A Whole-Genome Assembly of Drosophila von Myers, Eugene W., Sutton, Granger G., Delcher, Art L., Dew, Ian M., Fasulo, Dan P., Flanigan, Michael J., Kravitz, Saul A., Mobarry, Clark M., Knut H. J. Reinert, Remington, Karin A., Anson, Eric L., Bolanos, Randall A., Chou, Hui-Hsien, Jordan, Catherine M., Halpern, Aaron L., Lonardi, Stefano, Beasley, Ellen M., Brandon, Rhonda C., Chen, Lin, Dunn, Patrick J., Lai, Zhongwu, Liang, Yong, Nusskern, Deborah R., Zhan, Ming, Zhang, Qing, Zheng, Xiangqun, Rubin, Gerald M., Adams, Mark D., Venter, J. Craig

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A space-efficient construction of the Burrows-Wheeler transform for genomic data von Lippert, Ross A, Mobarry, Clark M, Walenz, Brian P

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Whole-Genome Shotgun Assembly and Comparison of Human Genome Assemblies von Istrail, Sorin, Sutton, Granger G., Florea, Liliana, Halpern, Aaron L., Mobarry, Clark M., Lippert, Ross, Walenz, Brian, Shatkay, Hagit, Dew, Ian, Miller, Jason R., Flanigan, Michael J., Edwards, Nathan J., Bolanos, Randall, Fasulo, Daniel, Halldorsson, Bjarni V., Hannenhalli, Sridhar, Turner, Russell, Yooseph, Shibu, Lu, Fu, Nusskern, Deborah R., Shue, Bixiong Chris, Zheng, Xiangqun Holly, Zhong, Fei, Delcher, Arthur L., Huson, Daniel H., Kravitz, Saul A., Mouchard, Laurent, Reinert, Knut, Remington, Karin A., Clark, Andrew G., Waterman, Michael S., Eichler, Evan E., Adams, Mark D., Hunkapiller, Michael W., Myers, Eugene W., Venter, J. Craig

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Design of a compartmentalized shotgun assembler for the human genome von Huson, Daniel H., Reinert, Knut, Kravitz, Saul A., Remington, Karin A., Delcher, Art L., Dew, Ian M., Flanigan, Mike, Halpern, Aaron L., Lai, Zhongwu, Mobarry, Clark M., Sutton, Granger G., Myers, Eugene W.

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A Comparison of Whole-Genome Shotgun-Derived Mouse Chromosome 16 and the Human Genome von Mural, Richard J., Adams, Mark D., Smith, Hamilton O., George L. Gabor Miklos, Halpern, Aaron, Li, Peter W., Salzberg, Steven L., Holt, Robert A., Lu, Fu, Gan, Weiniu, Heiman, Thomas J., Milshina, Natalia V., Wang, Aihui, Wang, Jian, Ye, Jane, Yooseph, Shibu, Zhao, Qi, Zheng, Liansheng, Biddick, Kendra, Bolanos, Randall, Delcher, Arthur L., Dew, Ian M., Fasulo, Daniel, Huson, Daniel H., Miller, Jason R., Mobarry, Clark M., Reinert, Knut, Zhang, Qing, Nusskern, Deborah R., Lei, Yiding, Guan, Ping, Ji, Rui-Ru, Wang, Zhen-Yuan, Zhong, Fei, Chiang, Chia-Chien, Yandell, Mark, Wortman, Jennifer R., Amanatides, Peter G., Pratts, Eric C., Johnson, Jeffery E., Dodson, Kristina L., Gropman, Barry, Rusch, Douglas B., Venter, Eli, Wang, Mei, Houck, Jarrett T., Tompkins, Donald E., Haynes, Charles, Chin, Soo H., Allen, David R., Li, Kelvin, Liu, Xiangjun, Levitsky, Alexander A., Majoros, William H., Xia, Ashley C., Newman, Matthew H., Ali, Feroze, Baldwin-Pitts, Danita, Caulk, Parris M., Angela Center, Chen, Yen-Hui, Cheng, Ming-Lai, Coyne, My D., Crowder, Michelle, Danaher, Steven, Davenport, Lionel B., Ferriera, Steven, Fosler, Carl R., Gire, Harold C., Gluecksmann, Andres, Hart, Brit, Haynes, Jason, Johns, David, Kline, Leslie, Ma, Daniel S., MacCawley, Steven, Magoon, Anand, Mann, Felecia, May, David, McIntosh, Tina C., Puri, Vinita N., Qureshi, Hina, Raley, John C., Reardon, Matthew S., Regier, Megan A., Rogers, Yu-Hui C., Romblad, Deanna L., Scott, Richard, Sitter, Cynthia D., Smallwood, Michella, Sprague, Arlan C., Strong, Renee V., Sylvester, Karena, Tint, Tsonis, Christopher, Wang, Gary, Wang, George, Windsor, Sandra M., Wolfe, Keriellen, Chaturvedi, Kabir

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HRUNTING: a distributed shared memory system for the BEOWULF parallel workstation von Crawford, J.A., Mobarry, C.M.

