Upper tract urothelial carcinoma has a luminal-papillary T-cell depleted contexture and activated FGFR3 signaling von Robinson, Brian D., Vlachostergios, Panagiotis J., Bhinder, Bhavneet, Liu, Weisi, Li, Kailyn, Moss, Tyler J., Bareja, Rohan, Park, Kyung, Tavassoli, Peyman, Cyrta, Joanna, Tagawa, Scott T., Nanus, David M., Beltran, Himisha, Molina, Ana M., Khani, Francesca, Miguel Mosquera, Juan, Xylinas, Evanguelos, Shariat, Shahrokh F., Scherr, Douglas S., Rubin, Mark A., Lerner, Seth P., Matin, Surena F., Elemento, Olivier, Faltas, Bishoy M.

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A Deep Learning Framework for Predicting Response to Therapy in Cancer von Sakellaropoulos, Theodore, Vougas, Konstantinos, Narang, Sonali, Koinis, Filippos, Kotsinas, Athanassios, Polyzos, Alexander, Moss, Tyler J., Piha-Paul, Sarina, Zhou, Hua, Kardala, Eleni, Damianidou, Eleni, Alexopoulos, Leonidas G., Aifantis, Iannis, Townsend, Paul A., Panayiotidis, Mihalis I., Sfikakis, Petros, Bartek, Jiri, Fitzgerald, Rebecca C., Thanos, Dimitris, Mills Shaw, Kenna R., Petty, Russell, Tsirigos, Aristotelis, Gorgoulis, Vassilis G.

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Comprehensive Genomic Characterization of Upper Tract Urothelial Carcinoma von Moss, Tyler J, Qi, Yuan, Xi, Liu, Peng, Bo, Kim, Tae-Beom, Ezzedine, Nader E, Mosqueda, Maribel E, Guo, Charles C, Czerniak, Bogdan A, Ittmann, Michael, Wheeler, David A, Lerner, Seth P, Matin, Surena F

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Homotypic fusion of ER membranes requires the dynamin-like GTPase Atlastin von Orso, Genny, Pendin, Diana, Liu, Song, Tosetto, Jessica, Moss, Tyler J., Faust, Joseph E., Micaroni, Massimo, Egorova, Anastasia, Martinuzzi, Andrea, McNew, James A., Daga, Andrea

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A switch in the source of ATP production and a loss in capacity to perform glycolysis are hallmarks of hepatocyte failure in advance liver disease von Nishikawa, Taichiro, Bellance, Nadège, Damm, Aaron, Bing, Han, Zhu, Zhen, Handa, Kan, Yovchev, Mladen I, Sehgal, Vasudha, Moss, Tyler J, Oertel, Michael, Ram, Prahlad T, Pipinos, Iraklis I, Soto-Gutierrez, Alejandro, Fox, Ira J, Nagrath, Deepak

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The glucose‐deprivation network counteracts lapatinib‐induced toxicity in resistant ErbB2‐positive breast cancer cells von Komurov, Kakajan, Tseng, Jen‐Te, Muller, Melissa, Seviour, Elena G, Moss, Tyler J, Yang, Lifeng, Nagrath, Deepak, Ram, Prahlad T

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Membrane fusion by the GTPase atlastin requires a conserved C-terminal cytoplasmic tail and dimerization through the middle domain von Moss, Tyler J, Andreazza, Camilla, Verma, Avani, Daga, Andrea, McNew, James A

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The ZNF304-integrin axis protects against anoikis in cancer von Aslan, Burcu, Monroig, Paloma, Hsu, Ming-Chuan, Pena, Guillermo Armaiz, Rodriguez-Aguayo, Cristian, Gonzalez-Villasana, Vianey, Rupaimoole, Rajesha, Nagaraja, Archana Sidalaghatta, Mangala, Selanere, Han, Hee-Dong, Yuca, Erkan, Wu, Sherry Y., Ivan, Cristina, Moss, Tyler J., Ram, Prahlad T., Wang, Huamin, Gol-Chambers, Alexandra, Ozkayar, Ozgur, Kanlikilicer, Pinar, Fuentes-Mattei, Enrique, Kahraman, Nermin, Pradeep, Sunila, Ozpolat, Bulent, Tucker, Susan, Hung, Mien-Chie, Baggerly, Keith, Bartholomeusz, Geoffrey, Calin, George, Sood, Anil K., Lopez-Berestein, Gabriel

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Robust Selection Algorithm (RSA) for Multi-Omic Biomarker Discovery; Integration with Functional Network Analysis to Identify miRNA Regulated Pathways in Multiple Cancers von Sehgal, Vasudha, Seviour, Elena G, Moss, Tyler J, Mills, Gordon B, Azencott, Robert, Ram, Prahlad T

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GTP-dependent packing of a three-helix bundle is required for atlastin-mediated fusion von Pendin, Diana, Tosetto, Jessica, Moss, Tyler J, Andreazza, Camilla, Moro, Stefano, McNew, James A, Daga, Andrea

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Whole-exome sequencing for ocular adnexal sebaceous carcinoma suggests PCDH15 as a novel mutation associated with metastasis von Xu, Shiqiong, Moss, Tyler J., Laura Rubin, Maria, Ning, Jing, Eterovic, Karina, Yu, Hong, Jia, Renbing, Fan, Xianqun, Tetzlaff, Michael T., Esmaeli, Bita

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The Atlastin C-terminal Tail Is an Amphipathic Helix That Perturbs the Bilayer Structure during Endoplasmic Reticulum Homotypic Fusion von Faust, Joseph E., Desai, Tanvi, Verma, Avani, Ulengin, Idil, Sun, Tzu-Lin, Moss, Tyler J., Betancourt-Solis, Miguel A., Huang, Huey W., Lee, Tina, McNew, James A.

