Noninvasive Urinary Metabolomic Profiling Identifies Diagnostic and Prognostic Markers in Lung Cancer von MATHE, Ewy A, PATTERSON, Andrew D, KAZANDJIAN, Dickran G, HATZAKIS, Emmanuel, GONZALEZ, Frank J, HARRIS, Curtis C, HAZNADAR, Majda, MANNA, Soumen K, KRAUSZ, Kristopher W, BOWMAN, Elise D, SHIELDS, Peter G, IDLE, Jeffrey R, SMITH, Philip B, ANAMI, Katsuhiro

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Exploring NCATS in-house biomedical data for evidence-based drug repurposing von Liu, Fang, Patt, Andrew, Chen, Chloe, Huang, Ruili, Xu, Yanji, Mathé, Ewy A, Zhu, Qian

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Integrative rare disease biomedical profile based network supporting drug repurposing or repositioning, a case study of glioblastoma von McGowan, Erin, Sanjak, Jaleal, Mathé, Ewy A, Zhu, Qian

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Metabolomics and Multi-Omics Integration: A Survey of Computational Methods and Resources von Eicher, Tara, Kinnebrew, Garrett, Patt, Andrew, Spencer, Kyle, Ying, Kevin, Ma, Qin, Machiraju, Raghu, Mathé, And Ewy A

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Recent advances in mass spectrometry-based computational metabolomics von Ebbels, Timothy M.D., van der Hooft, Justin J.J., Chatelaine, Haley, Broeckling, Corey, Zamboni, Nicola, Hassoun, Soha, Mathé, Ewy A.

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Self-organizing maps with variable neighborhoods facilitate learning of chromatin accessibility signal shapes associated with regulatory elements von Eicher, Tara, Chan, Jany, Luu, Han, Machiraju, Raghu, Mathé, Ewy A

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Urinary Metabolite Risk Biomarkers of Lung Cancer: A Prospective Cohort Study von Haznadar, Majda, Cai, Qiuyin, Krausz, Kristopher W, Bowman, Elise D, Margono, Ezra, Noro, Rintaro, Thompson, Matthew D, Mathé, Ewy A, Munro, Heather M, Steinwandel, Mark D, Gonzalez, Frank J, Blot, William J, Harris, Curtis C

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NCATS Inxight Drugs: a comprehensive and curated portal for translational research von Siramshetty, Vishal B, Grishagin, Ivan, Nguyễn, Ðắc-Trung, Peryea, Tyler, Skovpen, Yulia, Stroganov, Oleg, Katzel, Daniel, Sheils, Timothy, Jadhav, Ajit, Mathé, Ewy A, Southall, Noel T

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Effects of Electronic Cigarette Constituents on the Human Lung: A Pilot Clinical Trial von Song, Min-Ae, Reisinger, Sarah A, Freudenheim, Jo L, Brasky, Theodore M, Mathé, Ewy A, McElroy, Joseph P, Nickerson, Quentin A, Weng, Daniel Y, Wewers, Mark D, Shields, Peter G

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Identification of transcription factor co-regulators that drive prostate cancer progression von Siddappa, Manjunath, Wani, Sajad A., Long, Mark D., Leach, Damien A., Mathé, Ewy A., Bevan, Charlotte L., Campbell, Moray J.

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Using in vitro ADME data for lead compound selection: An emphasis on PAMPA pH 5 permeability and oral bioavailability von Williams, Jordan, Siramshetty, Vishal, Nguyễn, Ðắc-Trung, Padilha, Elias Carvalho, Kabir, Md, Yu, Kyeong-Ri, Wang, Amy Q., Zhao, Tongan, Itkin, Misha, Shinn, Paul, Mathé, Ewy A., Xu, Xin, Shah, Pranav

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IntLIM: integration using linear models of metabolomics and gene expression data von Siddiqui, Jalal K, Baskin, Elizabeth, Liu, Mingrui, Cantemir-Stone, Carmen Z, Zhang, Bofei, Bonneville, Russell, McElroy, Joseph P, Coombes, Kevin R, Mathé, Ewy A

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An Integrated Prognostic Classifier for Stage I Lung Adenocarcinoma Based on mRNA, microRNA, and DNA Methylation Biomarkers von Robles, Ana I., Arai, Eri, Mathé, Ewy A., Okayama, Hirokazu, Schetter, Aaron J., Brown, Derek, Petersen, David, Bowman, Elise D., Noro, Rintaro, Welsh, Judith A., Edelman, Daniel C., Stevenson, Holly S., Wang, Yonghong, Tsuchiya, Naoto, Kohno, Takashi, Skaug, Vidar, Mollerup, Steen, Haugen, Aage, Meltzer, Paul S., Yokota, Jun, Kanai, Yae, Harris, Curtis C.

