Analytical evaluation of the clonoSEQ Assay for establishing measurable (minimal) residual disease in acute lymphoblastic leukemia, chronic lymphocytic leukemia, and multiple myelo... von Ching, Travers, Duncan, Megan E., Newman-Eerkes, Tera, McWhorter, Mollie M. E., Tracy, Jeffrey M., Steen, Michelle S., Brown, Ryan P., Venkatasubbarao, Srivatsa, Akers, Nicholas K., Vignali, Marissa, Moorhead, Martin E., Watson, Drew, Emerson, Ryan O., Mann, Tobias P., Cimler, B. Melina, Swatkowski, Pamela L., Kirsch, Ilan R., Sang, Charles, Robins, Harlan S., Howie, Bryan, Sherwood, Anna

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Multiplex Identification of Antigen-Specific T Cell Receptors Using a Combination of Immune Assays and Immune Receptor Sequencing von Klinger, Mark, Pepin, Francois, Wilkins, Jen, Asbury, Thomas, Wittkop, Tobias, Zheng, Jianbiao, Moorhead, Martin, Faham, Malek

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Deep-sequencing approach for minimal residual disease detection in acute lymphoblastic leukemia von Faham, Malek, Zheng, Jianbiao, Moorhead, Martin, Carlton, Victoria E.H., Stow, Patricia, Coustan-Smith, Elaine, Pui, Ching-Hon, Campana, Dario

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Circulating tumour DNA and CT monitoring in patients with untreated diffuse large B-cell lymphoma: a correlative biomarker study von Roschewski, Mark, MD, Dunleavy, Kieron, MD, Pittaluga, Stefania, MD-PhD, Moorhead, Martin, PhD, Pepin, Francois, PhD, Kong, Katherine, MS, Shovlin, Margaret, RN, Jaffe, Elaine S, MD, Staudt, Louis M, MD-PhD, Lai, Catherine, MD, Steinberg, Seth M, PhD, Chen, Clara C, MD, Zheng, Jianbiao, PhD, Willis, Thomas D, PhD, Faham, Malek, MD-PhD, Wilson, Wyndham H, Dr

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Prognostic value of deep sequencing method for minimal residual disease detection in multiple myeloma von Martinez-Lopez, Joaquin, Lahuerta, Juan J., Pepin, François, González, Marcos, Barrio, Santiago, Ayala, Rosa, Puig, Noemí, Montalban, María A., Paiva, Bruno, Weng, Li, Jiménez, Cristina, Sopena, María, Moorhead, Martin, Cedena, Teresa, Rapado, Immaculada, Mateos, María Victoria, Rosiñol, Laura, Oriol, Albert, Blanchard, María J., Martínez, Rafael, Bladé, Joan, San Miguel, Jesús, Faham, Malek, García-Sanz, Ramón

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Population structure, differential bias and genomic control in a large-scale, case-control association study von Clayton, David G, Todd, John A, Walker, Neil M, Smyth, Deborah J, Pask, Rebecca, Cooper, Jason D, Maier, Lisa M, Smink, Luc J, Lam, Alex C, Ovington, Nigel R, Stevens, Helen E, Nutland, Sarah, Howson, Joanna M M, Faham, Malek, Moorhead, Martin, Jones, Hywel B, Falkowski, Matthew, Hardenbol, Paul, Willis, Thomas D

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Combining next-generation sequencing and immune assays: a novel method for identification of antigen-specific T cells von Klinger, Mark, Kong, Katherine, Moorhead, Martin, Weng, Li, Zheng, Jianbiao, Faham, Malek

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Prediction of epigenetically regulated genes in breast cancer cell lines von Loss, Leandro A, Sadanandam, Anguraj, Durinck, Steffen, Nautiyal, Shivani, Flaucher, Diane, Carlton, Victoria E H, Moorhead, Martin, Lu, Yontao, Gray, Joe W, Faham, Malek, Spellman, Paul, Parvin, Bahram

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High-throughput method for analyzing methylation of CpGs in targeted genomic regions von Nautiyal, Shivani, Carlton, Victoria E. H., Lu, Yontao, Ireland, James S., Flaucher, Diane, Moorhead, Martin, Gray, Joe W., Spellman, Paul, Mindrinos, Michael, Berg, Paul, Faham, Malek, Ecker, Joseph R.

