Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq analysis von Li, Xiangjie, Wang, Kui, Lyu, Yafei, Pan, Huize, Zhang, Jingxiao, Stambolian, Dwight, Susztak, Katalin, Reilly, Muredach P., Hu, Gang, Li, Mingyao

Volltext

Single-Cell Genomics Reveals a Novel Cell State During Smooth Muscle Cell Phenotypic Switching and Potential Therapeutic Targets for Atherosclerosis in Mouse and Human von Pan, Huize, Xue, Chenyi, Auerbach, Benjamin J., Fan, Jiaxin, Bashore, Alexander C., Cui, Jian, Yang, Dina Y., Trignano, Sarah B., Liu, Wen, Shi, Jianting, Ihuegbu, Chinyere O., Bush, Erin C., Worley, Jeremy, Vlahos, Lukas, Laise, Pasquale, Solomon, Robert A., Connolly, Edward S., Califano, Andrea, Sims, Peter A., Zhang, Hanrui, Li, Mingyao, Reilly, Muredach P.

Volltext

Cholesterol Efflux Pathways Suppress Inflammasome Activation, NETosis, and Atherogenesis von Westerterp, Marit, Fotakis, Panagiotis, Ouimet, Mireille, Bochem, Andrea E, Zhang, Hanrui, Molusky, Matthew M, Wang, Wei, Abramowicz, Sandra, la Bastide-van Gemert, Sacha, Wang, Nan, Welch, Carrie L, Reilly, Muredach P, Stroes, Erik S, Moore, Kathryn J, Tall, Alan R

Volltext

ASEP: Gene-based detection of allele-specific expression across individuals in a population by RNA sequencing von Fan, Jiaxin, Hu, Jian, Xue, Chenyi, Zhang, Hanrui, Susztak, Katalin, Reilly, Muredach P, Xiao, Rui, Li, Mingyao

Volltext

Circadian control of innate immunity in macrophages by miR-155 targeting Bmal1 von Curtis, Anne M, Fagundes, Caio T, Yang, Guangrui, Palsson-McDermott, Eva M, Wochal, Paulina, McGettrick, Anne F, Foley, Niamh H, Early, James O, Chen, Lihong, Zhang, Hanrui, Xue, Chenyi, Geiger, Sarah S, Hokamp, Karsten, Reilly, Muredach P, Coogan, Andrew N, Vigorito, Elena, FitzGerald, Garret A, O'Neill, Luke A J

Volltext

A guide to genome-wide association analysis and post-analytic interrogation von Reed, Eric, Nunez, Sara, Kulp, David, Qian, Jing, Reilly, Muredach P., Foulkes, Andrea S.

Volltext

Relationship of Estimated GFR and Coronary Artery Calcification in the CRIC (Chronic Renal Insufficiency Cohort) Study von Budoff, Matthew J., MD, Rader, Daniel J., MD, Reilly, Muredach P., MD, Mohler, Emile R., MD, Lash, Jim, MD, Yang, Wei, PhD, Rosen, Leigh, MUEP, Glenn, Melanie, MPH, Teal, Valerie, MS, Feldman, Harold I., MD

Volltext

Inflammation and Circulating Natriuretic Peptide Levels von Fish-Trotter, Hannah, Ferguson, Jane F., Patel, Nirav, Arora, Pankaj, Allen, Norrina B., Bachmann, Katherine N., Daniels, Lori B., Reilly, Muredach P., Lima, Joao A.C., Wang, Thomas J., Gupta, Deepak K.

Volltext

Interleukin-6 Is a Risk Factor for Atrial Fibrillation in Chronic Kidney Disease: Findings from the CRIC Study von Amdur, Richard L, Mukherjee, Monica, Go, Alan, Barrows, Ian R, Ramezani, Ali, Shoji, Jun, Reilly, Muredach P, Gnanaraj, Joseph, Deo, Raj, Roas, Sylvia, Keane, Martin, Master, Steve, Teal, Valerie, Soliman, Elsayed Z, Yang, Peter, Feldman, Harold, Kusek, John W, Tracy, Cynthia M, Raj, Dominic S

Volltext

Adipose Inflammation, Insulin Resistance, and Cardiovascular Disease von Shah, Arti, Mehta, Nehal, Reilly, Muredach P.

