A comprehensive panel of three-dimensional models for studies of prostate cancer growth, invasion and drug responses von Härmä, Ville, Virtanen, Johannes, Mäkelä, Rami, Happonen, Antti, Mpindi, John-Patrick, Knuuttila, Matias, Kohonen, Pekka, Lötjönen, Jyrki, Kallioniemi, Olli, Nees, Matthias

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High-throughput 3D screening reveals differences in drug sensitivities between culture models of JIMT1 breast cancer cells von Hongisto, Vesa, Jernström, Sandra, Fey, Vidal, Mpindi, John-Patrick, Kleivi Sahlberg, Kristine, Kallioniemi, Olli, Perälä, Merja

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Clinical relevance of integrin alpha 4 in gastrointestinal stromal tumours von Pulkka, Olli‐Pekka, Mpindi, John‐Patrick, Tynninen, Olli, Nilsson, Bengt, Kallioniemi, Olli, Sihto, Harri, Joensuu, Heikki

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High-throughput RNAi screening for novel modulators of vimentin expression identifies MTHFD2 as a regulator of breast cancer cell migration and invasion von Lehtinen, Laura, Ketola, Kirsi, Mäkelä, Rami, Mpindi, John-Patrick, Viitala, Miro, Kallioniemi, Olli, Iljin, Kristiina

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ITGB1-dependent upregulation of Caveolin-1 switches TGFβ signalling from tumour-suppressive to oncogenic in prostate cancer von Pellinen, Teijo, Blom, Sami, Sánchez, Sara, Välimäki, Katja, Mpindi, John-Patrick, Azegrouz, Hind, Strippoli, Raffaele, Nieto, Raquel, Vitón, Mariano, Palacios, Irene, Turkki, Riku, Wang, Yinhai, Sánchez-Alvarez, Miguel, Nordling, Stig, Bützow, Anna, Mirtti, Tuomas, Rannikko, Antti, Montoya, María C., Kallioniemi, Olli, del Pozo, Miguel A.

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Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues von Kilpinen, Sami, Autio, Reija, Ojala, Kalle, Iljin, Kristiina, Bucher, Elmar, Sara, Henri, Pisto, Tommi, Saarela, Matti, Skotheim, Rolf I, Björkman, Mari, Mpindi, John-Patrick, Haapa-Paananen, Saija, Vainio, Paula, Edgren, Henrik, Wolf, Maija, Astola, Jaakko, Nees, Matthias, Hautaniemi, Sampsa, Kallioniemi, Olli

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Anagrelide for Gastrointestinal Stromal Tumor von Pulkka, Olli-Pekka, Gebreyohannes, Yemarshet K, Wozniak, Agnieszka, Mpindi, John-Patrick, Tynninen, Olli, Icay, Katherine, Cervera, Alejandra, Keskitalo, Salla, Murumägi, Astrid, Kulesskiy, Evgeny, Laaksonen, Maria, Wennerberg, Krister, Varjosalo, Markku, Laakkonen, Pirjo, Lehtonen, Rainer, Hautaniemi, Sampsa, Kallioniemi, Olli, Schöffski, Patrick, Sihto, Harri, Joensuu, Heikki

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Arachidonic Acid Pathway Members PLA2G7 , HPGD , EPHX2 , and CYP4F8 Identified as Putative Novel Therapeutic Targets in Prostate Cancer von Vainio, Paula, Gupta, Santosh, Ketola, Kirsi, Mirtti, Tuomas, Mpindi, John-Patrick, Kohonen, Pekka, Fey, Vidal, Perälä, Merja, Smit, Frank, Verhaegh, Gerald, Schalken, Jack, Alanen, Kalle A, Kallioniemi, Olli, Iljin, Kristiina

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High-throughput transcriptomic and RNAi analysis identifies AIM1, ERGIC1, TMED3 and TPX2 as potential drug targets in prostate cancer von Vainio, Paula, Mpindi, John-Patrick, Kohonen, Pekka, Fey, Vidal, Mirtti, Tuomas, Alanen, Kalle A, Perälä, Merja, Kallioniemi, Olli, Iljin, Kristiina

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REG4 Is Highly Expressed in Mucinous Ovarian Cancer: A Potential Novel Serum Biomarker von Lehtinen, Laura, Vesterkvist, Pia, Roering, Pia, Korpela, Taina, Hattara, Liisa, Kaipio, Katja, Mpindi, John-Patrick, Hynninen, Johanna, Auranen, Annika, Davidson, Ben, Haglund, Caj, Iljin, Kristiina, Grenman, Seija, Siitari, Harri, Carpen, Olli

