Ten simple rules for getting involved in your scientific community von Michaut, Magali

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TANDEM: a two-stage approach to maximize interpretability of drug response models based on multiple molecular data types von Aben, Nanne, Vis, Daniel J, Michaut, Magali, Wessels, Lodewyk F A

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PSICQUIC and PSISCORE: accessing and scoring molecular interactions von Aranda, Bruno, Blankenburg, Hagen, Kerrien, Samuel, Brinkman, Fiona S L, Ceol, Arnaud, Chautard, Emilie, Dana, Jose M, De Las Rivas, Javier, Dumousseau, Marine, Galeota, Eugenia, Gaulton, Anna, Goll, Johannes, Hancock, Robert E W, Isserlin, Ruth, Jimenez, Rafael C, Kerssemakers, Jules, Khadake, Jyoti, Lynn, David J, Michaut, Magali, O'Kelly, Gavin, Ono, Keiichiro, Orchard, Sandra, Prieto, Carlos, Razick, Sabry, Rigina, Olga, Salwinski, Lukasz, Simonovic, Milan, Velankar, Sameer, Winter, Andrew, Wu, Guanming, Bader, Gary D, Cesareni, Gianni, Donaldson, Ian M, Eisenberg, David, Kleywegt, Gerard J, Overington, John, Ricard-Blum, Sylvie, Tyers, Mike, Albrecht, Mario, Hermjakob, Henning

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Genomic Determinants of Protein Abundance Variation in Colorectal Cancer Cells von Roumeliotis, Theodoros I., Williams, Steven P., Gonçalves, Emanuel, Alsinet, Clara, Del Castillo Velasco-Herrera, Martin, Aben, Nanne, Ghavidel, Fatemeh Zamanzad, Michaut, Magali, Schubert, Michael, Price, Stacey, Wright, James C., Yu, Lu, Yang, Mi, Dienstmann, Rodrigo, Guinney, Justin, Beltrao, Pedro, Brazma, Alvis, Pardo, Mercedes, Stegle, Oliver, Adams, David J., Wessels, Lodewyk, Saez-Rodriguez, Julio, McDermott, Ultan, Choudhary, Jyoti S.

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Assessment of PD-L1 expression across breast cancer molecular subtypes, in relation to mutation rate, BRCA1-like status, tumor-infiltrating immune cells and survival von Sobral-Leite, Marcelo, Van de Vijver, Koen, Michaut, Magali, van der Linden, Rianne, Hooijer, Gerrit K.J., Horlings, Hugo M., Severson, Tesa M., Mulligan, Anna Marie, Weerasooriya, Nayana, Sanders, Joyce, Glas, Annuska M, Wehkamp, Diederik, Mittempergher, Lorenza, Kersten, Kelly, Cimino-Mathews, Ashley, Peters, Dennis, Hooijberg, Erik, Broeks, Annegien, van de Vijver, Marc J., Bernards, Rene, Andrulis, Irene L., Kok, Marleen, de Visser, Karin E., Schmidt, Marjanka K.

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The BRCA1ness signature is associated significantly with response to PARP inhibitor treatment versus control in the I-SPY 2 randomized neoadjuvant setting von Severson, Tesa M, Wolf, Denise M, Yau, Christina, Peeters, Justine, Wehkam, Diederik, Schouten, Philip C, Chin, Suet-Feung, Majewski, Ian J, Michaut, Magali, Bosma, Astrid, Pereira, Bernard, Bismeijer, Tycho, Wessels, Lodewyk, Caldas, Carlos, Bernards, René, Simon, Iris M, Glas, Annuska M, Linn, Sabine, van 't Veer, Laura

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Mapping the Hsp90 genetic interaction network in Candida albicans reveals environmental contingency and rewired circuitry von Diezmann, Stephanie, Michaut, Magali, Shapiro, Rebecca S, Bader, Gary D, Cowen, Leah E

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Loss of functional BAP1 augments sensitivity to TRAIL in cancer cells von Kolluri, Krishna Kalyan, Alifrangis, Constantine, Kumar, Neelam, Ishii, Yuki, Price, Stacey, Michaut, Magali, Williams, Steven, Barthorpe, Syd, Lightfoot, Howard, Busacca, Sara, Sharkey, Annabel, Yuan, Zhenqiang, Sage, Elizabeth K, Vallath, Sabarinath, Le Quesne, John, Tice, David A, Alrifai, Doraid, von Karstedt, Sylvia, Montinaro, Antonella, Guppy, Naomi, Waller, David A, Nakas, Apostolos, Good, Robert, Holmes, Alan, Walczak, Henning, Fennell, Dean A, Garnett, Mathew, Iorio, Francesco, Wessels, Lodewyk, McDermott, Ultan, Janes, Samuel M

