Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks von Bin Jang, Ho, Bolduc, Benjamin, Zablocki, Olivier, Kuhn, Jens H., Roux, Simon, Adriaenssens, Evelien M., Brister, J. Rodney, Kropinski, Andrew M, Krupovic, Mart, Lavigne, Rob, Turner, Dann, Sullivan, Matthew B.

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The Gut Virome Database Reveals Age-Dependent Patterns of Virome Diversity in the Human Gut von Gregory, Ann C., Zablocki, Olivier, Zayed, Ahmed A., Howell, Allison, Bolduc, Benjamin, Sullivan, Matthew B.

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The Pacific Ocean virome (POV): a marine viral metagenomic dataset and associated protein clusters for quantitative viral ecology von Hurwitz, Bonnie L, Sullivan, Matthew B

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Rising to the challenge: accelerated pace of discovery transforms marine virology von Brum, Jennifer R., Sullivan, Matthew B.

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Tara Oceans: towards global ocean ecosystems biology von Sunagawa, Shinichi, Acinas, Silvia G., Bork, Peer, Bowler, Chris, Eveillard, Damien, Gorsky, Gabriel, Guidi, Lionel, Iudicone, Daniele, Karsenti, Eric, Lombard, Fabien, Ogata, Hiroyuki, Pesant, Stephane, Sullivan, Matthew B., Wincker, Patrick, de Vargas, Colomban

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Lysogeny in nature: mechanisms, impact and ecology of temperate phages von Howard-Varona, Cristina, Hargreaves, Katherine R, Abedon, Stephen T, Sullivan, Matthew B

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VirSorter: mining viral signal from microbial genomic data von Roux, Simon, Enault, Francois, Hurwitz, Bonnie L, Sullivan, Matthew B

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Viral dark matter and virus-host interactions resolved from publicly available microbial genomes von Roux, Simon, Hallam, Steven J, Woyke, Tanja, Sullivan, Matthew B

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Viromes, not gene markers, for studying double-stranded DNA virus communities von Sullivan, Matthew B

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Marine DNA Viral Macro- and Microdiversity from Pole to Pole von Gregory, Ann C., Zayed, Ahmed A., Conceição-Neto, Nádia, Temperton, Ben, Bolduc, Ben, Alberti, Adriana, Ardyna, Mathieu, Arkhipova, Ksenia, Carmichael, Margaux, Cruaud, Corinne, Dimier, Céline, Domínguez-Huerta, Guillermo, Ferland, Joannie, Kandels, Stefanie, Liu, Yunxiao, Marec, Claudie, Pesant, Stéphane, Picheral, Marc, Pisarev, Sergey, Poulain, Julie, Tremblay, Jean-Éric, Vik, Dean, Acinas, Silvia G., Babin, Marcel, Bork, Peer, Boss, Emmanuel, Bowler, Chris, Cochrane, Guy, de Vargas, Colomban, Follows, Michael, Gorsky, Gabriel, Grimsley, Nigel, Guidi, Lionel, Hingamp, Pascal, Iudicone, Daniele, Jaillon, Olivier, Kandels-Lewis, Stefanie, Karp-Boss, Lee, Karsenti, Eric, Not, Fabrice, Ogata, Hiroyuki, Pesant, Stéphane, Poulton, Nicole, Raes, Jeroen, Sardet, Christian, Speich, Sabrina, Stemmann, Lars, Sullivan, Matthew B., Sunagawa, Shinichi, Wincker, Patrick, Babin, Marcel, Bowler, Chris, Culley, Alexander I., de Vargas, Colomban, Dutilh, Bas E., Iudicone, Daniele, Karp-Boss, Lee, Roux, Simon, Sunagawa, Shinichi, Wincker, Patrick, Sullivan, Matthew B.