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High quality copy number and genotype data from FFPE samples using Molecular Inversion Probe (MIP) microarrays von Wang, Yuker, Carlton, Victoria E H, Karlin-Neumann, George, Sapolsky, Ronald, Zhang, Li, Moorhead, Martin, Wang, Zhigang C, Richardson, Andrea L, Warren, Robert, Walther, Axel, Bondy, Melissa, Sahin, Aysegul, Krahe, Ralf, Tuna, Musaffe, Thompson, Patricia A, Spellman, Paul T, Gray, Joe W, Mills, Gordon B, Faham, Malek

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Antigen presentation profiling reveals recognition of lymphoma immunoglobulin neoantigens von Khodadoust, Michael S., Olsson, Niclas, Wagar, Lisa E., Haabeth, Ole A. W., Chen, Binbin, Swaminathan, Kavya, Rawson, Keith, Liu, Chih Long, Steiner, David, Lund, Peder, Rao, Samhita, Zhang, Lichao, Marceau, Caleb, Stehr, Henning, Newman, Aaron M., Czerwinski, Debra K., Carlton, Victoria E. H., Moorhead, Martin, Faham, Malek, Kohrt, Holbrook E., Carette, Jan, Green, Michael R., Davis, Mark M., Levy, Ronald, Elias, Joshua E., Alizadeh, Ash A.

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Minimal residual disease negativity using deep sequencing is a major prognostic factor in multiple myeloma von Perrot, Aurore, Lauwers-Cances, Valerie, Corre, Jill, Robillard, Nelly, Hulin, Cyrille, Chretien, Marie-Lorraine, Dejoie, Thomas, Maheo, Sabrina, Stoppa, Anne-Marie, Pegourie, Brigitte, Karlin, Lionel, Garderet, Laurent, Arnulf, Bertrand, Doyen, Chantal, Meuleman, Nathalie, Royer, Bruno, Eveillard, Jean-Richard, Benboubker, Lotfi, Dib, Mamoun, Decaux, Olivier, Jaccard, Arnaud, Belhadj, Karim, Brechignac, Sabine, Kolb, Brigitte, Fohrer, Cecile, Mohty, Mohamad, Macro, Margaret, Richardson, Paul G., Carlton, Victoria, Moorhead, Martin, Willis, Tom, Faham, Malek, Anderson, Kenneth C., Harousseau, Jean-Luc, Leleu, Xavier, Facon, Thierry, Moreau, Philippe, Attal, Michel, Avet-Loiseau, Hervé, Munshi, Nikhil

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High-throughput, high-accuracy array-based resequencing von Zheng, Jianbiao, Moorhead, Martin, Weng, Li, Siddiqui, Farooq, Carlton, Victoria E.H, Ireland, James S, Lee, Liana, Peterson, Joseph, Wilkins, Jennifer, Lin, Sean, Kan, Zhengyan, Seshagiri, Somasekar, Davis, Ronald W, Faham, Malek

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Discovery of T Cell Receptor β Motifs Specific to HLA–B27–Positive Ankylosing Spondylitis by Deep Repertoire Sequence Analysis von Faham, Malek, Carlton, Victoria, Moorhead, Martin, Zheng, Jianbiao, Klinger, Mark, Pepin, Francois, Asbury, Thomas, Vignali, Marissa, Emerson, Ryan O., Robins, Harlan S., Ireland, James, Baechler‐Gillespie, Emily, Inman, Robert D.

