PirVP genes causing AHPND identified in a new Vibrio species (Vibrio punensis) within the commensal Orientalis clade von Restrepo, Leda, Bayot, Bonny, Arciniegas, Sebastián, Bajaña, Leandro, Betancourt, Irma, Panchana, Fanny, Reyes Muñoz, Alejandro

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The gut microbiota of chickens in a commercial farm treated with a Salmonella phage cocktail von Clavijo, Viviana, Morales, Tatiana, Vives-Flores, Martha Josefina, Reyes Muñoz, Alejandro

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VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models von Rangel-Pineros, Guillermo, Almeida, Alexandre, Beracochea, Martin, Sakharova, Ekaterina, Marz, Manja, Reyes Muñoz, Alejandro, Hölzer, Martin, Finn, Robert D

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Four principles to establish a universal virus taxonomy von Simmonds, Peter, Adriaenssens, Evelien M, Zerbini, F Murilo, Abrescia, Nicola G A, Aiewsakun, Pakorn, Alfenas-Zerbini, Poliane, Bao, Yiming, Barylski, Jakub, Drosten, Christian, Duffy, Siobain, Duprex, W Paul, Dutilh, Bas E, Elena, Santiago F, García, Maria Laura, Junglen, Sandra, Katzourakis, Aris, Koonin, Eugene V, Krupovic, Mart, Kuhn, Jens H, Lambert, Amy J, Lefkowitz, Elliot J, Łobocka, Małgorzata, Lood, Cédric, Mahony, Jennifer, Meier-Kolthoff, Jan P, Mushegian, Arcady R, Oksanen, Hanna M, Poranen, Minna M, Reyes-Muñoz, Alejandro, Robertson, David L, Roux, Simon, Rubino, Luisa, Sabanadzovic, Sead, Siddell, Stuart, Skern, Tim, Smith, Donald B, Sullivan, Matthew B, Suzuki, Nobuhiro, Turner, Dann, Van Doorslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Vasilakis, Nikos

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Taking Microbiome Science to the Next Level: Recommendations to Advance the Emerging Field of Microbiome-Based Therapeutics and Diagnostics von Britton, Robert A., Verdu, Elena F., Di Rienzi, Sara C., Reyes Muñoz, Alejandro, Tarr, Phillip I., Preidis, Geoffrey A., Tomeo, Nicholas J., Ranallo, Ryan T., Pimentel, Mark, Chang, Eugene

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A whole genome duplication drives the genome evolution of Phytophthora betacei, a closely related species to Phytophthora infestans von Ayala-Usma, David A., Cardenas, Martha, Guyot, Romain, De Mares, Maryam Chaib, Bernal, Adriana, Munoz, Alejandro Reyes, Restrepo, Silvia

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Perspective on taxonomic classification of uncultivated viruses von Dutilh, Bas E, Varsani, Arvind, Tong, Yigang, Simmonds, Peter, Sabanadzovic, Sead, Rubino, Luisa, Roux, Simon, Muñoz, Alejandro Reyes, Lood, Cédric, Lefkowitz, Elliot J, Kuhn, Jens H, Krupovic, Mart, Edwards, Robert A, Brister, J Rodney, Adriaenssens, Evelien M, Sullivan, Matthew B

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Local confinement of disease-related microbiome facilitates recovery of gorgonian sea fans from necrotic-patch disease von Quintanilla, Elena, Ramírez-Portilla, Catalina, Adu-Oppong, Boahemaa, Walljasper, Gretchen, Glaeser, Stefanie P., Wilke, Thomas, Muñoz, Alejandro Reyes, Sánchez, Juan A.

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Comparative genomics identifies conserved and variable TAL effectors in African strains of the cotton pathogen Xanthomonas citri pv. malvacearum von Perez-Quintero, Alvaro L, Rodriguez-R, Luis M, Cuesta-Morrondo, Sara, Hakalová, Eliška, Betancurt-Anzola, Daniela, Camelo Valera, Laura Carolina, Chica Cardenas, Luis Alberto, Matiz-Ceron, Luisa, Jacobs, Jonathan, Roman-Reyna, Veronica, Reyes Muñoz, Alejandro, Bernal, Adriana J, Koebnik, Ralf

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Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2024) von Simmonds, Peter, Adriaenssens, Evelien M., Lefkowitz, Elliot J., Oksanen, Hanna M., Siddell, Stuart G., Zerbini, Francisco Murilo, Alfenas-Zerbini, Poliane, Aylward, Frank O., Dempsey, Donald M., Dutilh, Bas E., Freitas-Astúa, Juliana, García, María Laura, Hendrickson, R. Curtis, Hughes, Holly R., Junglen, Sandra, Krupovic, Mart, Kuhn, Jens H., Lambert, Amy J., Łobocka, Małgorzata, Mushegian, Arcady R., Penzes, Judit, Muñoz, Alejandro Reyes, Robertson, David L., Roux, Simon, Rubino, Luisa, Sabanadzovic, Sead, Smith, Donald B., Suzuki, Nobuhiro, Turner, Dann, Van Doorslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind