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Next generation sequencing of triple negative breast cancer to find predictors for chemotherapy response von Lips, Esther H, Michaut, Magali, Hoogstraat, Marlous, Mulder, Lennart, Besselink, Nicolle J M, Koudijs, Marco J, Cuppen, Edwin, Voest, Emile E, Bernards, Rene, Nederlof, Petra M, Wesseling, Jelle, Rodenhuis, Sjoerd, Wessels, Lodewyk F A

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Explain bioinformatics to your grandmother von Bernard, Virginie, Michaut, Magali

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Distinct types of disorder in the human proteome: functional implications for alternative splicing von Colak, Recep, Kim, TaeHyung, Michaut, Magali, Sun, Mark, Irimia, Manuel, Bellay, Jeremy, Myers, Chad L, Blencowe, Benjamin J, Kim, Philip M

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Cadmium triggers an integrated reprogramming of the metabolism of Synechocystis PCC6803, under the control of the Slr1738 regulator von Houot, Laetitia, Floutier, Martin, Marteyn, Benoit, Michaut, Magali, Picciocchi, Antoine, Legrain, Pierre, Aude, Jean-Christophe, Cassier-Chauvat, Corinne, Chauvat, Franck

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The regional student group program of the ISCB student council: stories from the road von Macintyre, Geoff, Michaut, Magali, Abeel, Thomas

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Genetic interaction maps in Escherichia coli reveal functional crosstalk among cell envelope biogenesis pathways von Babu, Mohan, Díaz-Mejía, J Javier, Vlasblom, James, Gagarinova, Alla, Phanse, Sadhna, Graham, Chris, Yousif, Fouad, Ding, Huiming, Xiong, Xuejian, Nazarians-Armavil, Anaies, Alamgir, Md, Ali, Mehrab, Pogoutse, Oxana, Pe'er, Asaf, Arnold, Roland, Michaut, Magali, Parkinson, John, Golshani, Ashkan, Whitfield, Chris, Wodak, Shoshana J, Moreno-Hagelsieb, Gabriel, Greenblatt, Jack F, Emili, Andrew

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ERG Controls B Cell Development by Promoting Igh V-to-DJ Recombination von Søndergaard, Elisabeth, Rauch, Alexander, Michaut, Magali, Rapin, Nicolas, Rehn, Matilda, Wilhelmson, Anna S., Camponeschi, Alessandro, Hasemann, Marie S., Bagger, Frederik O., Jendholm, Johan, Knudsen, Kasper J., Mandrup, Susanne, Mårtensson, Inga-Lill, Porse, Bo T.

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Kinome capture sequencing of high-grade serous ovarian carcinoma reveals novel mutations in the JAK3 gene von Mittempergher, Lorenza, Piskorz, Anna M, Bosma, Astrid J, Michaut, Magali, Wisman, G Bea A, Kluin, Roelof J C, Nieuwland, Marja, Brugman, Wim, van der Ven, Kevin J W, Marass, Francesco, Morris, James, Rosenfeld, Nitzan, Jimenez-Linan, Mercedes, de Jong, Steven, van der Zee, Ate G J, Brenton, James D, Bernards, René

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The ISCB Student Council Internship Program: Expanding computational biology capacity worldwide von Anupama, Jigisha, Francescatto, Margherita, Rahman, Farzana, Fatima, Nazeefa, DeBlasio, Dan, Shanmugam, Avinash Kumar, Satagopam, Venkata, Santos, Alberto, Kolekar, Pandurang, Michaut, Magali, Guney, Emre

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Ten simple rules for starting a regional student group von Shanmugam, Avinash Kumar, Macintyre, Geoff, Michaut, Magali, Abeel, Thomas

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Putting genetic interactions in context through a global modular decomposition von Bellay, Jeremy, Atluri, Gowtham, Sing, Tina L, Toufighi, Kiana, Costanzo, Michael, Ribeiro, Philippe Souza Moraes, Pandey, Gaurav, Baller, Joshua, VanderSluis, Benjamin, Michaut, Magali, Han, Sangjo, Kim, Philip, Brown, Grant W, Andrews, Brenda J, Boone, Charles, Kumar, Vipin, Myers, Chad L

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Multiple genetic interaction experiments provide complementary information useful for gene function prediction von Michaut, Magali, Bader, Gary D

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