SHRiMP2: Sensitive yet Practical Short Read Mapping von DAVID, Matei, DZAMBA, Misko, LISTER, Dan, ILIE, Lucian, BRUDNO, Michael

Volltext

Genomic analysis of diffuse intrinsic pontine gliomas identifies three molecular subgroups and recurrent activating ACVR1 mutations von Buczkowicz, Pawel, Hoeman, Christine, Rakopoulos, Patricia, Pajovic, Sanja, Letourneau, Louis, Dzamba, Misko, Morrison, Andrew, Lewis, Peter, Bouffet, Eric, Bartels, Ute, Zuccaro, Jennifer, Agnihotri, Sameer, Ryall, Scott, Barszczyk, Mark, Chornenkyy, Yevgen, Bourgey, Mathieu, Bourque, Guillaume, Montpetit, Alexandre, Cordero, Francisco, Castelo-Branco, Pedro, Mangerel, Joshua, Tabori, Uri, Ho, King Ching, Huang, Annie, Taylor, Kathryn R, Mackay, Alan, Bendel, Anne E, Nazarian, Javad, Fangusaro, Jason R, Karajannis, Matthias A, Zagzag, David, Foreman, Nicholas K, Donson, Andrew, Hegert, Julia V, Smith, Amy, Chan, Jennifer, Lafay-Cousin, Lucy, Dunn, Sandra, Hukin, Juliette, Dunham, Chris, Scheinemann, Katrin, Michaud, Jean, Zelcer, Shayna, Ramsay, David, Cain, Jason, Brennan, Cameron, Souweidane, Mark M, Jones, Chris, Allis, C David, Brudno, Michael, Becher, Oren, Hawkins, Cynthia

Volltext

A novel strain of cynomolgus macaque cytomegalovirus: implications for host-virus co-evolution von Russell, Justen N Hoffman, Marsh, Angie K, Willer, David O, Ambagala, Aruna P N, Dzamba, Misko, Chan, Jacqueline K, Pilon, Richard, Fournier, Jocelyn, Brudno, Michael, Antony, Joseph M, Sandstrom, Paul, Evans, Ben J, MacDonald, Kelly S

Volltext

Genomic Sequencing and Characterization of Cynomolgus Macaque Cytomegalovirus von Marsh, Angie K, Willer, David O, Ambagala, Aruna P. N, Dzamba, Misko, Chan, Jacqueline K, Pilon, Richard, Fournier, Jocelyn, Sandstrom, Paul, Brudno, Michael, MacDonald, Kelly S

Volltext

Detecting copy number variation with mated short reads von Medvedev, Paul, Fiume, Marc, Dzamba, Misko, Smith, Tim, Brudno, Michael

Volltext

Integrated (epi)-Genomic Analyses Identify Subgroup-Specific Therapeutic Targets in CNS Rhabdoid Tumors von Torchia, Jonathon, Golbourn, Brian, Ho, King Ching, Sin-Chan, Patrick, Vasiljevic, Alexandre, Norman, Joseph D., Guilhamon, Paul, Garzia, Livia, Agamez, Natalia R., Chan, Tiffany S., Picard, Daniel, de Antonellis, Pasqualino, Khuong-Quang, Dong-Anh, Planello, Aline C., Zeller, Constanze, Barsyte-Lovejoy, Dalia, Lafay-Cousin, Lucie, Letourneau, Louis, Bourgey, Mathieu, Yu, Man, Dzamba, Misko, Barszczyk, Mark, Medina, Tiago, Riemenschneider, Alexandra N., Morrissy, A. Sorana, Ra, Young-Shin, Ramaswamy, Vijay, Remke, Marc, Dunham, Christopher P., Yip, Stephen, Ng, Ho-keung, Lu, Jian-Qiang, Mehta, Vivek, Albrecht, Steffen, Pimentel, Jose, Chan, Jennifer A., Somers, Gino R., Faria, Claudia C., Roque, Lucia, Fouladi, Maryam, Moore, Andrew S., Wang, Yin, Hansford, Jordan R., Catchpoole, Daniel, Birks, Diane K., Foreman, Nicholas K., Strother, Doug, Klekner, Almos, Bognár, Laszló, Garami, Miklós, Hauser, Péter, Hortobágyi, Tibor, Wilson, Beverly, Hukin, Juliette, Carret, Anne-Sophie, Van Meter, Timothy E., Hwang, Eugene I., Gajjar, Amar, Chiou, Shih-Hwa, Toledano, Helen, Fults, Daniel, Wataya, Takafumi, Fryer, Chris, Eisenstat, David D., Fleming, Adam J., Johnston, Donna L., Michaud, Jean, Hammond, Robert, Afzal, Samina, Ramsay, David A., Sirachainan, Nongnuch, Hongeng, Suradej, Larbcharoensub, Noppadol, Grundy, Richard G., Fangusaro, Jason R., Druker, Harriet, Bartels, Ute, Grant, Ronald, Malkin, David, Nicolaides, Theodore, Tihan, Tarik, Majewski, Jacek, Bourque, Guillaume, Bader, Gary D., Gillespie, G. Yancey, Warmuth-Metz, Monika, Rutkowski, Stefan, Tabori, Uri, Lupien, Mathieu, Pietsch, Torsten, Hawkins, Cynthia E., Bouffet, Eric, Dirks, Peter B., Taylor, Michael D., Erdreich-Epstein, Anat, Arrowsmith, Cheryl H., De Carvalho, Daniel D., Rutka, James T., Jabado, Nada, Huang, Annie

Volltext

Identification of complex genomic rearrangements in cancers using CouGaR von Dzamba, Misko, Ramani, Arun K, Buczkowicz, Pawel, Jiang, Yue, Yu, Man, Hawkins, Cynthia, Brudno, Michael

