Analyzing Endodontic Infections by Deep Coverage Pyrosequencing von Li, L., Hsiao, W.W.L., Nandakumar, R., Barbuto, S.M., Mongodin, E.F., Paster, B.J., Fraser-Liggett, C.M., Fouad, A.F.

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The Genome of Salinibacter ruber. Convergence and Gene Exchange among Hyperhalophilic Bacteria and Archaea von E. F. Mongodin, Nelson, K. E., Daugherty, S., DeBoy, R. T., J. Wister, Khouri, H., Weidman, J., D. A. Walsh, R. T. Papke, G. Sanchez Perez, Sharma, A. K., Nesbø, C. L., MacLeod, D., E. Bapteste, Doolittle, W. F., R. L. Charlebois, B. Legault, F. Rodriguez-Valera

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Evolution of catabolic pathways : Genomic insights into microbial s-triazine metabolism von SHAPIR, N, MONGODIN, E. F, SADOWSKY, M. J, DAUGHERTY, S. C, NELSON, K. E, WACKETT, L. P

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Immune status, and not HIV infection or exposure, drives the development of the oral microbiota von Coker, M. O., Mongodin, E. F., El-Kamary, S. S., Akhigbe, P., Obuekwe, O., Omoigberale, A., Langenberg, P., Enwonwu, C., Hittle, L., Blattner, W. A., Charurat, M.

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Genome stability of Lyme disease spirochetes: comparative genomics of Borrelia burgdorferi plasmids von Casjens, Sherwood R, Mongodin, Emmanuel F, Qiu, Wei-Gang, Luft, Benjamin J, Schutzer, Steven E, Gilcrease, Eddie B, Huang, Wai Mun, Vujadinovic, Marija, Aron, John K, Vargas, Levy C, Freeman, Sam, Radune, Diana, Weidman, Janice F, Dimitrov, George I, Khouri, Hoda M, Sosa, Julia E, Halpin, Rebecca A, Dunn, John J, Fraser, Claire M

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Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation von Mongodin, Emmanuel F, Casjens, Sherwood R, Bruno, John F, Xu, Yun, Drabek, Elliott Franco, Riley, David R, Cantarel, Brandi L, Pagan, Pedro E, Hernandez, Yozen A, Vargas, Levy C, Dunn, John J, Schutzer, Steven E, Fraser, Claire M, Qiu, Wei-Gang, Luft, Benjamin J

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Whole-Genome Sequences of Thirteen Isolates of Borrelia burgdorferi von SCHUTZER, Steven E, FRASER-LIGGETT, Claire M, CASJENS, Sherwood R, QIU, Wei-Gang, DUNN, John J, MONGODIN, Emmanuel F, LUFT, Benjamin J

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Whole Genome Sequence of an Unusual Borrelia burgdorferi Sensu Lato Isolate von CASJENS, Sherwood R, FRASER-LIGGETT, Claire M, MONGODIN, Emmanuel F, QIU, Wei-Gang, DUNN, John J, LUFT, Benjamin J, SCHUTZER, Steven E

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A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes von Haft, Daniel H, Selengut, Jeremy, Mongodin, Emmanuel F, Nelson, Karen E

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Whole-Genome Sequences of Two Borrelia afzelii and Two Borrelia garinii Lyme Disease Agent Isolates von Casjens, Sherwood R, Mongodin, Emmanuel F, Qiu, Wei-Gang, Dunn, John J, Luft, Benjamin J, Fraser-Liggett, Claire M, Schutzer, Steve E

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Whole-Genome Sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmanii von Schutzer, Steven E, Fraser-Liggett, Claire M, Qiu, Wei-Gang, Kraiczy, Peter, Mongodin, Emmanuel F, Dunn, John J, Luft, Benjamin J, Casjens, Sherwood R

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Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus von Diep, Binh An, Gill, Steven R, Chang, Richard F, Phan, Tiffany HaiVan, Chen, Jason H, Davidson, Matthew G, Lin, Felice, Lin, Jessica, Carleton, Heather A, Mongodin, Emmanuel F, Sensabaugh, George F, Perdreau-Remington, Françoise

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Insights on Evolution of Virulence and Resistance from the Complete Genome Analysis of an Early Methicillin-Resistant Staphylococcus aureus Strain and a Biofilm-Producing Methicill... von GILL, Steven R, FOUTS, Derrick E, DODSON, Robert J, DAUGHERTY, Sean C, MADUPU, Ramana, ANGIUOLI, Samuel V, DURKIN, A. Scott, HAFT, Daniel H, VAMATHEVAN, Jessica, KHOURI, Hoda, UTTERBACK, Terry, LEE, Chris, ARCHER, Gordon L, DIMITROV, George, LINGXIA JIANG, HAIYING QIN, JAN WEIDMAN, TRAN, Kevin, KANG, Kathy, HANCE, Ioana R, NELSON, Karen E, FRASER, Claire M, MONGODIN, Emmanuel F, DEBOY, Robert T, RAVEL, Jacques, PAULSEN, Ian T, KOLONAY, James F, BRINKAC, Lauren, BEANAN, Mauren

