Phylogenomic Reconstruction of the Oomycete Phylogeny Derived from 37 Genomes von McCarthy, Charley G P, Fitzpatrick, David A

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Genome analysis of the yeast Diutina catenulata, a member of the Debaryomycetaceae/Metschnikowiaceae (CTG-Ser) clade von O'Brien, Caoimhe E, McCarthy, Charley G P, Walshe, Annie E, Shaw, Dennis R, Sumski, Deirdre A, Krassowski, Tadeusz, Fitzpatrick, David A, Butler, Geraldine

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Evolutionary, structural and functional analysis of the caleosin/peroxygenase gene family in the Fungi von Rahman, Farzana, Hassan, Mehedi, Hanano, Abdulsamie, Fitzpatrick, David A, McCarthy, Charley G P, Murphy, Denis J

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Systematic Search for Evidence of Interdomain Horizontal Gene Transfer from Prokaryotes to Oomycete Lineages von McCarthy, Charley G P, Fitzpatrick, David A

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Expanded phylogeny of extremely halophilic archaea shows multiple independent adaptations to hypersaline environments von Baker, Brittany A., Gutiérrez-Preciado, Ana, Rodríguez del Río, Álvaro, McCarthy, Charley G. P., López-García, Purificación, Huerta-Cepas, Jaime, Susko, Edward, Roger, Andrew J., Eme, Laura, Moreira, David

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Whole Genome Sequence of the Commercially Relevant Mushroom Strain Agaricus bisporus var. bisporus ARP23 von O'Connor, Eoin, McGowan, Jamie, McCarthy, Charley G P, Amini, Aniça, Grogan, Helen, Fitzpatrick, David A

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Improving Orthologous Signal and Model Fit in Datasets Addressing the Root of the Animal Phylogeny von McCarthy, Charley G P, Mulhair, Peter O, Siu-Ting, Karen, Creevey, Christopher J, O’Connell, Mary J

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Filtering artifactual signal increases support for Xenacoelomorpha and Ambulacraria sister relationship in the animal tree of life von Mulhair, Peter O, McCarthy, Charley G P, Siu-Ting, Karen, Creevey, Christopher J, O'Connell, Mary J

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Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching von Hopes, Tayah, Norris, Karl, Agapiou, Michaela, McCarthy, Charley G P, Lewis, Philip A, O’Connell, Mary J, Fontana, Juan, Aspden, Julie L

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Pan-genome analyses of model fungal species von McCarthy, Charley G P, Fitzpatrick, David A

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Antibiotic resistomes of healthy pig faecal metagenomes von Joyce, Aoife, McCarthy, Charley G P, Murphy, Sinead, Walsh, Fiona

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Pangloss: A Tool for Pan-Genome Analysis of Microbial Eukaryotes von McCarthy, Charley G P, Fitzpatrick, David A

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Genome analysis of the yeast Diutina catenulata, a member of the Debaryomycetaceae/Metschnikowiaceae von O'Brien, Caoimhe E, McCarthy, Charley G. P, Walshe, Annie E, Shaw, Dennis R, Sumski, Deirdre A, Krassowski, Tadeusz, Fitzpatrick, David A, Butler, Geraldine

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Supplemental Material for O'Connor et al., 2019 von O’Connor, Eoin, McGowan, Jamie, McCarthy, Charley G. P., Aniça Amini, Grogan, Helen, Fitzpatrick, David

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