Recruited inflammatory monocytes stimulate antiviral Th1 immunity in infected tissue von Iijima, Norifumi, Mattei, Lisa M, Iwasaki, Akiko

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Lack of detection of a human placenta microbiome in samples from preterm and term deliveries von Leiby, Jacob S, McCormick, Kevin, Sherrill-Mix, Scott, Clarke, Erik L, Kessler, Lyanna R, Taylor, Louis J, Hofstaedter, Casey E, Roche, Aoife M, Mattei, Lisa M, Bittinger, Kyle, Elovitz, Michal A, Leite, Rita, Parry, Samuel, Bushman, Frederic D

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Host immunity modulates the efficacy of microbiota transplantation for treatment of Clostridioides difficile infection von Littmann, Eric R., Lee, Jung-Jin, Denny, Joshua E., Alam, Zahidul, Maslanka, Jeffrey R., Zarin, Isma, Matsuda, Rina, Carter, Rebecca A., Susac, Bože, Saffern, Miriam S., Fett, Bryton, Mattei, Lisa M., Bittinger, Kyle, Abt, Michael C.

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Investigating hospital Mycobacterium chelonae infection using whole genome sequencing and hybrid assembly von Gu, Christopher H., Zhao, Chunyu, Hofstaedter, Casey, Tebas, Pablo, Glaser, Laurel, Baldassano, Robert, Bittinger, Kyle, Mattei, Lisa M., Bushman, Frederic D.

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Triclosan has a robust, yet reversible impact on human gut microbial composition in vitro von Mahalak, Karley K, Firrman, Jenni, Lee, Jung-Jin, Bittinger, Kyle, Nuñez, Alberto, Mattei, Lisa M, Zhang, Huanjia, Fett, Bryton, Bobokalonov, Jamshed, Arango-Argoty, Gustavo, Zhang, Liqing, Zhang, Guodong, Liu, Lin Shu

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CD4⁺ T cells support cytotoxic T lymphocyte priming by controlling lymph node input von Kumamoto, Yosuke, Mattei, Lisa M., Sellers, Stephanie, Payne, Geoffrey W., Iwasaki, Akiko

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Persistence of the Probiotic Lacticaseibacillus rhamnosus Strain GG (LGG) in an In Vitro Model of the Gut Microbiome von Mahalak, Karley K., Firrman, Jenni, Bobokalonov, Jamshed, Narrowe, Adrienne B., Bittinger, Kyle, Daniel, Scott, Tanes, Ceylan, Mattei, Lisa M., Zeng, Wei-Bin, Soares, Jason W., Kobori, Masuko, Lemons, Johanna M. S., Tomasula, Peggy M., Liu, LinShu

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Modulation of the Gut Microbiota Structure and Function by Two Structurally Different Lemon Pectins von Firrman, Jenni, Mahalak, Karley, Bobokalonov, Jamshed, Liu, LinShu, Lee, Jung-Jin, Bittinger, Kyle, Mattei, Lisa M, Gadaingan, Rizalina, Narrowe, Adrienne B, Lemons, Johanna M S

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Preterm infants at low risk for early-onset sepsis differ in early fecal microbiome assembly von Mukhopadhyay, Sagori, Lee, Jung-Jin, Hartman, Erica, Woodford, Emily, Dhudasia, Miren B., Mattei, Lisa M., Daniel, Scott G., Wade, Kelly C., Underwood, Mark A., Bittinger, Kyle

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Detection and elimination of a novel non-toxigenic Clostridioides difficile strain from the microbiota of a mouse colony von Maslanka, Jeffrey R., Gu, Christopher H., Zarin, Isma, Denny, Joshua E., Broadaway, Susan, Fett, Bryton, Mattei, Lisa M., Walk, Seth T., Abt, Michael C.

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Segmented Filamentous Bacteria Prevent and Cure Rotavirus Infection von Shi, Zhenda, Zou, Jun, Zhang, Zhan, Zhao, Xu, Noriega, Juan, Zhang, Benyue, Zhao, Chunyu, Ingle, Harshad, Bittinger, Kyle, Mattei, Lisa M., Pruijssers, Andrea J., Plemper, Richard K., Nice, Timothy J., Baldridge, Megan T., Dermody, Terence S., Chassaing, Benoit, Gewirtz, Andrew T.

