Wild Mouse Gut Microbiota Promotes Host Fitness and Improves Disease Resistance von Rosshart, Stephan P., Vassallo, Brian G., Angeletti, Davide, Hutchinson, Diane S., Morgan, Andrew P., Takeda, Kazuyo, Hickman, Heather D., McCulloch, John A., Badger, Jonathan H., Ajami, Nadim J., Trinchieri, Giorgio, Pardo-Manuel de Villena, Fernando, Yewdell, Jonathan W., Rehermann, Barbara

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Genomes of the Mouse Collaborative Cross von Srivastava, Anuj, Morgan, Andrew P, Najarian, Maya L, Sarsani, Vishal Kumar, Sigmon, J Sebastian, Shorter, John R, Kashfeen, Anwica, McMullan, Rachel C, Williams, Lucy H, Giusti-Rodríguez, Paola, Ferris, Martin T, Sullivan, Patrick, Hock, Pablo, Miller, Darla R, Bell, Timothy A, McMillan, Leonard, Churchill, Gary A, de Villena, Fernando Pardo-Manuel

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The antipsychotic olanzapine interacts with the gut microbiome to cause weight gain in mouse von Morgan, Andrew P, Crowley, James J, Nonneman, Randal J, Quackenbush, Corey R, Miller, Cheryl N, Ryan, Allison K, Bogue, Molly A, Paredes, Sur Herrera, Yourstone, Scott, Carroll, Ian M, Kawula, Thomas H, Bower, Maureen A, Sartor, R Balfour, Sullivan, Patrick F

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argyle: An R Package for Analysis of Illumina Genotyping Arrays von Morgan, Andrew P

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Structural Variation Shapes the Landscape of Recombination in Mouse von Morgan, Andrew P, Gatti, Daniel M, Najarian, Maya L, Keane, Thomas M, Galante, Raymond J, Pack, Allan I, Mott, Richard, Churchill, Gary A, de Villena, Fernando Pardo-Manuel

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The epidemiology of Plasmodium vivax among adults in the Democratic Republic of the Congo von Brazeau, Nicholas F., Mitchell, Cedar L., Morgan, Andrew P., Deutsch-Feldman, Molly, Watson, Oliver John, Thwai, Kyaw L., Gelabert, Pere, van Dorp, Lucy, Keeler, Corinna Y., Waltmann, Andreea, Emch, Michael, Gartner, Valerie, Redelings, Ben, Wray, Gregory A., Mwandagalirwa, Melchior K., Tshefu, Antoinette K., Likwela, Joris L., Edwards, Jessie K., Verity, Robert, Parr, Jonathan B., Meshnick, Steven R., Juliano, Jonathan J.

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High-resolution sex-specific linkage maps of the mouse reveal polarized distribution of crossovers in male germline von Liu, Eric Yi, Morgan, Andrew P, Chesler, Elissa J, Wang, Wei, Churchill, Gary A, Pardo-Manuel de Villena, Fernando

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Falciparum malaria from coastal Tanzania and Zanzibar remains highly connected despite effective control efforts on the archipelago von Morgan, Andrew P., Brazeau, Nicholas F., Ngasala, Billy, Mhamilawa, Lwidiko E., Denton, Madeline, Msellem, Mwinyi, Morris, Ulrika, Filer, Dayne L., Aydemir, Ozkan, Bailey, Jeffrey A., Parr, Jonathan B., Martensson, Andreas, Bjorkman, Anders, Juliano, Jonathan J.

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The Collaborative Cross as a Resource for Modeling Human Disease: CC011/Unc, a New Mouse Model for Spontaneous Colitis von Rogala, Allison R., Morgan, Andrew P., Christensen, Alexis M., Gooch, Terry J., Bell, Timothy A., Miller, Darla R., Godfrey, Virginia L., de Villena, Fernando Pardo-Manuel

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Allelic Variation in the Toll-Like Receptor Adaptor Protein Ticam2 Contributes to SARS-Coronavirus Pathogenesis in Mice von Gralinski, Lisa E, Menachery, Vineet D, Morgan, Andrew P, Totura, Allison L, Beall, Anne, Kocher, Jacob, Plante, Jessica, Harrison-Shostak, D Corinne, Schäfer, Alexandra, Pardo-Manuel de Villena, Fernando, Ferris, Martin T, Baric, Ralph S

