Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads von Kajitani, Rei, Toshimoto, Kouta, Noguchi, Hideki, Toyoda, Atsushi, Ogura, Yoshitoshi, Okuno, Miki, Yabana, Mitsuru, Harada, Masayuki, Nagayasu, Eiji, Maruyama, Haruhiko, Kohara, Yuji, Fujiyama, Asao, Hayashi, Tetsuya, Itoh, Takehiko

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The Genetic Basis of Morphological Diversity in Domesticated Goldfish von Kon, Tetsuo, Omori, Yoshihiro, Fukuta, Kentaro, Wada, Hironori, Watanabe, Masakatsu, Chen, Zelin, Iwasaki, Miki, Mishina, Tappei, Matsuzaki, Shin-ichiro S., Yoshihara, Daiki, Arakawa, Jumpei, Kawakami, Koichi, Toyoda, Atsushi, Burgess, Shawn M., Noguchi, Hideki, Furukawa, Takahisa

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MoG+: a database of genomic variations across three mouse subspecies for biomedical research von Takada, Toyoyuki, Fukuta, Kentaro, Usuda, Daiki, Kushida, Tatsuya, Kondo, Shinji, Kawamoto, Shoko, Yoshiki, Atsushi, Obata, Yuichi, Fujiyama, Asao, Toyoda, Atsushi, Noguchi, Hideki, Shiroishi, Toshihiko, Masuya, Hiroshi

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Transcriptomic comparison between populations selected for higher and lower mobility in the red flour beetle Tribolium castaneum von Matsumura, Kentarou, Onuma, Takafumi, Kondo, Shinji, Noguchi, Hideki, Uchiyama, Hironobu, Yajima, Shunsuke, Sasaki, Ken, Miyatake, Takahisa

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Mettl1-dependent m7G tRNA modification is essential for maintaining spermatogenesis and fertility in Drosophila melanogaster von Kaneko, Shunya, Miyoshi, Keita, Tomuro, Kotaro, Terauchi, Makoto, Tanaka, Ryoya, Kondo, Shu, Tani, Naoki, Ishiguro, Kei-Ichiro, Toyoda, Atsushi, Kamikouchi, Azusa, Noguchi, Hideki, Iwasaki, Shintaro, Saito, Kuniaki

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The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity von Hanschen, Erik R., Marriage, Tara N., Ferris, Patrick J., Hamaji, Takashi, Toyoda, Atsushi, Fujiyama, Asao, Neme, Rafik, Noguchi, Hideki, Minakuchi, Yohei, Suzuki, Masahiro, Kawai-Toyooka, Hiroko, Smith, David R., Sparks, Halle, Anderson, Jaden, Bakarić, Robert, Luria, Victor, Karger, Amir, Kirschner, Marc W., Durand, Pierre M., Michod, Richard E., Nozaki, Hisayoshi, Olson, Bradley J. S. C.

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Nintedanib induces gene expression changes in the lung of induced-rheumatoid arthritis–associated interstitial lung disease mice von Mikami, Shintaro, Miura, Yoko, Kondo, Shinji, Sakai, Kosuke, Nishimura, Hiroaki, Kyoyama, Hiroyuki, Moriyama, Gaku, Koyama, Nobuyuki, Noguchi, Hideki, Ohkubo, Hirotsugu, Kanazawa, Satoshi, Uematsu, Kazutsugu

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BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state von Xiao, Muran, Kondo, Shinji, Nomura, Masaki, Kato, Shinichiro, Nishimura, Koutarou, Zang, Weijia, Zhang, Yifan, Akashi, Tomohiro, Viny, Aaron, Shigehiro, Tsukasa, Ikawa, Tomokatsu, Yamazaki, Hiromi, Fukumoto, Miki, Tanaka, Atsushi, Hayashi, Yasutaka, Koike, Yui, Aoyama, Yumi, Ito, Hiromi, Nishikawa, Hiroyoshi, Kitamura, Toshio, Kanai, Akinori, Yokoyama, Akihiko, Fujiwara, Tohru, Goyama, Susumu, Noguchi, Hideki, Lee, Stanley C., Toyoda, Atsushi, Hinohara, Kunihiko, Abdel-Wahab, Omar, Inoue, Daichi

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Profiling a single-stranded DNA region within an rDNA segment that affects the loading of bacterial condensin von Yano, Koichi, Noguchi, Hideki, Niki, Hironori