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Extend the benchmarking indel set by manual review using the individual cell line sequencing data from the Sequencing Quality Control 2 (SEQC2) project von Gong, Binsheng, Li, Dan, Zhang, Yifan, Kusko, Rebecca, Lababidi, Samir, Cao, Zehui, Chen, Mingyang, Chen, Ning, Chen, Qiaochu, Chen, Qingwang, Dai, Jiacheng, Gan, Qiang, Gao, Yuechen, Guo, Mingkun, Hariani, Gunjan, He, Yujie, Hou, Wanwan, Jiang, He, Kushwaha, Garima, Li, Jian-Liang, Li, Jianying, Li, Yulan, Liu, Liang-Chun, Liu, Ruimei, Liu, Shiming, Meriaux, Edwin, Mo, Mengqing, Moore, Mathew, Moss, Tyler J., Niu, Quanne, Patel, Ananddeep, Ren, Luyao, Saremi, Nedda F., Shang, Erfei, Shang, Jun, Song, Ping, Sun, Siqi, Urban, Brent J., Wang, Danke, Wang, Shangzi, Wen, Zhining, Xiong, Xiangyi, Yang, Jingcheng, Yin, Lihui, Zhang, Chao, Zhang, Ruolan, Bhandari, Ambica, Cai, Wanshi, Eterovic, Agda Karina, Megherbi, Dalila B., Shi, Tieliu, Suo, Chen, Yu, Ying, Zheng, Yuanting, Novoradovskaya, Natalia, Sears, Renee L., Shi, Leming, Jones, Wendell, Tong, Weida, Xu, Joshua

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RAC1 Alterations Induce Acquired Dabrafenib Resistance in Association with Anaplastic Transformation in a Papillary Thyroid Cancer Patient von Bagheri-Yarmand, Rozita, Busaidy, Naifa L, McBeath, Elena, Danysh, Brian P, Evans, Kurt W, Moss, Tyler J, Akcakanat, Argun, Ng, Patrick K S, Knippler, Christina M, Golden, Jalyn A, Williams, Michelle D, Multani, Asha S, Cabanillas, Maria E, Shaw, Kenna R, Meric-Bernstam, Funda, Shah, Manisha H, Ringel, Matthew D, Hofmann, Marie Claude

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Fusing a lasting relationship between ER tubules von Moss, Tyler J, Daga, Andrea, McNew, James A

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Genome-wide perturbations by miRNAs map onto functional cellular pathways, identifying regulators of chromatin modifiers von Moss, Tyler J, Luo, Zijun, Seviour, Elena G, Sehgal, Vasudha, Lu, Yiling, Hill, Steven M, Rupaimoole, Rajesha, Lee, Ju-Seog, Rodriguez-Aguayo, Cristian, Lopez-Berestein, Gabriel, Sood, Anil K, Azencott, Robert, Gray, Joe W, Mukherjee, Sach, Mills, Gordon B, Ram, Prahlad T

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Baseline cfDNA characteristics and evolution of cfDNA profile during treatment with selective FGFR inhibitor TAS-120 von Moss, Tyler J., Rodon Ahnert, Jordi, Oakley, Holly D., Kahle, Michael, Karp, Daniel D., Pant, Shubham, Jacob, Jeena, Raymond, Victoria M., Lanman, Richard B., Kwong, Lawrence, Routbort, Mark, Soni, Nital, Huang, Jerry, Javle, Milind M., Meric-Bernstam, Funda

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Comprehensive genomic characterization of upper tract urothelial carcinoma (UTUC) von Moss, Tyler J., Qi, Yuan, Xi, Liu, Peng, Bo, Mosqueda, Maribel E, Guo, Charles, Ittman, Michael, Wheeler, David A., Lerner, Seth P., Matin, Surena F.

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A data mining framework for predicting drug response in cancer von Vougas, Konstantinos, Sakelaropoulos, Theodore, Koinis, Filippos, Polyzos, Alexander, Kotsinas, Athanassios, Myrianthopoulos, Vassilis, Moss, Tyler J, Piha-Paul, Sarina, Zhou, Hua, Narang, Sonali, Foukas, George-Romanos P, Ntargaras, Andreas, Georgoulias, Vassilis, Alexopoulos, Leonidas, Aifantis, Iannis, Townsend, Paul, Sfikakis, Petros, Fitzgerald, Rebecca, Thanos, Dimitris, Mills Shaw, Kenna R, Bartek, Jiri, Petty, Russell, Tsirigos, Aristotelis, Gorgoulis, Vasileios

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Whole exome sequencing of metaplastic breast cancer (MpBC): Effect of mutation status on survival von Baez Vallecillo, Luis, Chang, Jeffrey T, Chen, Ken, Moss, Tyler J., Shaw, Kenna Rael, Meric-Bernstam, Funda, Eterovic, Agda Karina, Mills, Gordon B., Mani, Sendurai, Li, Xiaoxian (Bill), Gilcrease, Michael, Moulder, Stacy L.

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