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Genetic architecture of atherosclerosis dissected by QTL analyses in three F2 intercrosses of apolipoprotein E-null mice on C57BL6/J, DBA/2J and 129S6/SvEvTac backgrounds von Makhanova, Natalia, Morgan, Andrew P, Kayashima, Yukako, Makhanov, Andrei, Hiller, Sylvia, Zhilicheva, Svetlana, Xu, Longquan, Pardo-Manuel de Villena, Fernando, Maeda, Nobuyo

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Diversity Outbred Mice at 21: Maintaining Allelic Variation in the Face of Selection von Chesler, Elissa J, Gatti, Daniel M, Morgan, Andrew P, Strobel, Marge, Trepanier, Laura, Oberbeck, Denesa, McWeeney, Shannon, Hitzemann, Robert, Ferris, Martin, McMullan, Rachel, Clayshultle, Amelia, Bell, Timothy A, Manuel de Villena, Fernando Pardo, Churchill, Gary A

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Whole Genome Sequence of Two Wild-Derived Mus musculus domesticus Inbred Strains, LEWES/EiJ and ZALENDE/EiJ, with Different Diploid Numbers von Morgan, Andrew P, Didion, John P, Doran, Anthony G, Holt, James M, McMillan, Leonard, Keane, Thomas M, de Villena, Fernando Pardo-Manuel

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Sequence and Structural Diversity of Mouse Y Chromosomes von Morgan, Andrew P, Pardo-Manuel de Villena, Fernando

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Informatics resources for the Collaborative Cross and related mouse populations von Morgan, Andrew P., Welsh, Catherine E.

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Population structure and inbreeding in wild house mice (Mus musculus) at different geographic scales von Morgan, Andrew P, Hughes, Jonathan J, Didion, John P, Jolley, Wesley J, Campbell, Karl J, Threadgill, David W, Bonhomme, Francois, Searle, Jeremy B, de Villena, Fernando Pardo-Manuel

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The impact of antimalarial resistance on the genetic structure of Plasmodium falciparum in the DRC von Verity, Robert, Aydemir, Ozkan, Brazeau, Nicholas F., Watson, Oliver J., Hathaway, Nicholas J., Mwandagalirwa, Melchior Kashamuka, Marsh, Patrick W., Thwai, Kyaw, Fulton, Travis, Denton, Madeline, Morgan, Andrew P., Parr, Jonathan B., Tumwebaze, Patrick K., Conrad, Melissa, Rosenthal, Philip J., Ishengoma, Deus S., Ngondi, Jeremiah, Gutman, Julie, Mulenga, Modest, Norris, Douglas E., Moss, William J., Mensah, Benedicta A., Myers-Hansen, James L., Ghansah, Anita, Tshefu, Antoinette K., Ghani, Azra C., Meshnick, Steven R., Bailey, Jeffrey A., Juliano, Jonathan J.

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Male Infertility Is Responsible for Nearly Half of the Extinction Observed in the Mouse Collaborative Cross von Shorter, John R, Odet, Fanny, Aylor, David L, Pan, Wenqi, Kao, Chia-Yu, Fu, Chen-Ping, Morgan, Andrew P, Greenstein, Seth, Bell, Timothy A, Stevans, Alicia M, Feathers, Ryan W, Patel, Sunny, Cates, Sarah E, Shaw, Ginger D, Miller, Darla R, Chesler, Elissa J, McMillian, Leonard, O'Brien, Deborah A, Villena, Fernando Pardo-Manuel de

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The Mouse Universal Genotyping Array: From Substrains to Subspecies von Morgan, Andrew P, Fu, Chen-Ping, Kao, Chia-Yu, Welsh, Catherine E, Didion, John P, Yadgary, Liran, Hyacinth, Leeanna, Ferris, Martin T, Bell, Timothy A, Miller, Darla R, Giusti-Rodriguez, Paola, Nonneman, Randal J, Cook, Kevin D, Whitmire, Jason K, Gralinski, Lisa E, Keller, Mark, Attie, Alan D, Churchill, Gary A, Petkov, Petko, Sullivan, Patrick F, Brennan, Jennifer R, McMillan, Leonard, Pardo-Manuel de Villena, Fernando

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Instability of the Pseudoautosomal Boundary in House Mice von Morgan, Andrew P, Bell, Timothy A, Crowley, James J, Pardo-Manuel de Villena, Fernando

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