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Mining of Thousands of Prokaryotic Genomes Reveals High Abundance of Prophages with a Strictly Narrow Host Range von López-Leal, Gamaliel, Camelo-Valera, Laura Carolina, Hurtado-Ramírez, Juan Manuel, Verleyen, Jérôme, Castillo-Ramírez, Santiago, Reyes-Muñoz, Alejandro

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Non-Extensive Fragmentation of Natural Products and Pharmacophore-Based Virtual Screening as a Practical Approach to Identify Novel Promising Chemical Scaffolds von Felipe Vasquez, Andres, Reyes Munoz, Alejandro, Duitama, Jorge, Gonzalez Barrios, Andres

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Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee von Turner, Dann, Shkoporov, Andrey N., Lood, Cédric, Millard, Andrew D., Dutilh, Bas E., Alfenas-Zerbini, Poliane, van Zyl, Leonardo J., Aziz, Ramy K., Oksanen, Hanna M., Poranen, Minna M., Kropinski, Andrew M., Barylski, Jakub, Brister, J Rodney, Chanisvili, Nina, Edwards, Rob A., Enault, François, Gillis, Annika, Knezevic, Petar, Krupovic, Mart, Kurtböke, Ipek, Kushkina, Alla, Lavigne, Rob, Lehman, Susan, Lobocka, Malgorzata, Moraru, Cristina, Moreno Switt, Andrea, Morozova, Vera, Nakavuma, Jesca, Reyes Muñoz, Alejandro, Rūmnieks, Jānis, Sarkar, BL, Sullivan, Matthew B., Uchiyama, Jumpei, Wittmann, Johannes, Yigang, Tong, Adriaenssens, Evelien M.

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MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes von Coclet, Clément, Camargo, Antonio Pedro, Roux, Simon

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A novel vieuvirus from multidrug-resistant Acinetobacter baumannii von López-Leal, Gamaliel, Reyes-Muñoz, Alejandro, Santamaria, Rosa Isela, Cevallos, Miguel A., Pérez-Monter, Carlos, Castillo-Ramírez, Santiago

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Four principles to establish a universal virus taxonomy von Simmonds, Peter, Adriaenssens, Evelien M., Zerbini, F. Murilo, Abrescia, Nicola G. A., Aiewsakun, Pakorn, Alfenas-Zerbini, Poliane, Bao, Yiming, Barylski, Jakub, Drosten, Christian, Duffy, Siobain, Duprex, W. Paul, Dutilh, Bas E., Elena, Santiago F., García, Maria Laura, Junglen, Sandra, Katzourakis, Aris, Koonin, Eugene V., Krupovic, Mart, Kuhn, Jens H., Lambert, Amy J., Lefkowitz, Elliot J., Łobocka, Małgorzata, Lood, Cédric, Mahony, Jennifer, Meier-Kolthoff, Jan P., Mushegian, Arcady R., Oksanen, Hanna M., Poranen, Minna M., Reyes-Muñoz, Alejandro, Robertson, David L., Roux, Simon, Rubino, Luisa, Sabanadzovic, Sead, Siddell, Stuart, Skern, Tim, Smith, Donald B., Sullivan, Matthew B., Suzuki, Nobuhiro, Turner, Dann, Van Doorslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Vasilakis, Nikos

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Four principles to establish a universal virus taxonomy von Peter, Simmonds, Evelien, Adriaenssens, Murilo, Zerbini, Nicola, Abrescia, Pakorn, Aiewsakun, Poliane, Alfenas-Zerbini, Yiming, Bao, Jakub, Barylski, Christian, Drosten, Siobain, Duffy, Paul, Duprex, Santiago, Elena, Bas, Dutilh, Maria Laura, Garcia, Sandra, Junglen, Aris, Katzourakis, Eugene, Koonin, Mart, Krupovic, Jens, Kuhn, Amy, Lambert, Elliott, Lefkowitz, Malgorzata, Lobocka, Lood, Cédric, Jennifer, Mahony, Jan, Meier-Kolthoff, Arcady, Mushegian, Hanna, Oksanen, Minna, Poranen, Alejandro, Reyes-Munoz, David, Robertson, Simon, Roux, Luisa, Rubino, Sead, Sabanadzovic, Stuart, Siddell, Tim, Skern, Donald, Smith, Matthew, Sullivan, Nobuhiro, Suzuki, Dann, Turner, Koenraad, Van Doorslaer, Vandamme, Anne-Mieke, Arvind, Varsani, Nikos, Vasilakis