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Method and system for the assembly of a whole genome using a shot-gun data set von REINERT KNUT, MYERS GENE W, KRAVITZ SAUL A, FLANIGAN MICHAEL J, DELCHER ARTHUR L, SUTTON GRANGER G, REMINGTON KARIN A, DEW IAN M, MOBARRY CLARK M

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Method and system for the assembly of a whole genome using a shot-gun data set von Myers, Gene W, Delcher, Arthur L, Dew, Ian M, Flanigan, Michael J, Kravitz, Saul A, Mobarry, Clark M, Reinert, Knut, Remington, Karin A, Sutton, Granger G

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METHOD AND SYSTEM FOR THE ASSEMBLY OF A WHOLE GENOME USING A SHOT-GUN DATA SET von SUTTON, GRANGER G, MOBARRY, CLARK M, FLANIGAN, MICHAEL J, REINERT, KNUT, MYERS, GENE W, REMINGTON, KARIN A, KRAVITZ, SAUL A, DELCHER, ARTHUR L, DEW, IAN M

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METHOD AND SYSTEM FOR THE ASSEMBLY OF A WHOLE GENOME USING A SHOT-GUN DATA SET von DELCHER, ARTHUR, L, MOBARRY, CLARK, M, DEW, IAN, M, REINERT, KNUT, FLANIGAN, MICHAEL, J, SUTTON, GRANGER, G, MYERS, GENE, W, KRAVITZ, SAUL, A, REMINGTON, KARIN, A

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METHOD AND SYSTEM FOR THE ASSEMBLY OF A WHOLE GENOME USING A SHOT-GUN DATA SET von DELCHER, ARTHUR, L, MOBARRY, CLARK, M, DEW, IAN, M, REINERT, KNUT, FLANIGAN, MICHAEL, J, SUTTON, GRANGER, G, MYERS, GENE, W, KRAVITZ, SAUL, A, REMINGTON, KARIN, A

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Method and system for the assembly of a whole genome using a shot-gun data set von SAUL A. KRAVITZ, CLARK M. MOBARRY, ARTHUR L. DELCHER, MICHAEL J. FLANIGAN, KNUT REINERT, GRANGER G. SUTTON III, GENE W. MYERS, IAN M. DEW, KARIN A. REMINGTON

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METHOD AND SYSTEM FOR THE ASSEMBLY OF A WHOLE GENOME USING A SHOT-GUN DATA SET von SUTTON, GRANGER G, MOBARRY, CLARK M, FLANIGAN, MICHAEL J, REINERT, KNUT, MYERS, GENE W, REMINGTON, KARIN A, KRAVITZ, SAUL A, DELCHER, ARTHUR L, DEW, IAN M

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METHOD AND SYSTEM FOR THE ASSEMBLY OF A WHOLE GENOME USING A SHOT-GUN DATA SET von DELCHER, ARTHUR, L, MOBARRY, CLARK, M, DEW, IAN, M, REINERT, KNUT, FLANIGAN, MICHAEL, J, SUTTON, GRANGER, G, MYERS, GENE, W, KRAVITZ, SAUL, A, REMINGTON, KARIN, A

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PARAMESH: A parallel adaptive mesh refinement community toolkit von MacNeice, Peter, Olson, Kevin M., Mobarry, Clark, de Fainchtein, Rosalinda, Packer, Charles

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Gene and alternative splicing annotation with AIR von Florea, Liliana, Di Francesco, Valentina, Miller, Jason, Turner, Russell, Yao, Alison, Harris, Michael, Walenz, Brian, Mobarry, Clark, Merkulov, Gennady V, Charlab, Rosane, Dew, Ian, Deng, Zuoming, Istrail, Sorin, Li, Peter, Sutton, Granger

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ThurGood: evaluating assembly-to-assembly mapping von Shatkay, Hagit, Miller, Jason, Mobarry, Clark, Flanigan, Michael, Yooseph, Shibu, Sutton, Granger

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PARAMESH: A parallel adaptive mesh refinement community toolkit von MacNeice, Peter

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PARAMESH: A parallel adaptive mesh refinement community toolkit von MacNeice, Peter

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PARAMESH: A Parallel Adaptive Mesh Refinement Community Toolkit von MacNeice, Peter, Olson, Kevin M., Mobarry, Clark, deFainchtein, Rosalinda, Packer, Charles

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