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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses von Guo, Jiarong, Bolduc, Ben, Zayed, Ahmed A., Varsani, Arvind, Dominguez-Huerta, Guillermo, Delmont, Tom O., Pratama, Akbar Adjie, Gazitua, M. Consuelo, Vik, Dean, Sullivan, Matthew B., Roux, Simon

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Numerous cultivated and uncultivated viruses encode ribosomal proteins von Mizuno, Carolina M., Guyomar, Charlotte, Roux, Simon, Lavigne, Régis, Rodriguez-Valera, Francisco, Sullivan, Matthew B., Gillet, Reynald, Forterre, Patrick, Krupovic, Mart

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DRAM for distilling microbial metabolism to automate the curation of microbiome function von Shaffer, Michael, Borton, Mikayla A., McGivern, Bridget B., Zayed, Ahmed A., La Rosa, Sabina Leanti, Solden, Lindsey M., Liu, Pengfei, Narrowe, Adrienne B., Rodriguez-Ramos, Josue, Bolduc, Benjamin, Gazitua, M. Consuelo, Daly, Rebecca A., Smith, Garrett J., Vik, Dean R., Pope, Phil B., Sullivan, Matthew B., Roux, Simon, Wrighton, Kelly C.

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Biosynthetic potential of the global ocean microbiome von Paoli, Lucas, Ruscheweyh, Hans-Joachim, Forneris, Clarissa C., Hubrich, Florian, Kautsar, Satria, Bhushan, Agneya, Lotti, Alessandro, Clayssen, Quentin, Salazar, Guillem, Milanese, Alessio, Carlström, Charlotte I., Papadopoulou, Chrysa, Gehrig, Daniel, Karasikov, Mikhail, Mustafa, Harun, Larralde, Martin, Carroll, Laura M., Sánchez, Pablo, Zayed, Ahmed A., Cronin, Dylan R., Acinas, Silvia G., Bork, Peer, Bowler, Chris, Delmont, Tom O., Gasol, Josep M., Gossert, Alvar D., Kahles, André, Sullivan, Matthew B., Wincker, Patrick, Zeller, Georg, Robinson, Serina L., Piel, Jörn, Sunagawa, Shinichi

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Seasonal time bombs: dominant temperate viruses affect Southern Ocean microbial dynamics von Brum, Jennifer R, Hurwitz, Bonnie L, Schofield, Oscar, Ducklow, Hugh W, Sullivan, Matthew B

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Revisiting the rules of life for viruses of microorganisms von Correa, Adrienne M. S., Howard-Varona, Cristina, Coy, Samantha R., Buchan, Alison, Sullivan, Matthew B., Weitz, Joshua S.

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2015 American College of Rheumatology Guideline for the Treatment of Rheumatoid Arthritis von Singh, Jasvinder A., Saag, Kenneth G., Bridges, S. Louis, Akl, Elie A., Bannuru, Raveendhara R., Sullivan, Matthew C., Vaysbrot, Elizaveta, McNaughton, Christine, Osani, Mikala, Shmerling, Robert H., Curtis, Jeffrey R., Furst, Daniel E., Parks, Deborah, Kavanaugh, Arthur, O'Dell, James, King, Charles, Leong, Amye, Matteson, Eric L., Schousboe, John T., Drevlow, Barbara, Ginsberg, Seth, Grober, James, St.Clair, E. William, Tindall, Elizabeth, Miller, Amy S., McAlindon, Timothy

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Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages von Kieft, Kristopher, Zhou, Zhichao, Anderson, Rika E., Buchan, Alison, Campbell, Barbara J., Hallam, Steven J., Hess, Matthias, Sullivan, Matthew B., Walsh, David A., Roux, Simon, Anantharaman, Karthik

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Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Phages von Barylski, Jakub, Enault, François, Dutilh, Bas E., Schuller, Margo B.P., Edwards, Robert A., Gillis, Annika, Klumpp, Jochen, Knezevic, Petar, Krupovic, Mart, Kuhn, Jens H., Lavigne, Rob, Oksanen, Hanna M., Sullivan, Matthew B., Jang, Ho Bin, Simmonds, Peter, Aiewsakun, Pakorn, Wittmann, Johannes, Tolstoy, Igor, Brister, J. Rodney, Kropinski, Andrew M., Adriaenssens, Evelien M.

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Depth-stratified functional and taxonomic niche specialization in the ‘core’ and ‘flexible’ Pacific Ocean Virome von Hurwitz, Bonnie L, Brum, Jennifer R, Sullivan, Matthew B

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