Integration of genomic and proteomic analyses in the classification of the Siphoviridae family von Adriaenssens, Evelien M, Edwards, Rob, Nash, John H.E, Mahadevan, Padmanabhan, Seto, Donald, Ackermann, Hans-Wolfgang, Lavigne, Rob, Kropinski, Andrew M

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Supersize me: Cronobacter sakazakii phage GAP32 von Abbasifar, Reza, Griffiths, Mansel W, Sabour, Parviz M, Ackermann, Hans-Wolfgang, Vandersteegen, Katrien, Lavigne, Rob, Noben, Jean-Paul, Alanis Villa, Argentina, Abbasifar, Arash, Nash, John H.E, Kropinski, Andrew M

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MOB-suite: software tools for clustering, reconstruction and typing of plasmids from draft assemblies von Robertson, James, Nash, John H E

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Analysis of the Actinobacillus pleuropneumoniae ArcA Regulon Identifies Fumarate Reductase as a Determinant of Virulence von Buettner, Falk F.R, Bendallah, Ibrahim M, Bosse, Janine T, Dreckmann, Karla, Nash, John H.E, Langford, Paul R, Gerlach, Gerald-F

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Analysis of the Actinobacillus pleuropneumoniae HlyX (FNR) regulon and identification of iron-regulated protein B as an essential virulence factor von Buettner, Falk F.R, Bendalla, Ibrahim M, Bossé, Janine T, Meens, Jochen, Nash, John H.E, Härtig, Elisabeth, Langford, Paul R, Gerlach, Gerald-F

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The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies von Yoshida, Catherine E, Kruczkiewicz, Peter, Laing, Chad R, Lingohr, Erika J, Gannon, Victor P J, Nash, John H E, Taboada, Eduardo N

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Universal whole-sequence-based plasmid typing and its utility to prediction of host range and epidemiological surveillance von Robertson, James, Bessonov, Kyrylo, Schonfeld, Justin, Nash, John H E

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Epidemiology, Relative Invasive Ability, Molecular Characterization, and Competitive Performance of Campylobacter jejuni Strains in the Chicken Gut von Pope, Christopher, Wilson, Janet, Taboada, Eduardo N, MacKinnon, Joanne, Felipe Alves, Cristiano A, Nash, John H.E, Rahn, Kris, Tannock, Gerald W

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On-Farm Anaerobic Digestion of Dairy Manure Reduces the Abundance of Antibiotic Resistance-Associated Gene Targets and the Potential for Plasmid Transfer von Tran, Tam T, Scott, Andrew, Tien, Yuan-Ching, Murray, Roger, Boerlin, Patrick, Pearl, David L, Liu, Kira, Robertson, James, Nash, John H E, Topp, Edward

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Dissemination of the mcr-1 colistin resistance gene von Mulvey, Michael R, Mataseje, Laura F, Robertson, James, Nash, John H E, Boerlin, Patrick, Toye, Baldwin, Irwin, Rebecca, Melano, Roberto G

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ECTyper: in silico Escherichia coli serotype and species prediction from raw and assembled whole-genome sequence data von Bessonov, Kyrylo, Laing, Chad, Robertson, James, Yong, Irene, Ziebell, Kim, Gannon, Victor P J, Nichani, Anil, Arya, Gitanjali, Nash, John H E, Christianson, Sara

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Evaluation of Molecular Methods for Identification of Salmonella Serovars von Yoshida, Catherine, Gurnik, Simone, Ahmad, Aaminah, Blimkie, Travis, Murphy, Stephanie A, Kropinski, Andrew M, Nash, John H E

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Romulus and Remus, Two Phage Isolates Representing a Distinct Clade within the Twortlikevirus Genus, Display Suitable Properties for Phage Therapy Applications von Vandersteegen, Katrien, Kropinski, Andrew M, Nash, John H E, Noben, Jean-Paul, Hermans, Katleen, Lavigne, Rob

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Development of a multi-locus typing scheme for an Enterobacteriaceae linear plasmid that mediates inter-species transfer of flagella von Robertson, James, Lin, Janet, Wren-Hedgus, Amie, Arya, Gitanjali, Carrillo, Catherine, Nash, John H E

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Four Escherichia coli O157:H7 phages: a new bacteriophage genus and taxonomic classification of T1-like phages von Niu, Yan D, McAllister, Tim A, Nash, John H E, Kropinski, Andrew M, Stanford, Kim

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Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes von Nash, John He, Villegas, Andre, Kropinski, Andrew M, Aguilar-Valenzuela, Renan, Konczy, Paulina, Mascarenhas, Mariola, Ziebell, Kim, Torres, Alfredo G, Karmali, Mohamed A, Coombes, Brian K

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A global survey of Salmonella plasmids and their associations with antimicrobial resistance von Robertson, James, Schonfeld, Justin, Bessonov, Kyrylo, Bastedo, Patrick, Nash, John H E

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The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory von Yachison, Chris A, Yoshida, Catherine, Robertson, James, Nash, John H E, Kruczkiewicz, Peter, Taboada, Eduardo N, Walker, Matthew, Reimer, Aleisha, Christianson, Sara, Nichani, Anil, Nadon, Celine

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The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen von Reith, Michael E, Singh, Rama K, Curtis, Bruce, Boyd, Jessica M, Bouevitch, Anne, Kimball, Jennifer, Munholland, Janet, Murphy, Colleen, Sarty, Darren, Williams, Jason, Nash, John He, Johnson, Stewart C, Brown, Laura L

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An improved DNA array-based classification method for the identification of Salmonella serotypes shows high concordance between traditional and genotypic testing von Robertson, James, Yoshida, Catherine, Gurnik, Simone, McGrogan, Madison, Davis, Kristin, Arya, Gitanjali, Murphy, Stephanie A, Nichani, Anil, Nash, John H E

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