The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies von Yoshida, Catherine E, Kruczkiewicz, Peter, Laing, Chad R, Lingohr, Erika J, Gannon, Victor P J, Nash, John H E, Taboada, Eduardo N

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MOB-suite: software tools for clustering, reconstruction and typing of plasmids from draft assemblies von Robertson, James, Nash, John H E

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On-Farm Anaerobic Digestion of Dairy Manure Reduces the Abundance of Antibiotic Resistance-Associated Gene Targets and the Potential for Plasmid Transfer von Tran, Tam T, Scott, Andrew, Tien, Yuan-Ching, Murray, Roger, Boerlin, Patrick, Pearl, David L, Liu, Kira, Robertson, James, Nash, John H E, Topp, Edward

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Development of a multi-locus typing scheme for an Enterobacteriaceae linear plasmid that mediates inter-species transfer of flagella von Robertson, James, Lin, Janet, Wren-Hedgus, Amie, Arya, Gitanjali, Carrillo, Catherine, Nash, John H E

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Four Escherichia coli O157:H7 phages: a new bacteriophage genus and taxonomic classification of T1-like phages von Niu, Yan D, McAllister, Tim A, Nash, John H E, Kropinski, Andrew M, Stanford, Kim

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Universal whole-sequence-based plasmid typing and its utility to prediction of host range and epidemiological surveillance von Robertson, James, Bessonov, Kyrylo, Schonfeld, Justin, Nash, John H E

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Romulus and Remus, Two Phage Isolates Representing a Distinct Clade within the Twortlikevirus Genus, Display Suitable Properties for Phage Therapy Applications von Vandersteegen, Katrien, Kropinski, Andrew M, Nash, John H E, Noben, Jean-Paul, Hermans, Katleen, Lavigne, Rob

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Taxonomic reassessment of N4-like viruses using comparative genomics and proteomics suggests a new subfamily - “Enquartavirinae” von Wittmann, Johannes, Klumpp, Jochen, Moreno Switt, Andrea I, Yagubi, Abdelbaset, Ackermann, Hans-Wolfgang, Wiedmann, Martin, Svircev, Antonet, Nash, John H. E, Kropinski, Andrew M

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Host-Pathogen Interactions of Actinobacillus pleuropneumoniae with Porcine Lung and Tracheal Epithelial Cells von Auger, Eliane, Deslandes, Vincent, Ramjeet, Mahendrasingh, Contreras, Irazù, Nash, John H.E, Harel, Josée, Gottschalk, Marcelo, Olivier, Martin, Jacques, Mario

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An improved DNA array-based classification method for the identification of Salmonella serotypes shows high concordance between traditional and genotypic testing von Robertson, James, Yoshida, Catherine, Gurnik, Simone, McGrogan, Madison, Davis, Kristin, Arya, Gitanjali, Murphy, Stephanie A, Nichani, Anil, Nash, John H E

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ECTyper: in silico Escherichia coli serotype and species prediction from raw and assembled whole-genome sequence data von Bessonov, Kyrylo, Laing, Chad, Robertson, James, Yong, Irene, Ziebell, Kim, Gannon, Victor P J, Nichani, Anil, Arya, Gitanjali, Nash, John H E, Christianson, Sara

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Evaluation of Molecular Methods for Identification of Salmonella Serovars von Yoshida, Catherine, Gurnik, Simone, Ahmad, Aaminah, Blimkie, Travis, Murphy, Stephanie A, Kropinski, Andrew M, Nash, John H E

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Development and Validation of a Comparative Genomic Fingerprinting Method for High-Resolution Genotyping of Campylobacter jejuni von TABOADA, Eduardo N, ROSS, Susan L, GANNON, Victor P. J, MARSHALL, Barbara, POLLARI, Frank, CLARK, Clifford G, MUTSCHALL, Steven K, MACKINNON, Joanne M, ROBERTS, Michael J, BUCHANAN, Cody J, KRUCZKIEWICZ, Peter, JOKINEN, Cassandra C, THOMAS, James E, NASH, John H. E

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The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory von Yachison, Chris A, Yoshida, Catherine, Robertson, James, Nash, John H E, Kruczkiewicz, Peter, Taboada, Eduardo N, Walker, Matthew, Reimer, Aleisha, Christianson, Sara, Nichani, Anil, Nadon, Celine

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A proposed new bacteriophage subfamily: “Jerseyvirinae” von Anany, Hany, Switt, Andrea I. Moreno, De Lappe, Niall, Ackermann, Hans-Wolfgang, Reynolds, Darren M., Kropinski, Andrew M., Wiedmann, Martin, Griffiths, Mansel W., Tremblay, Denise, Moineau, Sylvain, Nash, John H. E., Turner, Dann

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The Complete Genome Sequence of Actinobacillus pleuropneumoniae L20 (Serotype 5b) von FOOTE, Simon J, BOSSE, Janine T, BOUEVITCH, Anne B, LANGFORD, Paul R, YOUNG, N. Martin, NASH, John H. E

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Effects of growth conditions on biofilm formation by Actinobacillus pleuropneumoniae von LABRIE, Josée, PELLETIER-JACQUES, Geneviève, DESLANDES, Vincent, RAMJEET, Mahendrasingh, AUGER, Eliane, NASH, John H. E, JACQUES, Mario

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Transcriptional profiling of Actinobacillus pleuropneumoniae during the acute phase of a natural infection in pigs von Deslandes, Vincent, Denicourt, Martine, Girard, Christiane, Harel, Josée, Nash, John H E, Jacques, Mario

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Analysis of the Actinobacillus pleuropneumoniae ArcA Regulon Identifies Fumarate Reductase as a Determinant of Virulence von Buettner, Falk F.R, Bendallah, Ibrahim M, Bosse, Janine T, Dreckmann, Karla, Nash, John H.E, Langford, Paul R, Gerlach, Gerald-F

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Mobility of β-Lactam Resistance Under Bacterial Co-infection and Ampicillin Treatment in a Mouse Model von Laskey, Alexander, Ottenbrite, Marie, Devenish, John, Kang, Mingsong, Savic, Mirjana, Nadin-Davis, Susan, Chmara, John, Lin, Min, Robertson, James, Bessonov, Kyrylo, Gurnik, Simone, Liu, Kira, Nash, John H E, Scott, Andrew, Topp, Edward, Guan, Jiewen

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