Structural Similarity Enhances Interaction Propensity of Proteins von Lukatsky, D.B., Shakhnovich, B.E., Mintseris, J., Shakhnovich, E.I.

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Structure, Function, and Evolution of Transient and Obligate Protein-Protein Interactions von Mintseris, Julian, Weng, Zhiping, Thornton, Janet

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Protein-protein docking benchmark 2.0: An update von Mintseris, Julian, Wiehe, Kevin, Pierce, Brian, Anderson, Robert, Chen, Rong, Janin, Joël, Weng, Zhiping

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Atomic contact vectors in protein-protein recognition von Mintseris, Julian, Weng, Zhiping

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Are protein–protein interfaces more conserved in sequence than the rest of the protein surface? von Caffrey, Daniel R., Somaroo, Shyamal, Hughes, Jason D., Mintseris, Julian, Huang, Enoch S.

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A protein-protein docking benchmark von Chen, Rong, Mintseris, Julian, Janin, Joël, Weng, Zhiping

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A Protein Complex Network of Drosophila melanogaster von Guruharsha, K.G., Rual, Jean-François, Zhai, Bo, Mintseris, Julian, Vaidya, Pujita, Vaidya, Namita, Beekman, Chapman, Wong, Christina, Rhee, David Y., Cenaj, Odise, McKillip, Emily, Shah, Saumini, Stapleton, Mark, Wan, Kenneth H., Yu, Charles, Parsa, Bayan, Carlson, Joseph W., Chen, Xiao, Kapadia, Bhaveen, VijayRaghavan, K., Gygi, Steven P., Celniker, Susan E., Obar, Robert A., Artavanis-Tsakonas, Spyros

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Predictome: a database of putative functional links between proteins von Mellor, Joseph C, Yanai, Itai, Clodfelter, Karl H, Mintseris, Julian, DeLisi, Charles

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ZDOCK predictions for the CAPRI challenge von Chen, Rong, Tong, Weiwei, Mintseris, Julian, Li, Li, Weng, Zhiping

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Prokaryotic ubiquitin-like protein (Pup) proteome of Mycobacterium tuberculosis [corrected] von Festa, Richard A, McAllister, Fiona, Pearce, Michael J, Mintseris, Julian, Burns, Kristin E, Gygi, Steven P, Darwin, K Heran

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Structural similarity enhances interaction propensity of proteins von Lukatsky, D. B, Shakhnovich, B. E, Mintseris, J, Shakhnovich, E. I

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Structural similarity enhances interaction propensity of proteins von Lukatsky, D B, Shakhnovich, B E, Mintseris, J, Shakhnovich, E I

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Ubiquitin’s Pup(py)? von Hurtley, Stella M.

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The BioPlex Network: A Systematic Exploration of the Human Interactome von Huttlin, Edward L., Ting, Lily, Bruckner, Raphael J., Gebreab, Fana, Gygi, Melanie P., Szpyt, John, Tam, Stanley, Zarraga, Gabriela, Colby, Greg, Baltier, Kurt, Dong, Rui, Guarani, Virginia, Vaites, Laura Pontano, Ordureau, Alban, Rad, Ramin, Erickson, Brian K., Wühr, Martin, Chick, Joel, Zhai, Bo, Kolippakkam, Deepak, Mintseris, Julian, Obar, Robert A., Harris, Tim, Artavanis-Tsakonas, Spyros, Sowa, Mathew E., De Camilli, Pietro, Paulo, Joao A., Harper, J. Wade, Gygi, Steven P.

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High-density chemical cross-linking for modeling protein interactions von Mintseris, Julian, Gygi, Steven P.

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DPP9 sequesters the C terminus of NLRP1 to repress inflammasome activation von Hollingsworth, L. Robert, Sharif, Humayun, Griswold, Andrew R., Fontana, Pietro, Mintseris, Julian, Dagbay, Kevin B., Paulo, Joao A., Gygi, Steven P., Bachovchin, Daniel A., Wu, Hao

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Large-scale characterization of drug mechanism of action using proteome-wide thermal shift assays von Van Vranken, Jonathan G, Li, Jiaming, Mintseris, Julian, Wei, Ting-Yu, Sniezek, Catherine M, Gadzuk-Shea, Meagan, Gygi, Steven P, Schweppe, Devin K

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Structural insights into cytokine cleavage by inflammatory caspase-4 von Devant, Pascal, Dong, Ying, Mintseris, Julian, Ma, Weiyi, Gygi, Steven P., Wu, Hao, Kagan, Jonathan C.

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Protein-protein docking benchmark version 3.0 von Hwang, Howook, Pierce, Brian, Mintseris, Julian, Janin, Joël, Weng, Zhiping

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Improved Monoisotopic Mass Estimation for Deeper Proteome Coverage von Rad, Ramin, Li, Jiaming, Mintseris, Julian, O’Connell, Jeremy, Gygi, Steven P, Schweppe, Devin K

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