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Rapid identification of somatic mutations in colorectal and breast cancer tissues using mismatch repair detection (MRD) von Bentivegna, Steven, Zheng, Jianbiao, Namsaraev, Eugeni, Carlton, Victoria E.H, Pavlicek, Adam, Moorhead, Martin, Siddiqui, Farooq, Wang, Zhiyong, Lee, Liana, Ireland, James S, Suyenaga, Kent, Willis, Thomas D, Faham, Malek, Seymour, Albert B

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Diverse somatic mutation patterns and pathway alterations in human cancers von Li, Li, Waring, Paul, Stern, Howard M, Stokoe, David, Zheng, Jianbiao, Eberhard, David A, Chaudhuri, Subhra, Moorhead, Martin, Wang, Weiru, Yue, Peng, Modrusan, Zora, Pujara, Kanan, Faham, Malek, Davis, David P, Eigenbrot, Charles, Tomsho, Lynn P, Janakiraman, Vasantharajan, Stinson, Jeremy, Bourgon, Richard, Carlton, Victoria E. H, Jaiswal, Bijay S, Seshagiri, Somasekar, Kaminker, Joshua S, Schuster, Stephan C, Kan, Zhengyan, Peters, Brock A, Cordes, Shaun, Zhang, Zemin, de Sauvage, Frederic J, Bhatt, Deepali, Haverty, Peter M, Yuan, Wenlin

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Cell-Selective Adeno-Associated Virus-Mediated SCN1A Gene Regulation Therapy Rescues Mortality and Seizure Phenotypes in a Dravet Syndrome Mouse Model and Is Well Tolerated in Nonh... von Tanenhaus, Annie, Stowe, Timothy, Young, Andrew, McLaughlin, John, Aeran, Rangoli, Lin, I Winnie, Li, Jianmin, Hosur, Raghavendra, Chen, Ming, Leedy, Jennifer, Chou, Tiffany, Pillay, Sirika, Vila, Maria Candida, Kearney, Jennifer A, Moorhead, Martin, Belle, Archana, Tagliatela, Stephanie

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Multiplexed Variation Scanning for 1,000 Amplicons in Hundreds of Patients Using Mismatch Repair Detection (MRD) on Tag Arrays von Faham, Malek, Jianbiao Zheng, Martin Moorhead, Fakhrai-Rad, Hossein, Eugeni Namsaraev, Kee Wong, Wang, Zhiyong, Shu G. Chow, Liana Lee, Kent Suyenaga, Jennifer Reichert, Andrew Boudreau, Eberle, James, Carsten Bruckner, Maneesh Jain, George Karlin-Neumann, Jones, Hywel B., Willis, Thomas D., Buxbaum, Joseph D., Davis, Ronald W.

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The prognostic value of the depth of response in multiple myeloma depends on the time of assessment, risk status and molecular subtype von Schinke, Carolina, Hoering, Antje, Wang, Hongwei, Carlton, Victoria, Thanandrarajan, Sharmilan, Deshpande, Shayu, Patel, Purvi, Molnar, Gabor, Susanibar, Sandra, Mohan, Meera, Mathur, Pankaj, Radhakrishnan, Muthukumar, Hoque, Shadiqul, Jo Kamimoto, Jorge, Grazziutti, Monica, van Rhee, Frits, Zangari, Maurizio, Insuasti-Beltran, Giovanni, Alapat, Daisy, Post, Ginell, Yaccoby, Shmuel, Epstein, Joshua, Rasche, Leo, Johnson, Sarah, Moorhead, Martin, Willis, Tom, Barlogie, Bart, Walker, Brian, Weinhold, Niels, Davies, Faith E, Morgan, Gareth J

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Highly multiplexed molecular inversion probe genotyping: over 10,000 targeted SNPs genotyped in a single tube assay von Hardenbol, Paul, Yu, Fuli, Belmont, John, Mackenzie, Jennifer, Bruckner, Carsten, Brundage, Tiffany, Boudreau, Andrew, Chow, Steve, Eberle, Jim, Erbilgin, Ayca, Falkowski, Mat, Fitzgerald, Ron, Ghose, Sy, Iartchouk, Oleg, Jain, Maneesh, Karlin-Neumann, George, Lu, Xiuhua, Miao, Xin, Moore, Bridget, Moorhead, Martin, Namsaraev, Eugeni, Pasternak, Shiran, Prakash, Eunice, Tran, Karen, Wang, Zhiyong, Jones, Hywel B, Davis, Ronald W, Willis, Thomas D, Gibbs, Richard A

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