Rapid KRAS, EGFR, BRAF and PIK3CA mutation analysis of fine needle aspirates from non-small-cell lung cancer using allele-specific qPCR von van Eijk, Ronald, Licht, Jappe, Schrumpf, Melanie, Talebian Yazdi, Mehrdad, Ruano, Dina, Forte, Giusi I, Nederlof, Petra M, Veselic, Maud, Rabe, Klaus F, Annema, Jouke T, Smit, Vincent, Morreau, Hans, van Wezel, Tom

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Molecular Characterization of the Bacterial Communities in the Different Compartments of a Full-Scale Reverse-Osmosis Water Purification Plant von Bereschenko, L.A, Heilig, G.H.J, Nederlof, M.M, van Loosdrecht, M.C.M, Stams, A.J.M, Euverink, G.J.W

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Effect of temperature on the energy utilization efficiencies of digested protein, fat, and carbohydrates in Nile tilapia (Oreochromis niloticus) von Dey, B.K., Verdegem, M.C.J., Nederlof, M.A.J., Masagounder, K., Mas-Muñoz, J., Schrama, J.W.

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Triple-negative breast cancer: BRCAness and concordance of clinical features with BRCA1-mutation carriers von Lips, E H, Mulder, L, Oonk, A, van der Kolk, L E, Hogervorst, F B L, Imholz, A L T, Wesseling, J, Rodenhuis, S, Nederlof, P M

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An aCGH classifier derived from BRCA1-mutated breast cancer and benefit of high-dose platinum-based chemotherapy in HER2-negative breast cancer patients von Vollebergh, M.A., Lips, E.H., Nederlof, P.M., Wessels, L.F.A., Schmidt, M.K., van Beers, E.H., Cornelissen, S., Holtkamp, M., Froklage, F.E., de Vries, E.G.E., Schrama, J.G., Wesseling, J., van de Vijver, M.J., van Tinteren, H., de Bruin, M., Hauptmann, M., Rodenhuis, S., Linn, S.C.

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Genomic patterns resembling BRCA1- and BRCA2-mutated breast cancers predict benefit of intensified carboplatin-based chemotherapy von Vollebergh, Marieke A, Lips, Esther H, Nederlof, Petra M, Wessels, Lodewyk F A, Wesseling, Jelle, Vd Vijver, Marc J, de Vries, Elisabeth G E, van Tinteren, Harm, Jonkers, Jos, Hauptmann, Michael, Rodenhuis, Sjoerd, Linn, Sabine C

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Neoadjuvant chemotherapy in ER+ HER2− breast cancer: response prediction based on immunohistochemical and molecular characteristics von Lips, E. H., Mulder, L., de Ronde, J. J., Mandjes, I. A. M., Vincent, A., Vrancken Peeters, M. T. F. D., Nederlof, P. M., Wesseling, J., Rodenhuis, S.

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Next generation sequencing of triple negative breast cancer to find predictors for chemotherapy response von Lips, Esther H, Michaut, Magali, Hoogstraat, Marlous, Mulder, Lennart, Besselink, Nicolle J M, Koudijs, Marco J, Cuppen, Edwin, Voest, Emile E, Bernards, Rene, Nederlof, Petra M, Wesseling, Jelle, Rodenhuis, Sjoerd, Wessels, Lodewyk F A

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AACR Project GENIE: Powering Precision Medicine through an International Consortium von André, Fabrice, Arnedos, Monica, Baras, Alexander S., Baselga, José, Bedard, Philippe L., Berger, Michael F., Bierkens, Mariska, Calvo, Fabien, Cerami, Ethan, Chakravarty, Debyani, Dang, Kristen K., Davidson, Nancy E., Del Vecchio Fitz, Catherine, Dogan, Semih, DuBois, Raymond N., Ducar, Matthew D., Futreal, P. Andrew, Gao, Jianjiong, Garcia, Francisco, Gardos, Stu, Gocke, Christopher D., Gross, Benjamin E., Guinney, Justin, Heins, Zachary J., Hintzen, Stephanie, Horlings, Hugo, Hudeček, Jan, Hyman, David M., Kamel-Reid, Suzanne, Kandoth, Cyriac, Kinyua, Walter, Kumari, Priti, Kundra, Ritika, Ladanyi, Marc, Lefebvre, Céline, LeNoue-Newton, Michele L., Lepisto, Eva M., Levy, Mia A., Lindeman, Neal I., Lindsay, James, Liu, David, Lu, Zhibin, MacConaill, Laura E., Maurer, Ian, Maxwell, David S., Meijer, Gerrit A., Meric-Bernstam, Funda, Micheel, Christine M., Miller, Clinton, Mills, Gordon, Moore, Nathanael D., Nederlof, Petra M., Omberg, Larsson, Orechia, John A., Park, Ben Ho, Pugh, Trevor J., Reardon, Brendan, Rollins, Barrett J., Routbort, Mark J., Sawyers, Charles L., Schrag, Deborah, Schultz, Nikolaus, Shaw, Kenna R Mills, Shivdasani, Priyanka, Siu, Lillian L., Solit, David B., Sonke, Gabe S., Soria, Jean Charles, Sripakdeevong, Parin, Stickle, Natalie H., Stricker, Thomas P., Sweeney, Shawn M., Taylor, Barry S., ten Hoeve, Jelle J., Thomas, Stacy B., Van Allen, Eliezer M., Van 'T Veer, Laura J., van de Velde, Tony, van Tinteren, Harm, Velculescu, Victor E., Virtanen, Carl, Voest, Emile E., Wang, Lucy L., Wathoo, Chetna, Watt, Stuart, Yu, Celeste, Yu, Thomas V., Yu, Emily, Zehir, Ahmet, Zhang, Hongxin