Volltext

Experimental Endotoxemia Induces Adipose Inflammation and Insulin Resistance in Humans von MEHTA, Nehal N, MCGILLICUDDY, Fiona C, ANDERSON, Paul D, HINKLE, Christine C, SHAH, Rachana, PRUSCINO, Leticia, TABITA-MARTINEZ, Jennifer, SELLERS, Kim F, RICKELS, Michael R, REILLY, Muredach P

Volltext

Evaluating the impact of sequencing depth on transcriptome profiling in human adipose von Liu, Yichuan, Ferguson, Jane F, Xue, Chenyi, Silverman, Ian M, Gregory, Brian, Reilly, Muredach P, Li, Mingyao

Volltext

GlycA Is a Novel Biomarker of Inflammation and Subclinical Cardiovascular Disease in Psoriasis von Joshi, Aditya A, Lerman, Joseph B, Aberra, Tsion M, Afshar, Mehdi, Teague, Heather L, Rodante, Justin A, Krishnamoorthy, Parasuram, Ng, Qimin, Aridi, Tarek Z, Salahuddin, Taufiq, Natarajan, Balaji, Lockshin, Benjamin N, Ahlman, Mark A, Chen, Marcus Y, Rader, Daniel J, Reilly, Muredach P, Remaley, Alan T, Bluemke, David A, Playford, Martin P, Gelfand, Joel M, Mehta, Nehal N

Volltext

Plasma lipoprotein(a) levels are associated with mild renal impairment in type 2 diabetics independent of albuminuria von Lin, Jennie, Reilly, Muredach P, Terembula, Karen, Wilson, F Perry

Volltext

Resistin is an inflammatory marker of atherosclerosis in humans von REILLY, Muredach P, LEHRKE, Michael, WOLFE, Megan L, ROHATGI, Anand, LAZAR, Mitchell A, RADER, Daniel J

Volltext

Plasma Apolipoprotein C-III Levels, Triglycerides, and Coronary Artery Calcification in Type 2 Diabetics von Qamar, Arman, Khetarpal, Sumeet A, Khera, Amit V, Qasim, Atif, Rader, Daniel J, Reilly, Muredach P

Volltext

The ABO histo-blood group, endothelial activation, and acute respiratory distress syndrome risk in critical illness von Reilly, John P, Meyer, Nuala J, Shashaty, Michael Gs, Anderson, Brian J, Ittner, Caroline, Dunn, Thomas G, Lim, Brian, Forker, Caitlin, Bonk, Michael P, Kotloff, Ethan, Feng, Rui, Cantu, Edward, Mangalmurti, Nilam S, Calfee, Carolyn S, Matthay, Michael A, Mikacenic, Carmen, Walley, Keith R, Russell, James, Christiani, David C, Wurfel, Mark M, Lanken, Paul N, Reilly, Muredach P, Christie, Jason D

Volltext

Inflammation Impairs Reverse Cholesterol Transport In Vivo von MCGILLICUDDY, Fiona C, DE LA LIERA MOYA, Margarita, HINKLE, Christine C, JOSHI, Michelle R, CHIQUOINE, Elise H, BILLHEIMER, Jeffrey T, ROTHBLAT, George H, REILLY, Muredach P

Volltext

Metabolic Effects of CX3CR1 Deficiency in Diet-Induced Obese Mice von Shah, Rachana, O'Neill, Sean M, Hinkle, Christine, Caughey, Jennifer, Stephan, Stephen, Lynch, Emma, Bermingham, Kate, Lynch, Gina, Ahima, Rexford S, Reilly, Muredach P

Volltext

Understanding the Link Between Obesity and Severe COVID-19 Outcomes: Causal Mediation by Systemic Inflammatory Response von Foulkes, Andrea S, Selvaggi, Caitlin, Shinnick, Daniel, Lumish, Heidi, Kim, Eunyoung, Cao, Tingyi, Thaweethai, Tanayott, Qian, Jing, Lu, Frances, Yan, Joyce, Cheng, David, He, Wei, Clerkin, Kevin J, Madhavan, Mahesh V, Meigs, James B, Triant, Virginia A, Lubitz, Steven A, Gupta, Aakriti, Bassett, Ingrid V, Reilly, Muredach P

Volltext