EMT is the dominant program in human colon cancer von Loboda, Andre, Nebozhyn, Michael V, Watters, James W, Buser, Carolyne A, Shaw, Peter Martin, Huang, Pearl S, Van't Veer, Laura, Tollenaar, Rob A E M, Jackson, David B, Agrawal, Deepak, Dai, Hongyue, Yeatman, Timothy J

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Pan-tumor genomic biomarkers for PD-1 checkpoint blockade-based immunotherapy von Cristescu, Razvan, Mogg, Robin, Ayers, Mark, Albright, Andrew, Murphy, Erin, Yearley, Jennifer, Sher, Xinwei, Liu, Xiao Qiao, Lu, Hongchao, Nebozhyn, Michael, Zhang, Chunsheng, Lunceford, Jared K, Joe, Andrew, Cheng, Jonathan, Webber, Andrea L, Ibrahim, Nageatte, Plimack, Elizabeth R, Ott, Patrick A, Seiwert, Tanguy Y, Ribas, Antoni, McClanahan, Terrill K, Tomassini, Joanne E, Loboda, Andrey, Kaufman, David

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A multigene mutation classification of 468 colorectal cancers reveals a prognostic role for APC von Schell, Michael J., Yang, Mingli, Teer, Jamie K., Lo, Fang Yin, Madan, Anup, Coppola, Domenico, Monteiro, Alvaro N. A., Nebozhyn, Michael V., Yue, Binglin, Loboda, Andrey, Bien-Willner, Gabriel A., Greenawalt, Danielle M., Yeatman, Timothy J.

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An integrative gene expression signature analysis identifies CMS4 KRAS-mutated colorectal cancers sensitive to combined MEK and SRC targeted therapy von Yang, Mingli, Davis, Thomas B, Pflieger, Lance, Nebozhyn, Michael V, Loboda, Andrey, Wang, Heiman, Schell, Michael J, Thota, Ramya, Pledger, W Jack, Yeatman, Timothy J

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A gene expression signature of RAS pathway dependence predicts response to PI3K and RAS pathway inhibitors and expands the population of RAS pathway activated tumors von Loboda, Andrey, Nebozhyn, Michael, Klinghoffer, Rich, Frazier, Jason, Chastain, Michael, Arthur, William, Roberts, Brian, Zhang, Theresa, Chenard, Melissa, Haines, Brian, Andersen, Jannik, Nagashima, Kumiko, Paweletz, Cloud, Lynch, Bethany, Feldman, Igor, Dai, Hongyue, Huang, Pearl, Watters, James

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Repurposing EGFR Inhibitor Utility in Colorectal Cancer in Mutant APC and TP53 Subpopulations von Yang, Mingli, Schell, Michael J, Loboda, Andrey, Nebozhyn, Michael, Li, Jiannong, Teer, Jamie K, Pledger, W Jack, Yeatman, Timothy J

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Phase II Trial of Vorinostat in Recurrent Glioblastoma Multiforme: A North Central Cancer Treatment Group Study von GALANIS, Evanthia, JAECKLE, Kurt A, RICHON, Victoria M, SCHEITHAUER, Bernd, GIANNINI, Caterina, FLYNN, Patrick J, MOORE, Dennis F, ZWIEBEL, James, BUCKNER, Jan C, MAURER, Matthew J, REID, Joel M, AMES, Matthew M, HARDWICK, James S, REILLY, John F, LOBODA, Andrey, NEBOZHYN, Michael, FANTIN, Valeria R

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A Composite Gene Expression Signature Optimizes Prediction of Colorectal Cancer Metastasis and Outcome von Schell, Michael J, Yang, Mingli, Missiaglia, Edoardo, Delorenzi, Mauro, Soneson, Charlotte, Yue, Binglin, Nebozhyn, Michael V, Loboda, Andrey, Bloom, Gregory, Yeatman, Timothy J

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Combining multi-species genomic data for microRNA identification using a Naïve Bayes classifier von Yousef, Malik, Nebozhyn, Michael, Shatkay, Hagit, Kanterakis, Stathis, Showe, Louise C., Showe, Michael K.

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Molecular insights into the pathogenesis of Alzheimer's disease and its relationship to normal aging von Podtelezhnikov, Alexei A, Tanis, Keith Q, Nebozhyn, Michael, Ray, William J, Stone, David J, Loboda, Andrey P

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Microarray data on gene modulation by HIV-1 in immune cells: 2000–2006 von Giri, Malavika S., Nebozhyn, Michael, Showe, Louise, Montaner, Luis J.