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A cell spot microarray method for production of high density siRNA transfection microarrays von Rantala, Juha K, Mäkelä, Rami, Aaltola, Anna-Riina, Laasola, Petra, Mpindi, John-Patrick, Nees, Matthias, Saviranta, Petri, Kallioniemi, Olli

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High miR-30 Expression Associates with Improved Breast Cancer Patient Survival and Treatment Outcome von Jamshidi, Maral, Fagerholm, Rainer, Muranen, Taru A., Kaur, Sippy, Potdar, Swapnil, Khan, Sofia, Netti, Eliisa, Mpindi, John-Patrick, Yadav, Bhagwan, Kiiski, Johanna I., Aittomäki, Kristiina, Heikkilä, Päivi, Saarela, Jani, Bützow, Ralf, Blomqvist, Carl, Nevanlinna, Heli

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Plasticity of blood- and lymphatic endothelial cells and marker identification von Keuschnigg, Johannes, Karinen, Sirkku, Auvinen, Kaisa, Irjala, Heikki, Mpindi, John-Patrick, Kallioniemi, Olli, Hautaniemi, Sampsa, Jalkanen, Sirpa, Salmi, Marko

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Systematic drug screening reveals specific vulnerabilities and co-resistance patterns in endocrine-resistant breast cancer von Kangaspeska, Sara, Hultsch, Susanne, Jaiswal, Alok, Edgren, Henrik, Mpindi, John-Patrick, Eldfors, Samuli, Brück, Oscar, Aittokallio, Tero, Kallioniemi, Olli

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Breeze: an integrated quality control and data analysis application for high-throughput drug screening von Potdar, Swapnil, Ianevski, Aleksandr, Mpindi, John-Patrick, Bychkov, Dmitrii, Fiere, Clément, Ianevski, Philipp, Yadav, Bhagwan, Wennerberg, Krister, Aittokallio, Tero, Kallioniemi, Olli, Saarela, Jani, Östling, Päivi

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Integrative genomic, transcriptomic, and RNAi analysis indicates a potential oncogenic role for FAM110B in castration-resistant prostate cancer von Vainio, Paula, Wolf, Maija, Edgren, Henrik, He, Tao, Kohonen, Pekka, Mpindi, John-Patrick, Smit, Frank, Verhaegh, Gerald, Schalken, Jack, Perälä, Merja, Iljin, Kristiina, Kallioniemi, Olli

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A community effort to assess and improve drug sensitivity prediction algorithms von Costello, James C, Heiser, Laura M, Georgii, Elisabeth, Gönen, Mehmet, Menden, Michael P, Wang, Nicholas J, Bansal, Mukesh, Ammad-ud-din, Muhammad, Hintsanen, Petteri, Khan, Suleiman A, Mpindi, John-Patrick, Kallioniemi, Olli, Honkela, Antti, Aittokallio, Tero, Wennerberg, Krister, Collins, James J, Gallahan, Dan, Singer, Dinah, Saez-Rodriguez, Julio, Kaski, Samuel, Gray, Joe W, Stolovitzky, Gustavo

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Androgen receptor‐interacting protein HSPBAP1 facilitates growth of prostate cancer cells in androgen‐deficient conditions von Saeed, Khalid, Östling, Päivi, Björkman, Mari, Mirtti, Tuomas, Alanen, Kalle, Vesterinen, Tiina, Sankila, Anna, Lundin, Johan, Lundin, Mikael, Rannikko, Antti, Nordling, Stig, Mpindi, John‐Patrick, Kohonen, Pekka, Iljin, Kristiina, Kallioniemi, Olli, Rantala, Juha K.

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A community computational challenge to predict the activity of pairs of compounds von Bansal, Mukesh, Yang, Jichen, Karan, Charles, Menden, Michael P, Costello, James C, Tang, Hao, Xiao, Guanghua, Li, Yajuan, Allen, Jeffrey, Zhong, Rui, Chen, Beibei, Kim, Minsoo, Wang, Tao, Heiser, Laura M, Realubit, Ronald, Mattioli, Michela, Alvarez, Mariano J, Shen, Yao, Gallahan, Daniel, Singer, Dinah, Saez-Rodriguez, Julio, Xie, Yang, Stolovitzky, Gustavo, Califano, Andrea

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FZD4 as a Mediator of ERG Oncogene―Induced WNT Signaling and Epithelial-to-Mesenchymal Transition in Human Prostate Cancer Cells von GUPTA, Santosh, ILJIN, Kristiina, SARA, Henri, MPINDI, John Patrick, MIRTTI, Tuomas, VAINIO, Paula, RANTALA, Juha, ALANEN, Kalle, NEES, Matthias, KALLIONIEMI, Olli

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