Recapitulation of the embryonic transcriptional program in holometabolous insect pupae von Ozerova, Alexandra M., Gelfand, Mikhail S.

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Genome-wide analysis of cell type-specific gene transcription during spore formation in Clostridium difficile von Saujet, Laure, Pereira, Fátima C, Serrano, Monica, Soutourina, Olga, Monot, Marc, Shelyakin, Pavel V, Gelfand, Mikhail S, Dupuy, Bruno, Henriques, Adriano O, Martin-Verstraete, Isabelle

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GntR Family of Bacterial Transcription Factors and Their DNA Binding Motifs: Structure, Positioning and Co-Evolution von Suvorova, Inna A, Korostelev, Yuri D, Gelfand, Mikhail S

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Evolution of Pan-Genomes of Escherichia coli, Shigella spp., and Salmonella enterica von Gordienko, Evgeny N, Kazanov, Marat D, Gelfand, Mikhail S

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Pangenomic Definition of Prokaryotic Species and the Phylogenetic Structure of Prochlorococcus spp von Moldovan, Mikhail A, Gelfand, Mikhail S

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Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization von Zhang, Yan, Rodionov, Dmitry A, Gelfand, Mikhail S, Gladyshev, Vadim N

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Nuclear lamina integrity is required for proper spatial organization of chromatin in Drosophila von Ulianov, Sergey V., Doronin, Semen A., Khrameeva, Ekaterina E., Kos, Pavel I., Luzhin, Artem V., Starikov, Sergei S., Galitsyna, Aleksandra A., Nenasheva, Valentina V., Ilyin, Artem A., Flyamer, Ilya M., Mikhaleva, Elena A., Logacheva, Mariya D., Gelfand, Mikhail S., Chertovich, Alexander V., Gavrilov, Alexey A., Razin, Sergey V., Shevelyov, Yuri Y.

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Evolution of the Exon-Intron Structure in Ciliate Genomes von Bondarenko, Vladyslav S, Gelfand, Mikhail S

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Comparative Analysis of the IclR-Family of Bacterial Transcription Factors and Their DNA-Binding Motifs: Structure, Positioning, Co-Evolution, Regulon Content von Suvorova, Inna A., Gelfand, Mikhail S.

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Order and stochasticity in the folding of individual Drosophila genomes von Ulianov, Sergey V., Zakharova, Vlada V., Galitsyna, Aleksandra A., Kos, Pavel I., Polovnikov, Kirill E., Flyamer, Ilya M., Mikhaleva, Elena A., Khrameeva, Ekaterina E., Germini, Diego, Logacheva, Mariya D., Gavrilov, Alexey A., Gorsky, Alexander S., Nechaev, Sergey K., Gelfand, Mikhail S., Vassetzky, Yegor S., Chertovich, Alexander V., Shevelyov, Yuri Y., Razin, Sergey V.

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Genome-Wide Transcription Start Site Mapping and Promoter Assignments to a Sigma Factor in the Human Enteropathogen Clostridioides difficile von Soutourina, Olga, Dubois, Thomas, Monot, Marc, Shelyakin, Pavel V., Saujet, Laure, Boudry, Pierre, Gelfand, Mikhail S., Dupuy, Bruno, Martin-Verstraete, Isabelle

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A hierarchy in clusters of cephalopod mRNA editing sites von Moldovan, Mikhail A., Chervontseva, Zoe S., Nogina, Daria S., Gelfand, Mikhail S.

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Genome rearrangements and selection in multi-chromosome bacteria Burkholderia spp von Bochkareva, Olga O, Moroz, Elena V, Davydov, Iakov I, Gelfand, Mikhail S

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De novo sequencing and characterization of floral transcriptome in two species of buckwheat (Fagopyrum) von Logacheva, Maria D, Kasianov, Artem S, Vinogradov, Dmitriy V, Samigullin, Tagir H, Gelfand, Mikhail S, Makeev, Vsevolod J, Penin, Aleksey A

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Nitrogen Fixation and Molecular Oxygen: Comparative Genomic Reconstruction of Transcription Regulation in Alphaproteobacteria von Tsoy, Olga V, Ravcheev, Dmitry A, Čuklina, Jelena, Gelfand, Mikhail S

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Comparative Genomic Analysis of the Regulation of Aromatic Metabolism in Betaproteobacteria von Suvorova, Inna A, Gelfand, Mikhail S

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Comparative genomic analysis of fungal TPP-riboswitches von Moldovan, Mikhail A., Petrova, Svetlana A., Gelfand, Mikhail S.

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Phylogeny and structural modeling of the transcription factor CsqR (YihW) from Escherichia coli von Rybina, Anna A., Glushak, Roman A., Bessonova, Tatiana A., Dakhnovets, Artemiy I., Rudenko, Alexander Yu, Ozhiganov, Ratislav M., Kaznadzey, Anna D., Tutukina, Maria N., Gelfand, Mikhail S.

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Chromosome-encoded IpaH ubiquitin ligases indicate non-human enteroinvasive Escherichia von Dranenko, Natalia O., Tutukina, Maria N., Gelfand, Mikhail S., Kondrashov, Fyodor A., Bochkareva, Olga O.

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Perspectives for the reconstruction of 3D chromatin conformation using single cell Hi-C data von Kos, Pavel I, Galitsyna, Aleksandra A, Ulianov, Sergey V, Gelfand, Mikhail S, Razin, Sergey V, Chertovich, Alexander V

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