Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants von Diaz, Maureen H, Desai, Heta P, Morrison, Shatavia S, Benitez, Alvaro J, Wolff, Bernard J, Caravas, Jason, Read, Timothy D, Dean, Deborah, Winchell, Jonas M

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Transcriptome sequencing reveals the virulence and environmental genetic programs of Vibrio vulnificus exposed to host and estuarine conditions von Williams, Tiffany C, Blackman, Elliot R, Morrison, Shatavia S, Gibas, Cynthia J, Oliver, James D

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Legionnaires' Disease Outbreak Caused by Endemic Strain of Legionella pneumophila, New York, New York, USA, 2015 von Lapierre, Pascal, Nazarian, Elizabeth, Zhu, Yan, Wroblewski, Danielle, Saylors, Amy, Passaretti, Teresa, Hughes, Scott, Tran, Anthony, Lin, Ying, Kornblum, John, Morrison, Shatavia S, Mercante, Jeffrey W, Fitzhenry, Robert, Weiss, Don, Raphael, Brian H, Varma, Jay K, Zucker, Howard A, Rakeman, Jennifer L, Musser, Kimberlee A

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Genomic Analysis Reveals Novel Diversity among the 1976 Philadelphia Legionnaires' Disease Outbreak Isolates and Additional ST36 Strains von Mercante, Jeffrey W, Morrison, Shatavia S, Desai, Heta P, Raphael, Brian H, Winchell, Jonas M

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Pyrosequencing-based comparative genome analysis of Vibrio vulnificus environmental isolates von Morrison, Shatavia S, Williams, Tiffany, Cain, Aurora, Froelich, Brett, Taylor, Casey, Baker-Austin, Craig, Verner-Jeffreys, David, Hartnell, Rachel, Oliver, James D, Gibas, Cynthia J

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Genomic Resolution of Outbreak-Associated Legionella pneumophila Serogroup 1 Isolates from New York State von Raphael, Brian H, Baker, Deborah J, Nazarian, Elizabeth, Lapierre, Pascal, Bopp, Dianna, Kozak-Muiznieks, Natalia A, Morrison, Shatavia S, Lucas, Claressa E, Mercante, Jeffrey W, Musser, Kimberlee A, Winchell, Jonas M

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Phylogeny of Vibrio vulnificus from the Analysis of the Core-Genome: Implications for Intra-Species Taxonomy von Roig, Francisco J, González-Candelas, Fernando, Sanjuán, Eva, Fouz, Belén, Feil, Edward J, Llorens, Carlos, Baker-Austin, Craig, Oliver, James D, Danin-Poleg, Yael, Gibas, Cynthia J, Kashi, Yechezkel, Gulig, Paul A, Morrison, Shatavia S, Amaro, Carmen

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Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies von Kozak-Muiznieks, Natalia A., Morrison, Shatavia S., Mercante, Jeffrey W., Ishaq, Maliha K., Johnson, Taccara, Caravas, Jason, Lucas, Claressa E., Brown, Ellen, Raphael, Brian H., Winchell, Jonas M.

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Dynamics of genome change among Legionella species von Joseph, Sandeep J., Cox, Daniel, Wolff, Bernard, Morrison, Shatavia S., Kozak-Muiznieks, Natalia A., Frace, Michael, Didelot, Xavier, Castillo-Ramirez, Santiago, Winchell, Jonas, Read, Timothy D., Dean, Deborah

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Correction: Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants von Diaz, Maureen H, Desai, Heta P, Morrison, Shatavia S, Benitez, Alvaro J, Wolff, Bernard J, Caravas, Jason, Read, Timothy D, Dean, Deborah, Winchell, Jonas M

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Corrigendum: Phylogeny of Vibrio vulnificus From the Analysis of the Core-Genome: Implications for Intra-Species Taxonomy von Roig, Francisco J, González-Candelas, Fernando, Sanjuán, Eva, Fouz, Belén, Feil, Edward J, Llorens, Carlos, Baker-Austin, Craig, Oliver, James D, Danin-Poleg, Yael, Gibas, Cynthia J, Kashi, Yechezkel, Gulig, Paul A, Morrison, Shatavia S, Amaro, Carmen

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Development of a multiplex TaqMan real-time PCR assay for the detection of Chlamydia psittaci and Chlamydia pneumoniae in human clinical specimens von Wolff, Bernard J., Morrison, Shatavia S., Winchell, Jonas M.

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Chlamydia psittaci comparative genomics reveals intraspecies variations in the putative outer membrane and type III secretion system genes von Wolff, Bernard J, Morrison, Shatavia S, Pesti, Denise, Ganakammal, Satishkumar Ranganathan, Srinivasamoorthy, Ganesh, Changayil, Shankar, Weil, M Ryan, MacCannell, Duncan, Rowe, Lori, Frace, Michael, Ritchie, Branson W, Dean, Deborah, Winchell, Jonas M

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Mycoplasma hominis Infections Transmitted Through Amniotic Tissue Product von Novosad, Shannon A., Basavaraju, Sridhar V., Annambhotla, Pallavi, Mohr, Marika, Halpin, Alison Laufer, Foy, Linda, Chmielewski, Richard, Winchell, Jonas M., Benitez, Alvaro J., Morrison, Shatavia S., Johnson, Taccara, Crabb, Donna M., Ratliff, Amy E., Waites, Ken, Kuehnert, Mattew J.

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Development of a multiplex taqMan real-time PCR assay for typing of Mycoplasma pneumoniae based on type-specific indels identified through whole genome sequencing von Wolff, Bernard J, Benitez, Alvaro J, Desai, Heta P, Morrison, Shatavia S, Diaz, Maureen H, Winchell, Jonas M

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Genomic analysis of Chlamydia psittaci from a multistate zoonotic outbreak in two chicken processing plants von Wolff, Bernard J., Waller, Jessica L., Benitez, Alvaro J., Gaines, Anna, Conley, Andrew B., Rishishwar, Lavanya, Chande, Aroon T., Morrison, Shatavia S., Jordan, I. King, Diaz, Maureen H., Winchell, Jonas M.

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Impact of analytic provenance in genome analysis von Morrison, Shatavia S, Pyzh, Roman, Jeon, Myung S, Amaro, Carmen, Roig, Francisco J, Baker-Austin, Craig, Oliver, James D, Gibas, Cynthia J

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Complete Genome Sequences of the Historical Legionella pneumophila Strains OLDA and Pontiac von Mercante, Jeffrey W, Morrison, Shatavia S, Raphael, Brian H, Winchell, Jonas M

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Mashtree: a rapid comparison of whole genome sequence files von Katz, Lee, Griswold, Taylor, Morrison, Shatavia, Caravas, Jason, Zhang, Shaokang, Bakker, Henk, Deng, Xiangyu, Carleton, Heather

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Characterization of Legionella Species from Watersheds in British Columbia, Canada von Peabody, Michael A, Caravas, Jason A, Morrison, Shatavia S, Mercante, Jeffrey W, Prystajecky, Natalie A, Raphael, Brian H, Brinkman, Fiona S L

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