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Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species von Nelson, K.E, Fouts, D.E, Mongodin, E.F, Ravel, J, DeBoy, R.T, Kolonay, J.F, Rasko, D.A, Angiuoli, S.V, Gill, S.R, Paulsen, I.T, Wonderling, L.D, Uhlich, G.A, Bayles, D.O, Luchansky, J.B

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Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species von Fouts, Derrick E, Mongodin, Emmanuel F, Mandrell, Robert E, Miller, William G, Rasko, David A, Ravel, Jacques, Brinkac, Lauren M, DeBoy, Robert T, Parker, Craig T, Daugherty, Sean C, Dodson, Robert J, Durkin, A. Scott, Madupu, Ramana, Sullivan, Steven A, Shetty, Jyoti U, Ayodeji, Mobolanle A, Shvartsbeyn, Alla, Schatz, Michael C, Badger, Jonathan H, Fraser, Claire M, Nelson, Karen E

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Fast, adaptive evolution at a bacterial host-resistance locus: The PFam54 gene array in Borrelia burgdorferi von Wywial, Ewa, Haven, James, Casjens, Sherwood R., Hernandez, Yozen A., Singh, Shaneen, Mongodin, Emmanuel F., Fraser-Liggett, Claire M., Luft, Benjamin J., Schutzer, Steven E., Qiu, Wei-Gang

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P1.034Biomarkers of Cigarette Smoking and Association with the Vaginal Microbiota von Brotman, R M, Ravel, J, Gajer, P, Fadrosh, D, Mongodin, E F, Glover, E D, Rath, J M

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P1.034 Biomarkers of Cigarette Smoking and Association with the Vaginal Microbiota von Brotman, R M, Ravel, J, Gajer, P, Fadrosh, D, Mongodin, E F, Glover, E D, Rath, J M

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A global metagenomic map of urban microbiomes and antimicrobial resistance von Danko, D, Bezdan, D, Afshin, EE, Ahsanuddin, S, Bhattacharya, C, Butler, DJ, Chng, KR, Donnellan, D, Hecht, J, Jackson, K, Kuchin, K, Karasikov, M, Lyons, A, Mak, L, Meleshko, D, Mustafa, H, Mutai, B, Neches, RY, Ng, A, Nikolayeva, O, Nikolayeva, T, Png, E, Ryon, KA, Sanchez, JL, Shaaban, H, Sierra, MA, Thomas, D, Young, B, Abudayyeh, OO, Alicea, J, Bhattacharyya, M, Blekhman, R, Castro-Nallar, E, Cañas, AM, Chatziefthimiou, AD, Crawford, RW, De Filippis, F, Deng, Y, Desnues, C, Dias-Neto, E, Dybwad, M, Elhaik, E, Ercolini, D, Frolova, A, Gankin, D, Gootenberg, JS, Graf, AB, Green, DC, Hajirasouliha, I, Hastings, JJA, Hernandez, M, Iraola, G, Jang, S, Kahles, A, Kelly, FJ, Knights, K, Kyrpides, NC, Łabaj, PP, Lee, PKH, Leung, MHY, Ljungdahl, PO, Mason-Buck, G, McGrath, K, Meydan, C, Mongodin, EF, Moraes, MO, Nagarajan, N, Nieto-Caballero, M, Noushmehr, H, Oliveira, M, Ossowski, S, Osuolale, OO, Özcan, O, Paez-Espino, D, Rascovan, N, Richard, H, Rätsch, G, Schriml, LM, Semmler, T, Sezerman, OU, Shi, L, Shi, T, Siam, R, Song, LH, Suzuki, H, Court, DS, Tighe, SW, Tong, X, Udekwu, KI, Ugalde, JA, Valentine, B, Vassilev, DI, Vayndorf, EM, Velavan, TP, Wu, J, Zambrano, MM, Zhu, J, Zhu, S, Mason, CE, International MetaSUB Consortium

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Chromosome Evolution in the Thermotogales: Large-Scale Inversions and Strain Diversification of CRISPR Sequences von DEBOY, Robert T, MONGODIN, Emmanuel F, EMERSON, Joanne B, NELSON, Karen E

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