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Association between gene expression signatures and clinical outcomes of pembrolizumab versus paclitaxel in advanced gastric cancer: exploratory analysis from the randomized, contro... von Shitara, Kohei, Di Bartolomeo, Maria, Mandala, Mario, Ryu, Min-Hee, Caglevic, Christian, Olesinski, Tomasz, Chung, Hyun Cheol, Muro, Kei, Goekkurt, Eray, McDermott, Raymond S, Mansoor, Wasat, Wainberg, Zev A, Shih, Chie-Schin, Kobie, Julie, Nebozhyn, Michael, Cristescu, Razvan, Cao, Z Alexander, Loboda, Andrey, Özgüroğlu, Mustafa

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Chromatin Profiling of Epstein-Barr Virus Latency Control Region von DAY, Latasha, CHAU, Charles M, NEBOZHYN, Michael, RENNEKAMP, Andrew J, SHOWE, Michael, LIEBERMAN, Paul M

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High Levels of Expression of P-glycoprotein/Multidrug Resistance Protein Result in Resistance to Vintafolide von Guertin, Amy D, O'Neil, Jennifer, Stoeck, Alexander, Reddy, Joseph A, Cristescu, Razvan, Haines, Brian B, Hinton, Marlene C, Dorton, Ryan, Bloomfield, Alicia, Nelson, Melissa, Vetzel, Marilynn, Lejnine, Serguei, Nebozhyn, Michael, Zhang, Theresa, Loboda, Andrey, Picard, Kristen L, Schmidt, Emmett V, Dussault, Isabelle, Leamon, Christopher P

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IFN-γ-related mRNA profile predicts clinical response to PD-1 blockade von Ayers, Mark, Lunceford, Jared, Nebozhyn, Michael, Murphy, Erin, Loboda, Andrey, Kaufman, David R, Albright, Andrew, Cheng, Jonathan D, Kang, S Peter, Shankaran, Veena, Piha-Paul, Sarina A, Yearley, Jennifer, Seiwert, Tanguy Y, Ribas, Antoni, McClanahan, Terrill K

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Diurnal variation of the human adipose transcriptome and the link to metabolic disease von Loboda, Andrey, Kraft, Walter K, Fine, Bernard, Joseph, Jeffrey, Nebozhyn, Michael, Zhang, Chunsheng, He, Yudong, Yang, Xia, Wright, Christopher, Morris, Mark, Chalikonda, Ira, Ferguson, Mark, Emilsson, Valur, Leonardson, Amy, Lamb, John, Dai, Hongyue, Schadt, Eric, Greenberg, Howard E, Lum, Pek Yee

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A 10-Gene Classifier for Distinguishing Head and Neck Squamous Cell Carcinoma and Lung Squamous Cell Carcinoma von VACHANI, Anil, NEBOZHYN, Michael, LITZKY, Leslie A, KUCHARCZUK, John, KAISER, Larry R, MARRON, J. Stephen, SHOWE, Michael K, ALBELDA, Steven M, SHOWE, Louise C, SINGHAL, Sunil, ALILA, Linda, WAKEAM, Elliot, MUSCHEL, Ruth, POWELL, Charles A, GAFFNEY, Patrick, SINGH, Bhuvanesh, BROSE, Marcia S

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Molecular analysis of gastric cancer identifies subtypes associated with distinct clinical outcomes von Cristescu, Razvan, Lee, Jeeyun, Nebozhyn, Michael, Kim, Kyoung-Mee, Ting, Jason C, Wong, Swee Seong, Liu, Jiangang, Yue, Yong Gang, Wang, Jian, Yu, Kun, Ye, Xiang S, Do, In-Gu, Liu, Shawn, Gong, Lara, Fu, Jake, Jin, Jason Gang, Choi, Min Gew, Sohn, Tae Sung, Lee, Joon Ho, Bae, Jae Moon, Kim, Seung Tae, Park, Se Hoon, Sohn, Insuk, Jung, Sin-Ho, Tan, Patrick, Chen, Ronghua, Hardwick, James, Kang, Won Ki, Ayers, Mark, Hongyue, Dai, Reinhard, Christoph, Loboda, Andrey, Kim, Sung, Aggarwal, Amit

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Unique Ectopic Lymph Node-Like Structures Present in Human Primary Colorectal Carcinoma Are Identified by Immune Gene Array Profiling von Coppola, Domenico, Nebozhyn, Michael, Khalil, Farah, Dai, Hongyue, Yeatman, Timothy, Loboda, Andrey, Mulé, James J

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Transcriptomic Determinants of Response to Pembrolizumab Monotherapy across Solid Tumor Types von Cristescu, Razvan, Nebozhyn, Michael, Zhang, Chunsheng, Albright, Andrew, Kobie, Julie, Huang, Lingkang, Zhao, Qing, Wang, Anran, Ma, Hua, Alexander Cao, Z, Morrissey, Michael, Ribas, Antoni, Grivas, Petros, Cescon, David W, McClanahan, Terrill K, Snyder, Alexandra, Ayers, Mark, Lunceford, Jared, Loboda, Andrey

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