Gamma Interferon Release Assays for Detection of Mycobacterium tuberculosis Infection von PAI, Madhukar, DENKINGER, Claudia M, BANAEI, Niaz, KIK, Sandra V, RANGAKA, Molebogeng X, ZWERLING, Alice, OXLADE, Olivia, METCALFE, John Z, CATTAMANCHI, Adithya, DOWDY, David W, DHEDA, Keertan

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primerJinn: a tool for rationally designing multiplex PCR primer sets for amplicon sequencing and performing in silico PCR von Limberis, Jason D, Metcalfe, John Z

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A simple, single-tube overlapping amplicon-targeted Illumina sequencing assay von Limberis, Jason D, Nalyvayko, Alina, Ernst, Joel D, Metcalfe, John Z

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stilPCR increases the effective sequencing length of Illumina targeted next-generation sequencing von Limberis, Jason D, Nagel, Roland J, Chakravorty, Soumitesh, Block, Dena, Dewell, Scott, Nalyvayko, Alina, Howard, Zach, Theron, Grant, Venter, Rouxjeane, Metcalfe, John Z

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Health care seeking patterns of rifampicin-resistant tuberculosis patients in Harare, Zimbabwe: A prospective cohort study von Tadokera, Rebecca, Huo, Stella, Theron, Grant, Timire, Collins, Manyau-Makumbirofa, Salome, Metcalfe, John Z

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selSeq: A method for the enrichment of non-polyadenylated RNAs including enhancer and long non-coding RNAs for sequencing von Limberis, Jason D, Nalyvayko, Alina, Ernst, Joel D, Metcalfe, John Z

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Interferon-Gamma Release Assays for the Diagnosis of Latent Tuberculosis Infection in HIV-Infected Individuals: A Systematic Review and Meta-Analysis von Cattamanchi, Adithya, Smith, Rachel, Steingart, Karen R, Metcalfe, John Z, Date, Anand, Coleman, Courtney, Marston, Barbara J, Huang, Laurence, Hopewell, Philip C, Pai, Madhukar

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Turbolysis: A low-cost, small footprint alternative to commercial bead beaters for cell lysis von Limberis, Jason D., Metcalfe, John Z.

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Genetic variants and their association with phenotypic resistance to bedaquiline in Mycobacterium tuberculosis: a systematic review and individual isolate data analysis von Ismail, Nabila, Rivière, Emmanuel, Limberis, Jason, Huo, Stella, Metcalfe, John Z, Warren, Rob M, Van Rie, Annelies

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Moving Beyond Directly Observed Therapy for Tuberculosis von Metcalfe, John Z, O'Donnell, Max R, Bangsberg, David R

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Prevalence of drug-resistant tuberculosis in Zimbabwe: A health facility-based cross-sectional survey von Timire, Collins, Metcalfe, John Z., Chirenda, Joconiah, Scholten, Jerod N., Manyame-Murwira, Barbara, Ngwenya, Mkhokheli, Matambo, Ronnie, Charambira, Kelvin, Mutunzi, Herbert, Kalisvaart, Nico, Sandy, Charles

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Rapid molecular testing for TB to guide respiratory isolation in the U.S.: a cost-benefit analysis von Millman, Alexander J, Dowdy, David W, Miller, Cecily R, Brownell, Robert, Metcalfe, John Z, Cattamanchi, Adithya, Davis, J Lucian

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Distinct lung microbiota associate with HIV-associated chronic lung disease in children von Bhadriraju, Sudha, Fadrosh, Douglas W., Shenoy, Meera K., Lin, Din L., Lynch, Kole V., McCauley, Kathryn, Ferrand, Rashida A., Majonga, Edith D., McHugh, Grace, Huang, Laurence, Lynch, Susan V., Metcalfe, John Z.

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Clinical Characteristics and Treatment Outcomes of Patients with Isoniazid-Monoresistant Tuberculosis von Cattamanchi, Adithya, Dantes, Raymund B., Metcalfe, John Z., Jarlsberg, Leah G., Grinsdale, Jennifer, Kawamura, L. Masae, Osmond, Dennis, Hopewell, Philip C., Nahid, Payam

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Microscopic-observation drug-susceptibility assay for the diagnosis of drug-resistant tuberculosis in Harare, Zimbabwe von Makamure, Beauty, Mhaka, Jesca, Makumbirofa, Salome, Mutetwa, Reggie, Mupfumi, Lucy, Mason, Peter, Metcalfe, John Z

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Clinical and radiographic factors do not accurately diagnose smear-negative tuberculosis in HIV-infected inpatients in Uganda: a cross-sectional study von Davis, J Lucian, Worodria, William, Kisembo, Harriet, Metcalfe, John Z, Cattamanchi, Adithya, Kawooya, Michael, Kyeyune, Rachel, den Boon, Saskia, Powell, Krista, Okello, Richard, Yoo, Samuel, Huang, Laurence

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Tuberculosis progression rates in U.S. Immigrants following screening with interferon-gamma release assays von Blount, Robert J, Tran, Minh-Chi, Everett, Charles K, Cattamanchi, Adithya, Metcalfe, John Z, Connor, Denise, Miller, Cecily R, Grinsdale, Jennifer, Higashi, Julie, Nahid, Payam

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Drug-resistant tuberculosis in high-risk groups, Zimbabwe von Metcalfe, John Z, Makumbirofa, Salome, Makamure, Beauty, Sandy, Charles, Bara, Wilbert, Mungofa, Stanley, Hopewell, Philip C, Mason, Peter

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Tuberculosis and HIV co-infection, California, USA, 1993–2008 von Metcalfe, John Z, Porco, Travis C, Westenhouse, Janice, Damesyn, Mark, Facer, Matt, Hill, Julia, Xia, Qiang, Watt, James P, Hopewell, Philip C, Flood, Jennifer

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Interferon-γ Release Assays for Active Pulmonary Tuberculosis Diagnosis in Adults in Low- and Middle-Income Countries: Systematic Review and Meta-analysis von Metcalfe, John Z., Everett, Charles K., Steingart, Karen R., Cattamanchi, Adithya, Huang, Laurence, Hopewell, Philip C., Pai, Madhukar

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