Ariane L, Singer, Jochen, Ruscheweyh, Hans-Joachim, Matter, Matthias S, Mossmann, Dirk, Terracciano, Luigi M, Hall, Michael N, Beerenwinkel, Niko

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MYBL1 rearrangements and MYB amplification in breast adenoid cystic carcinomas lacking the MYB–NFIB fusion gene von Kim, Jisun, Geyer, Felipe C, Martelotto, Luciano G, Ng, Charlotte KY, Lim, Raymond S, Selenica, Pier, Li, Anqi, Pareja, Fresia, Fusco, Nicola, Edelweiss, Marcia, Kumar, Rahul, Gularte‐Merida, Rodrigo, Forbes, Andre N, Khurana, Ekta, Mariani, Odette, Badve, Sunil, Vincent‐Salomon, Anne, Norton, Larry, Reis‐Filho, Jorge S, Weigelt, Britta

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Metastatic breast carcinomas display genomic and transcriptomic heterogeneity von Weigelt, Britta, Ng, Charlotte K Y, Shen, Ronglai, Popova, Tatiana, Schizas, Michail, Natrajan, Rachael, Mariani, Odette, Stern, Marc-Henri, Norton, Larry, Vincent-Salomon, Anne, Reis-Filho, Jorge S

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Genomic profiling of histological special types of breast cancer von Horlings, Hugo M., Weigelt, Britta, Anderson, Eric M., Lambros, Maryou B., Mackay, Alan, Natrajan, Rachael, Ng, Charlotte K. Y., Geyer, Felipe C., van de Vijver, Marc J., Reis-Filho, Jorge S.

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Expression of RET is associated with Oestrogen receptor expression but lacks prognostic significance in breast cancer von Mechera, Robert, Soysal, Savas D, Piscuoglio, Salvatore, Ng, Charlotte K Y, Zeindler, Jasmin, Mujagic, Edin, Däster, Silvio, Glauser, Philippe, Hoffmann, Henry, Kilic, Ergin, Droeser, Raoul A, Weber, Walter P, Muenst, Simone

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The protein histidine phosphatase LHPP is a tumour suppressor von Hindupur, Sravanth K., Colombi, Marco, Fuhs, Stephen R., Matter, Matthias S., Guri, Yakir, Adam, Kevin, Cornu, Marion, Piscuoglio, Salvatore, Ng, Charlotte K. Y., Betz, Charles, Liko, Dritan, Quagliata, Luca, Moes, Suzette, Jenoe, Paul, Terracciano, Luigi M., Heim, Markus H., Hunter, Tony, Hall, Michael N.

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Uterine adenosarcomas are mesenchymal neoplasms von Piscuoglio, Salvatore, Burke, Kathleen A, Ng, Charlotte KY, Papanastasiou, Anastasios D, Geyer, Felipe C, Macedo, Gabriel S, Martelotto, Luciano G, de Bruijn, Ino, De Filippo, Maria R, Schultheis, Anne M, Ioris, Rafael A, Levine, Douglas A, Soslow, Robert A, Rubin, Brian P, Reis-Filho, Jorge S, Weigelt, Britta

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Vascular endothelial growth factor A amplification in colorectal cancer is associated with reduced M1 and M2 macrophages and diminished PD-1-expressing lymphocytes von Burmeister, Katharina, Quagliata, Luca, Andreozzi, Mariacarla, Eppenberger-Castori, Serenella, Matter, Matthias S, Perrina, Valeria, Grobholz, Rainer, Jochum, Wolfram, Horber, Daniel, Moosmann, Peter, Lehmann, Frank, Köberle, Dieter, Ng, Charlotte K Y, Piscuoglio, Salvatore, Tornillo, Luigi, Terracciano, Luigi M

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