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High Incidence of Protein-Truncating TP53 Mutations in BRCA1-Related Breast Cancer von HOLSTEGE, Henne, JOOSSE, Simon A, VAN OOSTROM, Conny Th. M, NEDERLOF, Petra M, DE VRIES, Annemieke, JONKERS, Jos

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A multiplex PCR predictor for aCGH success of FFPE samples von VAN BEERS, E. H, JOOSSE, S. A, LIGTENBERG, M. J, FLES, R, HOGERVORST, F. B. L, VERHOEF, S, NEDERLOF, P. M

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BRCAness digitalMLPA profiling predicts benefit of intensified platinum-based chemotherapy in triple-negative and luminal-type breast cancer von Lips, Esther H., Benard-Slagter, Anne, Opdam, Mark, Scheerman, Caroline E., Wesseling, Jelle, Hogervorst, Frans B. L., Linn, Sabine C., Savola, Suvi, Nederlof, Petra M.

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Comprehensive routine diagnostic screening to identify predictive mutations, gene amplifications, and microsatellite instability in FFPE tumor material von Steeghs, Elisabeth M. P., Kroeze, Leonie I., Tops, Bastiaan B. J., van Kempen, Leon C., ter Elst, Arja, Kastner-van Raaij, Annemiek W. M., Hendriks-Cornelissen, Sandra J. B., Hermsen, Mandy J. W., Jansen, Erik A. M., Nederlof, Petra M., Schuuring, Ed, Ligtenberg, Marjolijn J. L., Eijkelenboom, Astrid

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Long-term outcomes of young, node-negative, chemotherapy-naïve, triple-negative breast cancer patients according to BRCA1 status von Wang, Yuwei, Dackus, Gwen M H E, Rosenberg, Efraim H, Cornelissen, Sten, de Boo, Leonora W, Broeks, Annegien, Brugman, Wim, Chan, Terry W S, van Diest, Paul J, Hauptmann, Michael, Ter Hoeve, Natalie D, Isaeva, Olga I, de Jong, Vincent M T, Jóźwiak, Katarzyna, Kluin, Roelof J C, Kok, Marleen, Koop, Esther, Nederlof, Petra M, Opdam, Mark, Schouten, Philip C, Siesling, Sabine, van Steenis, Charlaine, Voogd, Adri C, Vreuls, Willem, Salgado, Roberto F, Linn, Sabine C, Schmidt, Marjanka K

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Recommendations for the clinical interpretation and reporting of copy number gains using gene panel NGS analysis in routine diagnostics von Eijkelenboom, Astrid, Tops, Bastiaan B. J., van den Berg, Anke, van den Brule, Adrianus J. C., Dinjens, Winand N. M., Dubbink, Hendrikus J., ter Elst, Arja, Geurts-Giele, Willemina R. R., Groenen, Patricia J. T. A., Groenendijk, Floris H., Heideman, Daniëlle A. M., Huibers, Manon M. H., Huijsmans, Cornelis J. J., Jeuken, Judith W. M., van Kempen, Léon C., Korpershoek, Esther, Kroeze, Leonie I., de Leng, Wendy W. J., van Noesel, Carel J. M., Speel, Ernst-Jan M., Vogel, Maartje J., van Wezel, Tom, Nederlof, Petra M., Schuuring, Ed, Ligtenberg, Marjolijn J. L.

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BRCA1 tumour suppression occurs via heterochromatin-mediated silencing von Zhu, Quan, Pao, Gerald M., Huynh, Alexis M., Suh, Hoonkyo, Tonnu, Nina, Nederlof, Petra M., Gage, Fred H., Verma, Inder M.

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Indicators of homologous recombination deficiency in breast cancer and association with response to neoadjuvant chemotherapy von Lips, E.H., Mulder, L., Hannemann, J., Laddach, N., Vrancken Peeters, M.T.F.D., van de Vijver, M.J., Wesseling, J., Nederlof, P.M., Rodenhuis, S.

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BRCA1 -Mutated Estrogen Receptor-Positive Breast Cancer Shows BRCAness, Suggesting Sensitivity to Drugs Targeting Homologous Recombination Deficiency von Lips, Esther H, Debipersad, Rashmie D, Scheerman, Caroline E, Mulder, Lennart, Sonke, Gabe S, van der Kolk, Lizet E, Wesseling, Jelle, Hogervorst, Frans B L, Nederlof, Petra M

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Quantitative copy number analysis by Multiplex Ligation-dependent Probe Amplification (MLPA) of BRCA1-associated breast cancer regions identifies BRCAness von Lips, Esther H, Laddach, Nadja, Savola, Suvi P, Vollebergh, Marieke A, Oonk, Anne M M, Imholz, Alex L T, Wessels, Lodewyk F A, Wesseling, Jelle, Nederlof, Petra M, Rodenhuis, Sjoerd

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BRCA1-mutated and basal-like breast cancers have similar aCGH profiles and a high incidence of protein truncating TP53 mutations von Holstege, Henne, Horlings, Hugo M, Velds, Arno, Langerød, Anita, Børresen-Dale, Anne-Lise, van de Vijver, Marc J, Nederlof, Petra M, Jonkers, Jos

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