The Lifespan and Turnover of Microglia in the Human Brain von Réu, Pedro, Khosravi, Azadeh, Bernard, Samuel, Mold, Jeff E., Salehpour, Mehran, Alkass, Kanar, Perl, Shira, Tisdale, John, Possnert, Göran, Druid, Henrik, Frisén, Jonas

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Comparison of whole genome amplification techniques for human single cell exome sequencing von Borgström, Erik, Paterlini, Marta, Mold, Jeff E, Frisen, Jonas, Lundeberg, Joakim

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Cell generation dynamics underlying naive T-cell homeostasis in adult humans von Mold, Jeff E, Réu, Pedro, Olin, Axel, Bernard, Samuel, Michaëlsson, Jakob, Rane, Sanket, Yates, Andrew, Khosravi, Azadeh, Salehpour, Mehran, Possnert, Göran, Brodin, Petter, Frisén, Jonas

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Antibody-secreting plasma cells persist for decades in human intestine von Landsverk, Ole J B, Snir, Omri, Casado, Raquel Bartolomé, Richter, Lisa, Mold, Jeff E, Réu, Pedro, Horneland, Rune, Paulsen, Vemund, Yaqub, Sheraz, Aandahl, Einar Martin, Øyen, Ole M, Thorarensen, Hildur Sif, Salehpour, Mehran, Possnert, Göran, Frisén, Jonas, Sollid, Ludvig M, Baekkevold, Espen S, Jahnsen, Frode L

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Identification of cinnabarinic acid as a novel endogenous aryl hydrocarbon receptor ligand that drives IL-22 production von Lowe, Margaret M, Mold, Jeff E, Kanwar, Bittoo, Huang, Yong, Louie, Alexander, Pollastri, Michael P, Wang, Cuihua, Patel, Gautam, Franks, Diana G, Schlezinger, Jennifer, Sherr, David H, Silverstone, Allen E, Hahn, Mark E, McCune, Joseph M

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Activation of a neural stem cell transcriptional program in parenchymal astrocytes von Magnusson, Jens P., Zamboni, Margherita, Santopolo, Giuseppe, Mold, Jeff E., Barrientos-Somarribas, Mauricio, Talavera-Lopez, Carlos, Andersson, Bjiirn, Frisen, Jonas

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Transplanted Bone Marrow-Derived Cells Contribute to Human Adipogenesis von Rydén, Mikael, Uzunel, Mehmet, Hård, Joanna L., Borgström, Erik, Mold, Jeff E., Arner, Erik, Mejhert, Niklas, Andersson, Daniel P., Widlund, Yvonne, Hassan, Moustapha, Jones, Christina V., Spalding, Kirsty L., Svahn, Britt-Marie, Ahmadian, Afshin, Frisén, Jonas, Bernard, Samuel, Mattsson, Jonas, Arner, Peter

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Long-read whole-genome analysis of human single cells von Hård, Joanna, Mold, Jeff E., Eisfeldt, Jesper, Tellgren-Roth, Christian, Häggqvist, Susana, Bunikis, Ignas, Contreras-Lopez, Orlando, Chin, Chen-Shan, Nordlund, Jessica, Rubin, Carl-Johan, Feuk, Lars, Michaëlsson, Jakob, Ameur, Adam

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Integrative spatial and genomic analysis of tumor heterogeneity with Tumoroscope von Shafighi, Shadi, Geras, Agnieszka, Jurzysta, Barbara, Sahaf Naeini, Alireza, Filipiuk, Igor, Ra̧czkowska, Alicja, Toosi, Hosein, Koperski, Łukasz, Thrane, Kim, Engblom, Camilla, Mold, Jeff E., Chen, Xinsong, Hartman, Johan, Nowis, Dominika, Carbone, Alessandra, Lagergren, Jens, Szczurek, Ewa

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Identifying T Cell Receptors from High-Throughput Sequencing: Dealing with Promiscuity in TCRα and TCRβ Pairing von Lee, Edward S, Thomas, Paul G, Mold, Jeff E, Yates, Andrew J