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Development and validation of PAMPA-BBB QSAR model to predict brain penetration potential of novel drug candidates von Kato, Rintaro, Zeng, Wenyu, Siramshetty, Vishal B, Williams, Jordan, Kabir, Md, Hagen, Natalie, Padilha, Elias C, Wang, Amy Q, Mathé, Ewy A, Xu, Xin, Shah, Pranav

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BRD4 Profiling Identifies Critical Chronic Lymphocytic Leukemia Oncogenic Circuits and Reveals Sensitivity to PLX51107, a Novel Structurally Distinct BET Inhibitor von Ozer, Hatice Gulcin, El-Gamal, Dalia, Powell, Ben, Hing, Zachary A, Blachly, James S, Harrington, Bonnie, Mitchell, Shaneice, Grieselhuber, Nicole R, Williams, Katie, Lai, Tzung-Huei, Alinari, Lapo, Baiocchi, Robert A, Brinton, Lindsey, Baskin, Elizabeth, Cannon, Matthew, Beaver, Larry, Goettl, Virginia M, Lucas, David M, Woyach, Jennifer A, Sampath, Deepa, Lehman, Amy M, Yu, Lianbo, Zhang, Jiazhong, Ma, Yan, Zhang, Ying, Spevak, Wayne, Shi, Songyuan, Severson, Paul, Shellooe, Rafe, Carias, Heidi, Tsang, Garson, Dong, Ken, Ewing, Todd, Marimuthu, Adhirai, Tantoy, Christina, Walters, Jason, Sanftner, Laura, Rezaei, Hamid, Nespi, Marika, Matusow, Bernice, Habets, Gaston, Ibrahim, Prabha, Zhang, Chao, Mathé, Ewy A, Bollag, Gideon, Byrd, John C, Lapalombella, Rosa

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Scientific evidence based rare disease research discovery with research funding data in knowledge graph von Zhu, Qian, Nguyễn, Ðắc-Trung, Sheils, Timothy, Alyea, Gioconda, Sid, Eric, Xu, Yanji, Dickens, James, Mathé, Ewy A, Pariser, Anne

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Modulation of anxiety-like behavior in galactooligosaccharide-fed mice: A potential role for bacterial tryptophan metabolites and reduced microglial reactivity von Spencer, Kyle D., Bline, Heather, Chen, Helen J., Verosky, Branden G., Hilt, Miranda E., Jaggers, Robert M., Gur, Tamar L., Mathé, Ewy A., Bailey, Michael T.

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A Workflow of Integrated Resources to Catalyze Network Pharmacology Driven COVID-19 Research von Zahoránszky-Kőhalmi, Gergely, Siramshetty, Vishal B., Kumar, Praveen, Gurumurthy, Manideep, Grillo, Busola, Mathew, Biju, Metaxatos, Dimitrios, Backus, Mark, Mierzwa, Tim, Simon, Reid, Grishagin, Ivan, Brovold, Laura, Mathé, Ewy A., Hall, Matthew D., Michael, Samuel G., Godfrey, Alexander G., Mestres, Jordi, Jensen, Lars J., Oprea, Tudor I.

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Nucleotide, Phospholipid, and Kynurenine Metabolites Are Robustly Associated with COVID-19 Severity and Time of Plasma Sample Collection in a Prospective Cohort Study von Chatelaine, Haley A S, Chen, Yulu, Braisted, John, Chu, Su H, Chen, Qingwen, Stav, Meryl, Begum, Sofina, Diray-Arce, Joann, Sanjak, Jaleal, Huang, Mengna, Lasky-Su, Jessica, Mathé, Ewy A

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microRNA and inflammatory gene expression as prognostic marker for overall survival in esophageal squamous cell carcinoma von Zhao, Yiqiang, Schetter, Aaron J., Yang, Geoffrey B., Nguyen, Giang, Mathé, Ewy A., Li, Peng, Cai, Hong, Yu, Lei, Liu, Fangfang, Hang, Dong, Yang, Haijun, Wang, Xin Wei, Ke, Yang, Harris, Curtis C.

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