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Toll-Like Receptor 9 in Plasmacytoid Dendritic Cells Fails To Detect Parvoviruses von Mattei, Lisa M, Cotmore, Susan F, Li, Lei, Tattersall, Peter, Iwasaki, Akiko

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The Location of Asparagine-linked Glycans on West Nile Virions Controls Their Interactions with CD209 (Dendritic Cell-specific ICAM-3 Grabbing Nonintegrin) von Davis, Carl W., Mattei, Lisa M., Nguyen, Hai-Yen, Ansarah-Sobrinho, Camilo, Doms, Robert W., Pierson, Theodore C.

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Host mitochondria influence gut microbiome diversity: A role for ROS von Yardeni, Tal, Tanes, Ceylan E, Bittinger, Kyle, Mattei, Lisa M, Schaefer, Patrick M, Singh, Larry N, Wu, Gary D, Murdock, Deborah G, Wallace, Douglas C

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In Vivo Requirement for Atg5 in Antigen Presentation by Dendritic Cells von Lee, Heung Kyu, Mattei, Lisa M., Steinberg, Benjamin E., Alberts, Philipp, Lee, Yun Hee, Chervonsky, Alexander, Mizushima, Noboru, Grinstein, Sergio, Iwasaki, Akiko

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Decreased Intestinal Microbiome Diversity in Pediatric Sepsis: A Conceptual Framework for Intestinal Dysbiosis to Influence Immunometabolic Function von Weiss, Scott L, Bittinger, Kyle, Lee, Jung-Jin, Friedman, Elliot S, Mattei, Lisa M, Graham, Kathryn, Zhang, Donglan, Bush, Jeny, Balamuth, Fran, McGowan, Jr, Francis X, Bushman, Frederic D, Baldassano, Robert N, Wu, Gary D, Wallace, Douglas C, Collman, Ronald G

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Pathoadaptive Deletion in an Enteroaggregative Escherichia coli Outbreak Strain Enhances Virulence in a Caenorhabditis elegans Model von Hwang, Jennifer, Mattei, Lisa M, VanArendonk, Laura G, Meneely, Philip M, Okeke, Iruka N

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Multi-omic Analysis of the Interaction between Clostridioides difficile Infection and Pediatric Inflammatory Bowel Disease von Bushman, Frederic D., Conrad, Maire, Ren, Yue, Zhao, Chunyu, Gu, Christopher, Petucci, Christopher, Kim, Min-Soo, Abbas, Arwa, Downes, Kevin J., Devas, Nina, Mattei, Lisa M., Breton, Jessica, Kelsen, Judith, Marakos, Sarah, Galgano, Alissa, Kachelries, Kelly, Erlichman, Jessi, Hart, Jessica L., Moraskie, Michael, Kim, Dorothy, Zhang, Huanjia, Hofstaedter, Casey E., Wu, Gary D., Lewis, James D., Zackular, Joseph P., Li, Hongzhe, Bittinger, Kyle, Baldassano, Robert

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Toxin-positive Clostridium difficile latently infect mouse colonies and protect against highly pathogenic C. difficile von Etienne-Mesmin, Lucie, Chassaing, Benoit, Adekunle, Oluwaseyi, Mattei, Lisa M, Bushman, Frederic D, Gewirtz, Andrew T

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Dynamic Changes in the Nasal Microbiome Associated With Disease Activity in Patients With Granulomatosis With Polyangiitis von Rhee, Rennie L., Lu, Jiarui, Bittinger, Kyle, Lee, Jung‐Jin, Mattei, Lisa M., Sreih, Antoine G., Chou, Sherry, Miner, Jonathan J., Cohen, Noam A., Kelly, Brendan J., Lee, Hongzhe, Grayson, Peter C., Collman, Ronald G., Merkel, Peter A.

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