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Conbase: a software for unsupervised discovery of clonal somatic mutations in single cells through read phasing von Hård, Joanna, Al Hakim, Ezeddin, Kindblom, Marie, Björklund, Åsa K, Sennblad, Bengt, Demirci, Ilke, Paterlini, Marta, Reu, Pedro, Borgström, Erik, Ståhl, Patrik L, Michaelsson, Jakob, Mold, Jeff E, Frisén, Jonas

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Analysis of allelic expression patterns in clonal somatic cells by single-cell RNA–seq von Reinius, Björn, Mold, Jeff E, Ramsköld, Daniel, Deng, Qiaolin, Johnsson, Per, Michaëlsson, Jakob, Frisén, Jonas, Sandberg, Rickard

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Probabilistic count matrix factorization for single cell expression data analysis von Durif, Ghislain, Modolo, Laurent, Mold, Jeff E, Lambert-Lacroix, Sophie, Picard, Franck

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Expansions of adaptive-like NK cells with a tissue-resident phenotype in human lung and blood von Brownlie, Demi, Scharenberg, Marlena, Mold, Jeff E., Hård, Joanna, Kekäläinen, Eliisa, Buggert, Marcus, Nguyen, Son, Wilson, Jennifer N., Al-Ameri, Mamdoh, Ljunggren, Hans-Gustaf, Marquardt, Nicole, Michaëlsson, Jakob

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Fetal and Adult Hematopoietic Stem Cells Give Rise to Distinct T Cell Lineages in Humans von Mold, Jeff E, Venkatasubrahmanyam, Shivkumar, Burt, Trevor D, Michaëlsson, Jakob, Rivera, Jose M, Galkina, Sofiya A, Weinberg, Kenneth, Stoddart, Cheryl A, McCune, Joseph M

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Spatial transcriptomics of B cell and T cell receptors reveals lymphocyte clonal dynamics von Engblom, Camilla, Thrane, Kim, Lin, Qirong, Andersson, Alma, Toosi, Hosein, Chen, Xinsong, Steiner, Embla, Lu, Chang, Mantovani, Giulia, Hagemann-Jensen, Michael, Saarenpää, Sami, Jangard, Mattias, Saez-Rodriguez, Julio, Michaëlsson, Jakob, Hartman, Johan, Lagergren, Jens, Mold, Jeff E, Lundeberg, Joakim, Frisén, Jonas

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Maternal Alloantigens Promote the Development of Tolerogenic Fetal Regulatory T Cells in Utero von Mold, Jeff E, Michaëlsson, Jakob, Burt, Trevor D, Muench, Marcus O, Beckerman, Karen P, Busch, Michael P, Lee, Tzong-Hae, Nixon, Douglas F, McCune, Joseph M

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High dimensional classification with combined adaptive sparse PLS and logistic regression von Durif, Ghislain, Modolo, Laurent, Michaelsson, Jakob, Mold, Jeff E, Lambert-Lacroix, Sophie, Picard, Franck

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A biliary immune landscape map of primary sclerosing cholangitis reveals a dominant network of neutrophils and tissue-resident T cells von Zimmer, Christine L, von Seth, Erik, Buggert, Marcus, Strauss, Otto, Hertwig, Laura, Nguyen, Son, Wong, Alicia, Zotter, Chiara, Berglin, Lena, Michaëlsson, Jacob, Reuterwall Hansson, Marcus, Arnelo, Urban, Sparrelid, Ernesto, Ellis, Ewa C, Söderholm, Johan D, Keita, Åsa V, Holm, Kristian, Özenci, Volkan, Hov, Johannes Espolin Roksund, Mold, Jeff E, Cornillet, Martin, Ponzetta, Andrea, Bergquist, Annika, Björkström, Niklas K

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Intestinal damage is required for the pro-inflammatory differentiation of commensal CBir1-specific T cells von Sorini, Chiara, Cardoso, Rebeca F., Tripathi, Kumar P., Mold, Jeff E., Diaz, Oscar E., Holender, Yael, Kern, Bianca C., Czarnewski, Paulo, Gagliani, Nicola, Villablanca, Eduardo J.

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