Clonality inference in multiple tumor samples using phylogeny von Malikic, Salem, McPherson, Andrew W, Donmez, Nilgun, Sahinalp, Cenk S

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Perspectives of people experiencing homelessness with recent non-fatal street drug overdose on the Pharmacist and Homeless Outreach Engagement and Non-medical Independent prescribi... von Farmer, Natalia, McPherson, Andrew, Thomson, Jim, Lowrie, Richard

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Probabilistic cell-type assignment of single-cell RNA-seq for tumor microenvironment profiling von Zhang, Allen W., O’Flanagan, Ciara, Chavez, Elizabeth A., Lim, Jamie L. P., Ceglia, Nicholas, McPherson, Andrew, Wiens, Matt, Walters, Pascale, Chan, Tim, Hewitson, Brittany, Lai, Daniel, Mottok, Anja, Sarkozy, Clementine, Chong, Lauren, Aoki, Tomohiro, Wang, Xuehai, Weng, Andrew P, McAlpine, Jessica N., Aparicio, Samuel, Steidl, Christian, Campbell, Kieran R., Shah, Sohrab P.

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Synthesis of 5'-GalNAc-Conjugated Oligonucleotides: A Comparison of Solid and Solution-Phase Conjugation Strategies von Cedillo, Isaiah, Chreng, Dana, Engle, Elyse, Chen, Lijian, McPherson, Andrew K, Rodriguez, Andrew A

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Genomic rearrangements involving programmed death ligands are recurrent in primary mediastinal large B-cell lymphoma von Twa, David D.W., Chan, Fong Chun, Ben-Neriah, Susana, Woolcock, Bruce W., Mottok, Anja, Tan, King L., Slack, Graham W., Gunawardana, Jay, Lim, Raymond S., McPherson, Andrew W., Kridel, Robert, Telenius, Adele, Scott, David W., Savage, Kerry J., Shah, Sohrab P., Gascoyne, Randy D., Steidl, Christian

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Dissociation of solid tumor tissues with cold active protease for single-cell RNA-seq minimizes conserved collagenase-associated stress responses von O'Flanagan, Ciara H, Campbell, Kieran R, Zhang, Allen W, Kabeer, Farhia, Lim, Jamie L P, Biele, Justina, Eirew, Peter, Lai, Daniel, McPherson, Andrew, Kong, Esther, Bates, Cherie, Borkowski, Kelly, Wiens, Matt, Hewitson, Brittany, Hopkins, James, Pham, Jenifer, Ceglia, Nicholas, Moore, Richard, Mungall, Andrew J, McAlpine, Jessica N, Shah, Sohrab P, Aparicio, Samuel

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Divergent modes of clonal spread and intraperitoneal mixing in high-grade serous ovarian cancer von McPherson, Andrew, Roth, Andrew, Laks, Emma, Masud, Tehmina, Bashashati, Ali, Zhang, Allen W, Ha, Gavin, Biele, Justina, Yap, Damian, Wan, Adrian, Prentice, Leah M, Khattra, Jaswinder, Smith, Maia A, Nielsen, Cydney B, Mullaly, Sarah C, Kalloger, Steve, Karnezis, Anthony, Shumansky, Karey, Siu, Celia, Rosner, Jamie, Chan, Hector Li, Ho, Julie, Melnyk, Nataliya, Senz, Janine, Yang, Winnie, Moore, Richard, Mungall, Andrew J, Marra, Marco A, Bouchard-Côté, Alexandre, Gilks, C Blake, Huntsman, David G, McAlpine, Jessica N, Aparicio, Samuel, Shah, Sohrab P

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Histological Transformation and Progression in Follicular Lymphoma: A Clonal Evolution Study von Kridel, Robert, Chan, Fong Chun, Mottok, Anja, Boyle, Merrill, Farinha, Pedro, Tan, King, Meissner, Barbara, Bashashati, Ali, McPherson, Andrew, Roth, Andrew, Shumansky, Karey, Yap, Damian, Ben-Neriah, Susana, Rosner, Jamie, Smith, Maia A, Nielsen, Cydney, Giné, Eva, Telenius, Adele, Ennishi, Daisuke, Mungall, Andrew, Moore, Richard, Morin, Ryan D, Johnson, Nathalie A, Sehn, Laurie H, Tousseyn, Thomas, Dogan, Ahmet, Connors, Joseph M, Scott, David W, Steidl, Christian, Marra, Marco A, Gascoyne, Randy D, Shah, Sohrab P

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Audio Effects: Theory, Implementation and Application von Reiss, Joshua D, McPherson, Andrew

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Clonal genotype and population structure inference from single-cell tumor sequencing von Roth, Andrew, McPherson, Andrew, Laks, Emma, Biele, Justina, Yap, Damian, Wan, Adrian, Smith, Maia A, Nielsen, Cydney B, McAlpine, Jessica N, Aparicio, Samuel, Bouchard-Côté, Alexandre, Shah, Sohrab P

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Allele-specific transcriptional effects of subclonal copy number alterations enable genotype-phenotype mapping in cancer cells von Shi, Hongyu, Williams, Marc J., Satas, Gryte, Weiner, Adam C., McPherson, Andrew, Shah, Sohrab P.

