MAKER-P: A Tool Kit for the Rapid Creation, Management, and Quality Control of Plant Genome Annotations von Campbell, Michael S., Law, MeiYee, Holt, Carson, Stein, Joshua C., Moghe, Gaurav D., Hufnagel, David E., Lei, Jikai, Achawanantakun, Rujira, Jiao, Dian, Lawrence, Carolyn J., Ware, Doreen, Shiu, Shin-Han, Childs, Kevin L., Sun, Yanni, Jiang, Ning, Yandell, Mark

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Machine learning: A powerful tool for gene function prediction in plants von Mahood, Elizabeth H., Kruse, Lars H., Moghe, Gaurav D.

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The study of plant specialized metabolism: Challenges and prospects in the genomics era von Moghe, Gaurav D., Kruse, Lars H.

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Untargeted metabolomics of purple and orange-fleshed sweet potatoes reveals a large structural diversity of anthocyanins and flavonoids von Bennett, Alexandra A., Mahood, Elizabeth H., Fan, Kai, Moghe, Gaurav D.

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The causes and molecular consequences of polyploidy in flowering plants von Moghe, Gaurav D., Shiu, Shin-Han

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Evolutionary routes to biochemical innovation revealed by integrative analysis of a plant-defense related specialized metabolic pathway von Moghe, Gaurav D, Leong, Bryan J, Hurney, Steven M, Daniel Jones, A, Last, Robert L

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Characteristics of Plant Essential Genes Allow for within- and between-Species Prediction of Lethal Mutant Phenotypes von Lloyd, John P., Seddon, Alexander E., Moghe, Gaurav D., Simenc, Matthew C., Shiu, Shin-Han

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Acylsugars protect Nicotiana benthamiana against insect herbivory and desiccation von Feng, Honglin, Acosta-Gamboa, Lucia, Kruse, Lars H., Tracy, Jake D., Chung, Seung Ho, Nava Fereira, Alba Ruth, Shakir, Sara, Xu, Hongxing, Sunter, Garry, Gore, Michael A., Casteel, Clare L., Moghe, Gaurav D., Jander, Georg

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Coexpression Analysis Identifies Two Oxidoreductases Involved in the Biosynthesis of the Monoterpene Acid Moiety of Natural Pyrethrin Insecticides in Tanacetum cinerariifolium von Xu, Haiyang, Moghe, Gaurav D., Wiegert-Rininger, Krystle, Schilmiller, Anthony L., Barry, Cornelius S., Last, Robert L., Pichersky, Eran

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The push and pull of plant specialized metabolism underlies a long-standing, colorful mystery von Moghe, Gaurav D., Smith, Stacey D.

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Phylogenomic analyses across land plants reveals motifs and coexpression patterns useful for functional prediction in the BAHD acyltransferase family von Kruse, Lars H, Fehr, Benjamin, Chobirko, Jason D, Moghe, Gaurav D

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Something Old, Something New: Conserved Enzymes and the Evolution of Novelty in Plant Specialized Metabolism von Moghe, Gaurav D., Last, Robert L.

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Evolutionary characteristics of intergenic transcribed regions indicate rare novel genes and widespread noisy transcription in the Poaceae von Lloyd, John P., Bowman, Megan J., Azodi, Christina B., Sowers, Rosalie P., Moghe, Gaurav D., Childs, Kevin L., Shiu, Shin-Han

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Growing a glue factory: Open questions in laticifer development von Johnson, Arielle R., Moghe, Gaurav D., Frank, Margaret H.

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Characteristics and Significance of Intergenic Polyadenylated RNA Transcription in Arabidopsis von Moghe, Gaurav D., Lehti-Shiu, Melissa D., Seddon, Alex E., Yin, Shan, Chen, Yani, Juntawong, Piyada, Brandizzi, Federica, Bailey-Serres, Julia, Shiu, Shin-Han

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A Feedback-Insensitive Isopropylmalate Synthase Affects Acylsugar Composition in Cultivated and Wild Tomato von Ning, Jing, Moghe, Gaurav D., Leong, Bryan, Kim, Jeongwoon, Ofner, Itai, Wang, Zhenzhen, Adams, Christopher, Jones, A. Daniel, Zamir, Dani, Last, Robert L.

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Consequences of Whole-Genome Triplication as Revealed by Comparative Genomic Analyses of the Wild Radish Raphanus raphanistrum and Three Other Brassicaceae Species von Moghe, Gaurav D., Hufnagel, David E., Tang, Haibao, Xiao, Yongli, Dworkin, Ian, Town, Christopher D., Conner, Jeffrey K., Shiu, Shin-Han

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Functionally Divergent Alleles and Duplicated Loci Encoding an Acyltransferase Contribute to Acylsugar Metabolite Diversity in Solanum Trichomes von Schilmiller, Anthony L., Moghe, Gaurav D., Fan, Pengxiang, Ghosh, Banibrata, Ning, Jing, Jones, A. Daniel, Last, Robert L.

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Orthology‐based analysis helps map evolutionary diversification and predict substrate class use of BAHD acyltransferases von Kruse, Lars H., Weigle, Austin T., Irfan, Mohammad, Martínez‐Gómez, Jesús, Chobirko, Jason D., Schaffer, Jason E., Bennett, Alexandra A., Specht, Chelsea D., Jez, Joseph M., Shukla, Diwakar, Moghe, Gaurav D.

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Specialized Metabolism in a Nonmodel Nightshade: Trichome Acylinositol Biosynthesis(1)([OPEN]) von Leong, Bryan J., Hurney, Steven M., Fiesel, Paul D., Moghe, Gaurav D., Jones, A. Daniel, Last, Robert L.

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