Volltext

Structural variant in mitochondrial-associated gene (MRPL3) induces adult-onset neurodegeneration with memory impairment in the mouse von Cahill, Lindsay S, Cameron, Jessie M, Winterburn, Julie, Macos, Patrick, Hoggarth, Johnathan, Dzamba, Misko, Brudno, Michael, Nutter, Lauryl M J, Sproule, Thomas J, Burgess, Robert W, Henkelman, R Mark, Sled, John G

Volltext

Variant detection and the Autism sequencing project von Buske, Orion, Dzamba, Misko, Foong, Justin, Lau, Lynette, Fiume, Marc, Marshall, Christian, Walker, Susan, Prasad, Aparna, Brudno, Michael

Volltext

Open Materials 2024 (OMat24) Inorganic Materials Dataset and Models von Barroso-Luque, Luis, Shuaibi, Muhammed, Fu, Xiang, Wood, Brandon M, Dzamba, Misko, Gao, Meng, Rizvi, Ammar, Zitnick, C. Lawrence, Ulissi, Zachary W

Volltext bestellen

Hamiltonian Neural Networks von Greydanus, Sam, Dzamba, Misko, Yosinski, Jason

Volltext bestellen

Integrative Genomic Analyses of Atypical Teratoid Rhabdoid Tumours (ATRTs) von Torchia, Jonathon, Picard, Daniel, Kwang, Dong Anh, Dzamba, Misko, Ho, King Ching, Kim, Seoung-Ki, Louterneau, Louis, Lafay-Cousin, Lucie, Chan, Tiffany S.Y, Golbourn, Brian, Morrissy, Sorana, Birks, Diane, Faria, Claudia, Foreman, Nicholas, Fan, Xing, Murasko, Karen, Epstein, Anat, Fried, Iris, Toledano, Helen, Hwang, Eugene, Tihan, Tarik, Phillips, Joanna, Schuller, Uhlrich, Pietsch, Torsten, Pfister, Stefan, Taylor, Michael D, Rutka, James T, Judkins, Alex, Dirks, Peter, Bouffet, Eric, Brudno, Michael, Majewski, Jacek, Hawkins, Cynthia E, Jabado, Nada, Huang, Annie

Volltext

Hamiltonian Neural Networks von Greydanus, Sam, Misko Dzamba, Yosinski, Jason

Volltext

Additional file 5: Figure S4. of A novel strain of cynomolgus macaque cytomegalovirus: implications for host-virus co-evolution von Russell, Justen, Marsh, Angie, Willer, David, Ambagala, Aruna, Misko Dzamba, Chan, Jacqueline, Pilon, Richard, Fournier, Jocelyn, Brudno, Michael, Antony, Joseph, Sandstrom, Paul, Evans, Ben, MacDonald, Kelly

Volltext bestellen

Additional file 6: Figure S5. of A novel strain of cynomolgus macaque cytomegalovirus: implications for host-virus co-evolution von Russell, Justen, Marsh, Angie, Willer, David, Ambagala, Aruna, Misko Dzamba, Chan, Jacqueline, Pilon, Richard, Fournier, Jocelyn, Brudno, Michael, Antony, Joseph, Sandstrom, Paul, Evans, Ben, MacDonald, Kelly

Volltext bestellen

Additional file 11: Figure S10. of A novel strain of cynomolgus macaque cytomegalovirus: implications for host-virus co-evolution von Russell, Justen, Marsh, Angie, Willer, David, Ambagala, Aruna, Misko Dzamba, Chan, Jacqueline, Pilon, Richard, Fournier, Jocelyn, Brudno, Michael, Antony, Joseph, Sandstrom, Paul, Evans, Ben, MacDonald, Kelly

Volltext bestellen

Additional file 9: Figure S8. of A novel strain of cynomolgus macaque cytomegalovirus: implications for host-virus co-evolution von Russell, Justen, Marsh, Angie, Willer, David, Ambagala, Aruna, Misko Dzamba, Chan, Jacqueline, Pilon, Richard, Fournier, Jocelyn, Brudno, Michael, Antony, Joseph, Sandstrom, Paul, Evans, Ben, MacDonald, Kelly

Volltext bestellen

Additional file 3: Figure S2. of A novel strain of cynomolgus macaque cytomegalovirus: implications for host-virus co-evolution von Russell, Justen, Marsh, Angie, Willer, David, Ambagala, Aruna, Misko Dzamba, Chan, Jacqueline, Pilon, Richard, Fournier, Jocelyn, Brudno, Michael, Antony, Joseph, Sandstrom, Paul, Evans, Ben, MacDonald, Kelly

Volltext bestellen

Additional file 1: Figure S1. of A novel strain of cynomolgus macaque cytomegalovirus: implications for host-virus co-evolution von Russell, Justen, Marsh, Angie, Willer, David, Ambagala, Aruna, Misko Dzamba, Chan, Jacqueline, Pilon, Richard, Fournier, Jocelyn, Brudno, Michael, Antony, Joseph, Sandstrom, Paul, Evans, Ben, MacDonald, Kelly

Volltext bestellen

Additional file 8: Figure S7. of A novel strain of cynomolgus macaque cytomegalovirus: implications for host-virus co-evolution von Russell, Justen, Marsh, Angie, Willer, David, Ambagala, Aruna, Misko Dzamba, Chan, Jacqueline, Pilon, Richard, Fournier, Jocelyn, Brudno, Michael, Antony, Joseph, Sandstrom, Paul, Evans, Ben, MacDonald, Kelly

Volltext bestellen