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Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee von Turner, Dann, Shkoporov, Andrey N, Lood, Cedric, Millard, Andrew D, Dutilh, Bas E, Alfenas-Zerbini, Poliane, van Zyl, Leonardo J, Aziz, Ramy K, Oksanen, Hanna M, Poranen, Minna M, Kropinski, Andrew M, Barylski, Jakub, Brister, J. Rodney, Chanisvili, Nina, Edwards, Rob A, Enault, Francois, Gillis, Annika, Knezevic, Petar, Krupovic, Mart, Kurtboke, Ipek, Kushkina, Alla, Lavigne, Rob, Lehman, Susan, Lobocka, Malgorzata, Moraru, Cristina, Moreno Switt, Andrea, Morozova, Vera, Nakavuma, Jesca, Reyes Munoz, Alejandro, Rumnieks, Janis, Sarkar, B.L, Sullivan, Matthew B, Uchiyama, Jumpei, Wittmann, Johannes, Yigang, Tong, Adriaenssens, Evelien M

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Perspective on taxonomic classification of uncultivated viruses von Dutilh, Bas E, Varsani, Arvind, Tong, Yigang, Simmonds, Peter, Sabanadzovic, Sead, Rubino, Luisa, Roux, Simon, Reyes Munoz, Alejandro, Lood, Cedric, Lefkowitz, Elliot J, Kuhn, Jens H, Krupovic, Mart, Edwards, Robert A, Brister, J. Rodney, Adriaenssens, Evelien M, Sullivan, Matthew B

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Global phylogeography and ancient evolution of the widespread human gut virus crAssphage von Edwards, Robert A., Vega, Alejandro A., Norman, Holly M., Cinek, Ondrej, Aziz, Ramy K., McNair, Katelyn, Barr, Jeremy J., Brouns, Stan J. J., Cazares, Adrian, de Jonge, Patrick A., Díaz Muñoz, Samuel L., Kurilshikov, Alexander, Lavigne, Rob, Mazankova, Karla, McCarthy, David T., Nobrega, Franklin L., Reyes Muñoz, Alejandro, Tapia, German, Trefault, Nicole, Tyakht, Alexander V., Vinuesa, Pablo, Wagemans, Jeroen, Aarestrup, Frank M., Ahmadov, Gunduz, Alassaf, Abeer, Anton, Josefa, Asangba, Abigail, Billings, Emma K., Cantu, Vito Adrian, Carlton, Jane M., Cazares, Daniel, Cho, Gyu-Sung, Condeff, Tess, Cortés, Pilar, Cranfield, Mike, Cuevas, Daniel A., De la Iglesia, Rodrigo, Decewicz, Przemyslaw, Doane, Michael P., Dominy, Nathaniel J., Dziewit, Lukasz, Elwasila, Bashir Mukhtar, Eren, A. Murat, Franz, Charles, Fu, Jingyuan, Garcia-Aljaro, Cristina, Ghedin, Elodie, Haggerty, John M., Head, Steven R., Hill, Colin, Hyöty, Heikki, Ilina, Elena N., Irwin, Mitchell T., Jeffries, Thomas C., Jofre, Juan, Junge, Randall E., Kelley, Scott T., Khan Mirzaei, Mohammadali, Kowalewski, Martin, Kumaresan, Deepak, Leigh, Steven R., Lisitsyna, Eugenia S., Llagostera, Montserrat, Maritz, Julia M., Marr, Linsey C., McCann, Angela, Molshanski-Mor, Shahar, Monteiro, Silvia, Moreira-Grez, Benjamin, Morris, Megan, Mugisha, Lawrence, Muniesa, Maite, Neve, Horst, Nguyen, Nam-phuong, Nigro, Olivia D., Nilsson, Anders S., O’Connell, Taylor, Oliver, Andrew, Piuri, Mariana, Qimron, Udi, Quan, Zhe-Xue, Rainetova, Petra, Raya, Raul, Rice, Gillian A. O., Rossi, Alessandro, Santos, Ricardo, Shimashita, John, Stachler, Elyse N., Stene, Lars C., Strain, Ronan, Torres, Pedro J., Twaddle, Alan, Ugochi Ibekwe, MaryAnn, Villagra, Nicolás, Wandro, Stephen, White, Bryan, Whiteley, Andy, Wijmenga, Cisca, Zschach, Henrike, Dutilh, Bas E.

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