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An Improved Process for the Manufacture of 5′‑O‑(4,4′-Dimethoxytrityl)‑N 2‑isobutyryl-2′‑O‑(2-methoxyethyl)guanosine von McPherson, Andrew K, Capaldi, Daniel, Chen, Lijian, Olsen, Philip

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clonealign: statistical integration of independent single-cell RNA and DNA sequencing data from human cancers von Campbell, Kieran R, Steif, Adi, Laks, Emma, Zahn, Hans, Lai, Daniel, McPherson, Andrew, Farahani, Hossein, Kabeer, Farhia, O'Flanagan, Ciara, Biele, Justina, Brimhall, Jazmine, Wang, Beixi, Walters, Pascale, Bouchard-Côté, Alexandre, Aparicio, Samuel, Shah, Sohrab P

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ARID1A Mutations in Endometriosis-Associated Ovarian Carcinomas von Wiegand, Kimberly C, Shah, Sohrab P, Al-Agha, Osama M, Zhao, Yongjun, Tse, Kane, Zeng, Thomas, Senz, Janine, McConechy, Melissa K, Anglesio, Michael S, Kalloger, Steve E, Yang, Winnie, Heravi-Moussavi, Alireza, Giuliany, Ryan, Chow, Christine, Fee, John, Zayed, Abdalnasser, Prentice, Leah, Melnyk, Nataliya, Turashvili, Gulisa, Delaney, Allen D, Madore, Jason, Yip, Stephen, McPherson, Andrew W, Ha, Gavin, Bell, Lynda, Fereday, Sian, Tam, Angela, Galletta, Laura, Tonin, Patricia N, Provencher, Diane, Miller, Dianne, Jones, Steven J.M, Moore, Richard A, Morin, Gregg B, Oloumi, Arusha, Boyd, Niki, Aparicio, Samuel A, Shih, Ie-Ming, Mes-Masson, Anne-Marie, Bowtell, David D, Hirst, Martin, Gilks, Blake, Marra, Marco A, Huntsman, David G

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The microbiome of the footrot lesion in Merino sheep is characterized by a persistent bacterial dysbiosis von McPherson, Andrew S., Dhungyel, Om P., Whittington, Richard J.

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Detection and Serogrouping of Dichelobacter nodosus Infection by Use of Direct PCR from Lesion Swabs To Support Outbreak-Specific Vaccination for Virulent Footrot in Sheep von McPherson, Andrew S, Dhungyel, Om P, Whittington, Richard J

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Conversion of adenine to 5-amino-4-pyrimidinylimidazole caused by acetyl capping during solid phase oligonucleotide synthesis von Rodriguez, Andrew A., Cedillo, Isaiah, McPherson, Andrew K.

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Inferring replication timing and proliferation dynamics from single-cell DNA sequencing data von Weiner, Adam C., Williams, Marc J., Shi, Hongyu, Vázquez-García, Ignacio, Salehi, Sohrab, Rusk, Nicole, Aparicio, Samuel, Shah, Sohrab P., McPherson, Andrew

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MHC class II transactivator CIITA is a recurrent gene fusion partner in lymphoid cancers von Steidl, Christian, Shah, Sohrab P., Woolcock, Bruce W., Rui, Lixin, Kawahara, Masahiro, Farinha, Pedro, Johnson, Nathalie A., Zhao, Yongjun, Telenius, Adele, Neriah, Susana Ben, McPherson, Andrew, Meissner, Barbara, Okoye, Ujunwa C., Diepstra, Arjan, van den Berg, Anke, Sun, Mark, Leung, Gillian, Jones, Steven J., Connors, Joseph M., Huntsman, David G., Savage, Kerry J., Rimsza, Lisa M., Horsman, Douglas E., Staudt, Louis M., Steidl, Ulrich, Marra, Marco A., Gascoyne, Randy D.

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Evaluation of Genotypic and Phenotypic Protease Virulence Tests for Dichelobacter nodosus Infection in Sheep von McPherson, Andrew S, Dhungyel, Om P, Whittington, Richard J

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