Profiling the immune infiltrate in tumor samples at single cell resolution von Cheung, Denise, Adams, Bruce A., McDonnell, Wyatt J., Jaffe, David B., Puleo, Alaina R., Sukovich, David J, Reyes, Daniel J, Royall, Ariel J, Chi, Javelin C., Srinavas, Niranjan J, Krishnan, Sreenath J, Carli, Natasha J, Montesclaros, Luz J, Lau, Julia J, Stubbington, Michael J.T., Taylor, Sarah E.B.

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Massively parallel digital transcriptional profiling of single cells von Zheng, Grace X. Y., Terry, Jessica M., Belgrader, Phillip, Ryvkin, Paul, Bent, Zachary W., Wilson, Ryan, Ziraldo, Solongo B., Wheeler, Tobias D., McDermott, Geoff P., Zhu, Junjie, Gregory, Mark T., Shuga, Joe, Montesclaros, Luz, Underwood, Jason G., Masquelier, Donald A., Nishimura, Stefanie Y., Schnall-Levin, Michael, Wyatt, Paul W., Hindson, Christopher M., Bharadwaj, Rajiv, Wong, Alexander, Ness, Kevin D., Beppu, Lan W., Deeg, H. Joachim, McFarland, Christopher, Loeb, Keith R., Valente, William J., Ericson, Nolan G., Stevens, Emily A., Radich, Jerald P., Mikkelsen, Tarjei S., Hindson, Benjamin J., Bielas, Jason H.

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Haplotyping germline and cancer genomes with high-throughput linked-read sequencing von Zheng, Grace X Y, Lau, Billy T, Schnall-Levin, Michael, Jarosz, Mirna, Bell, John M, Hindson, Christopher M, Kyriazopoulou-Panagiotopoulou, Sofia, Masquelier, Donald A, Merrill, Landon, Terry, Jessica M, Mudivarti, Patrice A, Wyatt, Paul W, Bharadwaj, Rajiv, Makarewicz, Anthony J, Li, Yuan, Belgrader, Phillip, Price, Andrew D, Lowe, Adam J, Marks, Patrick, Vurens, Gerard M, Hardenbol, Paul, Montesclaros, Luz, Luo, Melissa, Greenfield, Lawrence, Wong, Alexander, Birch, David E, Short, Steven W, Bjornson, Keith P, Patel, Pranav, Hopmans, Erik S, Wood, Christina, Kaur, Sukhvinder, Lockwood, Glenn K, Stafford, David, Delaney, Joshua P, Wu, Indira, Ordonez, Heather S, Grimes, Susan M, Greer, Stephanie, Lee, Josephine Y, Belhocine, Kamila, Giorda, Kristina M, Heaton, William H, McDermott, Geoffrey P, Bent, Zachary W, Meschi, Francesca, Kondov, Nikola O, Wilson, Ryan, Bernate, Jorge A, Gauby, Shawn, Kindwall, Alex, Bermejo, Clara, Fehr, Adrian N, Chan, Adrian, Saxonov, Serge, Ness, Kevin D, Hindson, Benjamin J, Ji, Hanlee P

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High-Throughput Droplet Digital PCR System for Absolute Quantitation of DNA Copy Number von Hindson, Benjamin J, Ness, Kevin D, Masquelier, Donald A, Belgrader, Phillip, Heredia, Nicholas J, Makarewicz, Anthony J, Bright, Isaac J, Lucero, Michael Y, Hiddessen, Amy L, Legler, Tina C, Kitano, Tyler K, Hodel, Michael R, Petersen, Jonathan F, Wyatt, Paul W, Steenblock, Erin R, Shah, Pallavi H, Bousse, Luc J, Troup, Camille B, Mellen, Jeffrey C, Wittmann, Dean K, Erndt, Nicholas G, Cauley, Thomas H, Koehler, Ryan T, So, Austin P, Dube, Simant, Rose, Klint A, Montesclaros, Luz, Wang, Shenglong, Stumbo, David P, Hodges, Shawn P, Romine, Steven, Milanovich, Fred P, White, Helen E, Regan, John F, Karlin-Neumann, George A, Hindson, Christopher M, Saxonov, Serge, Colston, Bill W

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Technological advancements in multiomic single cell immune profiling and analysis von Royall, Ariel E, Sukovich, David J, Adams, Bruce A, Chi, Javelin C, Reyes, Daniel, Puleo, Alaina R, Krishnan, Sreenath, Jaffe, David B, McDonnell, Wyatt J, Cheung, Denise, Marrs, Samuel, Chen, Tina, Srinavas, Niranjan, Carli, Natasha, Montesclaros, Luz, Lau, Julia, Taylor, Sarah E. B.

