Computational identification and functional predictions of long noncoding RNA in Zea mays von Boerner, Susan, McGinnis, Karen M

Volltext

Spreading of heterochromatin is limited to specific families of maize retrotransposons von Eichten, Steven R, Ellis, Nathanael A, Makarevitch, Irina, Yeh, Cheng-Ting, Gent, Jonathan I, Guo, Lin, McGinnis, Karen M, Zhang, Xiaoyu, Schnable, Patrick S, Vaughn, Matthew W, Dawe, R Kelly, Springer, Nathan M

Volltext

Genome-wide analyses of alternative splicing in plants: opportunities and challenges von Barbazuk, W Brad, Fu, Yan, McGinnis, Karen M

Volltext

Construction and Optimization of a Large Gene Coexpression Network in Maize Using RNA-Seq Data von Huang, Ji, Vendramin, Stefania, Shi, Lizhen, McGinnis, Karen M.

Volltext

RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome von Li, Qing, Gent, Jonathan I., Zynda, Greg, Song, Jawon, Makarevitch, Irina, Hirsch, Cory D., Hirsch, Candice N., Dawe, R. Kelly, Madzima, Thelma F., McGinnis, Karen M., Lisch, Damon, Schmitz, Robert J., Vaughn, Matthew W., Springer, Nathan M.

Volltext

Computational Analysis of lncRNA from cDNA Sequences von Boerner, Susan, McGinnis, Karen M.

Volltext

Distinct tissue-specific transcriptional regulation revealed by gene regulatory networks in maize von Huang, Ji, Zheng, Juefei, Yuan, Hui, McGinnis, Karen

Volltext

Accessible DNA and relative depletion of H3K9me2 at maize loci undergoing RNA-directed DNA methylation von Gent, Jonathan I, Madzima, Thelma F, Bader, Rechien, Kent, Matthew R, Zhang, Xiaoyu, Stam, Maike, McGinnis, Karen M, Dawe, R Kelly

Volltext

Genetic Perturbation of the Maize Methylome von Li, Qing, Eichten, Steven R., Hermanson, Peter J., Zaunbrecher, Virginia M., Song, Jawon, Wendt, Jennifer, Rosenbaum, Heidi, Madzima, Thelma F., Sloan, Amy E., Huang, Ji, Burgess, Daniel L., Richmond, Todd A., McGinnis, Karen M., Meeley, Robert B., Danilevskaya, Olga N., Vaughn, Matthew W., Kaeppler, Shawn M., Jeddeloh, Jeffrey A., Springer, Nathan M.

Volltext

Using iRNA-seq analysis to predict gene expression regulatory level and activity in Zea mays tissues von Schulte, Lauren M, Koirtyohann, Kathryn M, McGinnis, Karen M

Volltext

Epigenetic Regulation of ABA-Induced Transcriptional Responses in Maize von Vendramin, Stefania, Huang, Ji, Crisp, Peter A., Madzima, Thelma F., McGinnis, Karen M.

Volltext

Differential Nuclease Sensitivity Profiling of Chromatin Reveals Biochemical Footprints Coupled to Gene Expression and Functional DNA Elements in Maize von Vera, Daniel L., Madzima, Thelma F., Labonne, Jonathan D., Alam, Mohammad P., Hoffman, Gregg G., Girimurugan, S.B., Zhang, Jinfeng, McGinnis, Karen M., Dennis, Jonathan H., Bass, Hank W.

Volltext

Diverse gene-silencing mechanisms with distinct requirements for RNA polymerase subunits in Zea mays von Sloan, Amy E, Sidorenko, Lyudmila, McGinnis, Karen M

Volltext

Comparing DNA replication programs reveals large timing shifts at centromeres of endocycling cells in maize roots von Wear, Emily E., Song, Jawon, Zynda, Gregory J., Mickelson-Young, Leigh, LeBlanc, Chantal, Lee, Tae-Jin, Deppong, David O., Allen, George C., Martienssen, Robert A., Vaughn, Matthew W., Hanley-Bowdoin, Linda, Thompson, William F.

Volltext

Direct and Indirect Transcriptional Effects of Abiotic Stress in Zea mays Plants Defective in RNA-Directed DNA Methylation von Madzima, Thelma F., Vendramin, Stefania, Lynn, Jason S., Lemert, Phebe, Lu, Katherine C., McGinnis, Karen M.

Volltext

Computational Analysis of LncRNA from cDNA Sequences von Boerner, Susan, McGinnis, Karen M.

Volltext

Paramutation in evolution, population genetics and breeding von Springer, Nathan M., McGinnis, Karen M.

Volltext

The CLASI (Cutaneous Lupus Erythematosus Disease Area and Severity Index): An Outcome Instrument for Cutaneous Lupus Erythematosus von Albrecht, Joerg, Taylor, Lynne, Berlin, Jesse A., Dulay, Samuel, Ang, Gina, Fakharzadeh, Steven, Kantor, Jonathan, Kim, Ellen, Militello, Giuseppe, McGinnis, Karen, Richardson, Stephen, Treat, James, Vittorio, Carmela, Van Voorhees, Abby, Werth, Victoria P.

Volltext

RNAi for functional genomics in plants von McGinnis, Karen M

Volltext

The Arabidopsis SLEEPY1 Gene Encodes a Putative F-Box Subunit of an SCF E3 Ubiquitin Ligase von McGinnis, Karen M., Thomas, Stephen G., Soule, Jonathan D., Strader, Lucia C., Zale, Janice M., Sun, Tai-ping, Steber, Camille M.

Volltext