Signaling hypergraphs von Ritz, Anna, Tegge, Allison N, Kim, Hyunju, Poirel, Christopher L, Murali, T.M

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Supervised learning and prediction of physical interactions between human and HIV proteins von Dyer, Matthew D., Murali, T.M., Sobral, Bruno W.

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A Comparative Study of Genome-Wide Transcriptional Profiles of Primary Hepatocytes in Collagen Sandwich and Monolayer Cultures von Kim, Yeonhee, Lasher, Christopher D., Milford, Logan M., Murali, T.M., Rajagopalan, Padmavathy

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Reverse Engineering Molecular Hypergraphs von Rahman, Ahsanur, Poirel, Christopher L., Badger, David J., Estep, Craig, Murali, T. M.

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Gene regulatory network inference in single-cell biology von Akers, Kyle, Murali, T.M.

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Special Issue: 9th International Computational Advances in Bio and Medical Sciences (ICCABS 2019) von Mandoiu, Ion, Murali, T. M., Narasimhan, Giri, Rajasekaran, Sanguthevar, Skums, Pavel, Zelikovsky, Alexander

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XTalkDB: a database of signaling pathway crosstalk von Sam, Sarah A, Teel, Joelle, Tegge, Allison N, Bharadwaj, Aditya, Murali, T M

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Generalisable long COVID subtypes: findings from the NIH N3C and RECOVER programmes von Reese, Justin T., Blau, Hannah, Casiraghi, Elena, Bergquist, Timothy, Loomba, Johanna J., Callahan, Tiffany J., Laraway, Bryan, Antonescu, Corneliu, Coleman, Ben, Gargano, Michael, Wilkins, Kenneth J., Cappelletti, Luca, Fontana, Tommaso, Ammar, Nariman, Antony, Blessy, Murali, T.M., Caufield, J. Harry, Karlebach, Guy, McMurry, Julie A., Williams, Andrew, Moffitt, Richard, Banerjee, Jineta, Solomonides, Anthony E., Davis, Hannah, Kostka, Kristin, Valentini, Giorgio, Sahner, David, Chute, Christopher G., Madlock-Brown, Charisse, Haendel, Melissa A., Robinson, Peter N., Spratt, Heidi, Visweswaran, Shyam, Flack, Joseph Eugene, Yoo, Yun Jae, Gabriel, Davera, Alexander, G. Caleb, Mehta, Hemalkumar B., Liu, Feifan, Miller, Robert T., Wong, Rachel, Hill, Elaine L., Thorpe, Lorna E., Divers, Jasmin

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Computationally Driven Experimental Biology von Murali, T M

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Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin von Ruscio, Jory Z, Kumar, Deept, Shukla, Maulik, Prisant, Michael G, Murali, T.M, Onufriev, Alexey V

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Predictive models of long COVID von Antony, Blessy, Blau, Hannah, Casiraghi, Elena, Loomba, Johanna J, Callahan, Tiffany J, Laraway, Bryan J, Wilkins, Kenneth J, Antonescu, Corneliu C, Valentini, Giorgio, Williams, Andrew E, Robinson, Peter N, Reese, Justin T, Murali, T M

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Transcriptomic Analysis of Hepatic Cells in Multicellular Organotypic Liver Models von Tegge, Allison N., Rodrigues, Richard R., Larkin, Adam L., Vu, Lucas, Murali, T. M., Rajagopalan, Padmavathy

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Designing a Multicellular Organotypic 3D Liver Model with a Detachable, Nanoscale Polymeric Space of Disse von Larkin, Adam L., Rodrigues, Richard R., Murali, T.M., Rajagopalan, Padmavathy

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Systems biology characterization of engineered tissues von Rajagopalan, Padmavathy, Kasif, Simon, Murali, T M

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Network-based prediction and analysis of HIV dependency factors von Murali, T M, Dyer, Matthew D, Badger, David, Tyler, Brett M, Katze, Michael G

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Guest Editor's Introduction: Computationally Driven Experimental Biology von Murali, T.M.

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Predictive models of long COVIDResearch in context von Blessy Antony, Hannah Blau, Elena Casiraghi, Johanna J. Loomba, Tiffany J. Callahan, Bryan J. Laraway, Kenneth J. Wilkins, Corneliu C. Antonescu, Giorgio Valentini, Andrew E. Williams, Peter N. Robinson, Justin T. Reese, T.M. Murali, Christopher Chute

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RankGene: identification of diagnostic genes based on expression data von SU, Yang, MURALI, T. M, PAVLOVIC, Vladimir, SCHAFFER, Michael, KASIF, Simon

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Top-down network analysis to drive bottom-up modeling of physiological processes von Poirel, Christopher L, Rodrigues, Richard R, Chen, Katherine C, Tyson, John J, Murali, T M

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Generalisable long COVID subtypes: Findings from the NIH N3C and RECOVER programmesResearch in context von Justin T. Reese, Hannah Blau, Elena Casiraghi, Timothy Bergquist, Johanna J. Loomba, Tiffany J. Callahan, Bryan Laraway, Corneliu Antonescu, Ben Coleman, Michael Gargano, Kenneth J. Wilkins, Luca Cappelletti, Tommaso Fontana, Nariman Ammar, Blessy Antony, T.M. Murali, J. Harry Caufield, Guy Karlebach, Julie A. McMurry, Andrew Williams, Richard Moffitt, Jineta Banerjee, Anthony E. Solomonides, Hannah Davis, Kristin Kostka, Giorgio Valentini, David Sahner, Christopher G. Chute, Charisse Madlock-Brown, Melissa A. Haendel, Peter N. Robinson, Heidi Spratt, Shyam Visweswaran, Joseph Eugene Flack, IV, Yun Jae Yoo, Davera Gabriel, G. Caleb Alexander, Hemalkumar B. Mehta, Feifan Liu, Robert T. Miller, Rachel Wong, Elaine L. Hill, Lorna E. Thorpe, Jasmin Divers

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