THE MAMMALIAN CIRCADIAN CLOCK: GENE REGULATORY NETWORK AND THEIR COMPUTER ANALYSIS von O. A. Podkolodnaya, N. N. Podkolodnaya, N. L. Podkolodnyy

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GeneNet in 2005 von Ananko, E. A., Podkolodny, N. L., Stepanenko, I. L., Podkolodnaya, O. A., Rasskazov, D. A., Miginsky, D. S., Likhoshvai, V. A., Ratushny, A. V., Podkolodnaya, N. N., Kolchanov, N. A.

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Biomedical and candidate SN P markers of chronopathologies can significantly change affinity of ТАТА -binding protein for human gene promoters von D. A. Rasskazov, N. L. Podkolodnyy, O. A. Podkolodnaya, N. N. Podkolodnaya, V. V. Suslov, L. K. Savinkova, P. M. Ponomarenko, M. P. Ponomarenko

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The effects of SN Ps in the regions of positioning RNA polymerase II on the TBP/promoter affinity in the genes of human circadian clock von O. A. Podkolodnaya, D. A. Rasskazov, N. L. Podkolodnyy, N. N. Podkolodnaya, V. V. Suslov, L. K. Savinkova, P. M. Ponomarenko, M. P. Ponomarenko

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Effects of SNPs in the positioning regions of RNA polymerase II on the TBP/promoter affinity in genes of the human circadian clock von Podkolodnaya, O. A., Rasskazov, D. A., Podkolodnyy, N. L., Podkolodnaya, N. N., Suslov, V. V., Savinkova, L. K., Ponomarenko, P. M., Ponomarenko, M. P.

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DISTRIBUTED RESTful WEB SERVICES FOR RECONSTRUCTION AND ANALYSIS OF GENE NETWORKS von N. L. Podkolodnyy, A. V. Semenychev, D. A. Rasskazov, V. G. Borowsky, E. A. Ananko, E. V. Ignatieva, N. N. Podkolodnaya, O. A. Podkolodnaya, N. A. Kolchanov

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The mammalian circadian clock: Gene regulatory network and computer analysis von Podkolodnaya, O. A., Podkolodnaya, N. N., Podkolodnyy, N. L.

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Subschema in the ‘Antivirus response’ diagram von E. A. Ananko, N. L. Podkolodny, I. L. Stepanenko, O. A. Podkolodnaya, D. A. Rasskazov, D. S. Miginsky, V. A. Likhoshvai, A. V. Ratushny, N. N. Podkolodnaya, N. A. Kolchanov

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Human_SNP_TATAdb: a database of SNPs that statistically significantly change the affinity of the TATA-binding protein to human gene promoters: genome-wide analysis and use cases von Filonov, S V, Podkolodnyy, N L, Podkolodnaya, O A, Tverdokhleb, N N, Ponomarenko, P M, Rasskazov, D A, Bogomolov, A G, Ponomarenko, M P

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On a Numerical Model of a Circadian Oscillator von Akinshin, A. A, Ayupova, N. B, Golubyatnikov, V. P, Kirillova, N. E, Podkolodnaya, O. A, Podkolodnyy, N. L

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Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL von Heinemeyer, T., Wingender, E., Reuter, I., Hermjakob, H., Kel, A. E., Kel, O. V., Ignatieva, E. V., Ananko, E. A., Podkolodnaya, O. A., Kolpakov, F. A., Podkolodny, N. L., Kolchanov, N. A.

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Computational modeling of the cell-autonomous mammalian circadian oscillator von Podkolodnaya, Olga A, Tverdokhleb, Natalya N, Podkolodnyy, Nikolay L

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Detection and analysis of dynamic patterns of diurnal expression of mammalian genes von Podkolodnaya, O. V., Tverdokhleb, N. N., Podkolodnyy, N. L.

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Erratum to: On a Numerical Model of a Circadian Oscillator von Akinshin, A. A, Ayupova, N. B, Golubyatnikov, V. P, Kirillova, N. E, Podkolodnaya, O. A, Podkolodnyy, N. L

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Promoters of genes encoding β-amylase, albumin and globulin in food plants have weaker affinity for TATA-binding protein as compared to non-food plants: in silico analysis von Vishnevsky, O V, Chadaeva, I V, Sharypova, E B, Khandaev, B M, Zolotareva, K A, Kazachek, A V, Ponomarenko, P M, Podkolodny, N L, Rasskazov, D A, Bogomolov, A G, Podkolodnaya, O A, Savinkova, L K, Zemlyanskaya, E V, Ponomarenko, M P

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On Conditions for the Existence of Cycles in Two Models of a Circadian Oscillator of Mammals von Golubyatnikov, V. P., Podkolodnaya, O. A., Podkolodnyy, N. L., Ayupova, N. B., Kirillova, N. E., Yunosheva, E. V.

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Transcription Regulatory Regions Database (TRRD): its status in 2002 von Kolchanov, N A, Ignatieva, E V, Ananko, E A, Podkolodnaya, O A, Stepanenko, I L, Merkulova, T I, Pozdnyakov, M A, Podkolodny, N L, Naumochkin, A N, Romashchenko, A G

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Nucleosome formation potential of eukaryotic DNA: calculation and promoters analysis von Levitsky, Victor G., Podkolodnaya, Olga A., Kolchanov, Nikolay A., Podkolodny, Nikolay L.

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Analysis of the circadian rhythm of biological processes in mouse liver and kidney von Podkolodnyy, I. N., Tverdokhleb, N. N., Podkolodnaya, O. A.

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Computational model of circadian oscillator in mammals: Interaction with NAD+/SIRT1 system and age-related changes in the expression of circadian oscillator genes von Podkolodnyy, N. L., Tverdokhleb, N. N., Podkolodnaya, O. A.

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