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Abstract 5672: Facile generation of single-cell transcriptome and immune repertoire freshly isolated from clinical tumor specimens von Zhu, Junjie, Salahudeen, Ameen A., Giangarra, Valeria, Montesclaros, Luz, Sapida, Jerald, Sharifi, Osman, Lee, Josephine, Zheng, Grace X., Wagh, Dhananjay, Coller, John, Sabatti, Chiara, Kuo, Calvin J.

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Scalable and comprehensive characterization of antigen-specific CD8 T cells using multi-omics single cell analysis von Boutet, Stephane C, Walter, Dagmar, Stubbington, Michael J T, Pfeiffer, Katherine A, Lee, Josephine Y, Taylor, Sarah E B, Montesclaros, Luz, Lau, Julia K, Riordan, Daniel P, Barrio, Alvaro Martinez, Brix, Liselotte, Jacobsen, Kivin, Yeung, Bertrand, Zhao, Xinfang, Mikkelsen, Tarjei S

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Deep characterization of tumor microenvironments using single cell multi-omics analysis von Montesclaros, Luz, Boutet, Stephane C, Taylor, Sarah E B, Stubbington, Michael J T, Giangarra, Valeria, Lau, Julia K, Sapida, Jerald, Ziraldo, Solongo, Pfeiffer, Katherine A., Zheng, Grace, Barrio, Alvaro Martinez, Lee, Josephine Y, Marrs, Samuel, Wu, Kevin, Mikkelsen, Tarjei S

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Abstract 1013: Analyzing infiltrating B cell populations in the tumor microenvironment using single cell transcriptomics von Taylor, Sarah E., Boutet, Stephane, Giangarrá, Valeria, Zheng, Grace X., Barrio, Alvaro M., Montesclaros, Luz, Lee, Josephine, Marrs, Samuel, Wu, Kevin J., Ryvkin, Paul, Mikkelsen, Tarjei, Church, Deanna M.

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Abstract 987: Organoid-based characterization of patient tumors and microenvironments at single cell resolution von Salahudeen, Ameen A., Zhu, Junjie, Ju, Jihang, Batish, Arpit, Sutha, Ken, Neal, James T., Giangarra, Valeria, Montesclaros, Luz, Sapida, Jerald, Sharifi, Osman, Lee, Josephine, Zheng, Grace X., Wagh, Dhananjay A., Coller, John A., Neal, Joel W., Padda, Sukhmani K., Sabatti, Chiara, Kuo, Calvin J.

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Haplotyping germline and cancer genomes using high-throughput linked-read sequencing von Zheng, Grace X.Y., Lau, Billy T., Schnall-Levin, Michael, Jarosz, Mirna, Bell, John M., Hindson, Christopher M., Kyriazopoulou-Panagiotopoulou, Sofia, Masquelier, Donald A., Merrill, Landon, Terry, Jessica M., Mudivarti, Patrice A., Wyatt, Paul W., Bharadwaj, Rajiv, Makarewicz, Anthony J., Li, Yuan, Belgrader, Phillip, Price, Andrew D., Lowe, Adam J., Marks, Patrick, Vurens, Gerard M., Hardenbol, Paul, Montesclaros, Luz, Luo, Melissa, Greenfield, Lawrence, Wong, Alexander, Birch, David E., Short, Steven W., Bjornson, Keith P., Patel, Pranav, Hopmans, Erik S., Wood, Christina, Kaur, Sukhvinder, Lockwood, Glenn K., Stafford, David, Delaney, Joshua P., Wu, Indira, Ordonez, Heather S., Grimes, Susan M., Greer, Stephanie, Lee, Josephine Y., Belhocine, Kamila, Giorda, Kristina M., Heaton, William H., McDermott, Geoffrey P., Bent, Zachary W., Meschi, Francesca, Kondov, Nikola O., Wilson, Ryan, Bernate, Jorge A., Gauby, Shawn, Kindwall, Alex, Bermejo, Clara, Fehr, Adrian N., Chan, Adrian, Saxonov, Serge, Ness, Kevin D., Hindson, Benjamin J., Ji, Hanlee P.

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