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Comparative Metagenomics Revealed Commonly Enriched Gene Sets in Human Gut Microbiomes von Kurokawa, Ken, Itoh, Takehiko, Kuwahara, Tomomi, Oshima, Kenshiro, Toh, Hidehiro, Toyoda, Atsushi, Takami, Hideto, Morita, Hidetoshi, Sharma, Vineet K., Srivastava, Tulika P., Taylor, Todd D., Noguchi, Hideki, Mori, Hiroshi, Ogura, Yoshitoshi, Ehrlich, Dusko S., Itoh, Kikuji, Takagi, Toshihisa, Sakaki, Yoshiyuki, Hayashi, Tetsuya, Hattori, Masahira

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The ancestor of extant Japanese fancy mice contributed to the mosaic genomes of classical inbred strains von Takada, Toyoyuki, Ebata, Toshinobu, Noguchi, Hideki, Keane, Thomas M, Adams, David J, Narita, Takanori, Shin-I, Tadasu, Fujisawa, Hironori, Toyoda, Atsushi, Abe, Kuniya, Obata, Yuichi, Sakaki, Yoshiyuki, Moriwaki, Kazuo, Fujiyama, Asao, Kohara, Yuji, Shiroishi, Toshihiko

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MetaGene: prokaryotic gene finding from environmental genome shotgun sequences von Noguchi, Hideki, Park, Jungho, Takagi, Toshihisa

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A deeply branching thermophilic bacterium with an ancient acetyl-CoA pathway dominates a subsurface ecosystem von Takami, Hideto, Noguchi, Hideki, Takaki, Yoshihiro, Uchiyama, Ikuo, Toyoda, Atsushi, Nishi, Shinro, Chee, Gab-Joo, Arai, Wataru, Nunoura, Takuro, Itoh, Takehiko, Hattori, Masahira, Takai, Ken

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Chromosomal Aneuploidy Improves the Brewing Characteristics of Sake Yeast von Kadowaki, Masafumi, Fujimaru, Yuki, Taguchi, Seiga, Ferdouse, Jannatul, Sawada, Kazutaka, Kimura, Yuta, Terasawa, Yohei, Agrimi, Gennaro, Anai, Toyoaki, Noguchi, Hideki, Toyoda, Atsushi, Fujiyama, Asao, Akao, Takeshi, Kitagaki, Hiroshi

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Horizontal transfer of a plasmid possessing mcr-1 marked with a single nucleotide mutation between Escherichia coli isolates from community residents von Yamamoto, Yoshimasa, Higashi, Ayano, Ikawa, Kanoko, Hoang, Hoa Thi Thanh, Yamaguchi, Takahiro, Kawahara, Ryuji, Noguchi, Hideki, Nguyen, Thang Nam, Khong, Diep Thi, Tran, Hoa Thi

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Complete Genome Sequences of Three Phocaeicola vulgatus Strains Isolated from a Healthy Japanese Individual von Vu, Hanh, Muto, Yoshinori, Hayashi, Masahiro, Noguchi, Hideki, Tanaka, Kaori, Yamamoto, Yoshimasa

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Anisogamy evolved with a reduced sex-determining region in volvocine green algae von Hamaji, Takashi, Kawai-Toyooka, Hiroko, Uchimura, Haruka, Suzuki, Masahiro, Noguchi, Hideki, Minakuchi, Yohei, Toyoda, Atsushi, Fujiyama, Asao, Miyagishima, Shin-ya, Umen, James G., Nozaki, Hisayoshi

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Single-cell transcriptomics of the goldfish retina reveals genetic divergence in the asymmetrically evolved subgenomes after allotetraploidization von Kon, Tetsuo, Fukuta, Kentaro, Chen, Zelin, Kon-Nanjo, Koto, Suzuki, Kota, Ishikawa, Masakazu, Tanaka, Hikari, Burgess, Shawn M., Noguchi, Hideki, Toyoda, Atsushi, Omori, Yoshihiro

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MetaGene: prokaryotic gene finding from environmental genome shotgun sequences von Noguchi, Hideki, Park, Jungho, Takagi, Toshihisa

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Mitochondrial and plastid genomes of the colonial green alga Gonium pectorale give insights into the origins of organelle DNA architecture within the volvocales von Hamaji, Takashi, Smith, David R, Noguchi, Hideki, Toyoda, Atsushi, Suzuki, Masahiro, Kawai-Toyooka, Hiroko, Fujiyama, Asao, Nishii, Ichiro, Marriage, Tara, Olson, Bradley J S C, Nozaki, Hisayoshi

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