Somatic mutational landscape of AML with inv(16) or t(8;21) identifies patterns of clonal evolution in relapse leukemia von Sood, R, Hansen, N F, Donovan, F X, Carrington, B, Bucci, D, Maskeri, B, Young, A, Trivedi, N S, Kohlschmidt, J, Stone, R M, Caligiuri, M A, Chandrasekharappa, S C, Marcucci, G, Mullikin, J C, Bloomfield, C D, Liu, P

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Comparative analyses of multi-species sequences from targeted genomic regions von Thomas, J. W., Touchman, J. W., Blakesley, R. W., Bouffard, G. G., Beckstrom-Sternberg, S. M., Margulies, E. H., Blanchette, M., Siepel, A. C., Thomas, P. J., McDowell, J. C., Maskeri, B., Hansen, N. F., Schwartz, M. S., Weber, R. J., Kent, W. J., Karolchik, D., Bruen, T. C., Bevan, R., Cutler, D. J., Schwartz, S., Elnitski, L., Idol, J. R., Prasad, A. B., Lee-Lin, S.-Q., Maduro, V. V. B., Summers, T. J., Portnoy, M. E., Dietrich, N. L., Akhter, N., Ayele, K., Benjamin, B., Cariaga, K., Brinkley, C. P., Brooks, S. Y., Granite, S., Guan, X., Gupta, J., Haghighi, P., Ho, S.-L., Huang, M. C., Karlins, E., Laric, P. L., Legaspi, R., Lim, M. J., Maduro, Q. L., Masiello, C. A., Mastrian, S. D., McCloskey, J. C., Pearson, R., Stantripop, S., Tiongson, E. E., Tran, J. T., Tsurgeon, C., Vogt, J. L., Walker, M. A., Wetherby, K. D., Wiggins, L. S., Young, A. C., Zhang, L.-H., Osoegawa, K., Zhu, B., Zhao, B., Shu, C. L., De Jong, P. J., Lawrence, C. E., Smit, A. F., Chakravarti, A., Haussler, D., Green, P., Miller, W., Green, E. D.

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Somatic mutational landscape of AML with inv identifies patterns of clonal evolution in relapse leukemia von Sood, R, Hansen, N.F, Donovan, F.X, Carrington, B, Bucci, D, Maskeri, B, Young, A, Trivedi, N.S, Kohlschmidt, J, Stone, R.M, Caligiuri, M.A, Chandrasekharappa, S.C, Marcucci, G, Mullikin, J.C, Bloomfield, C.D, Liu, P

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Transcription-associated mutational asymmetry in mammalian evolution von Green, Phil, Ewing, Brent, Miller, Webb, Thomas, Pamela J., Green, Eric D.

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An intermediate grade of finished genomic sequence suitable for comparative analyses von Blakesley, Robert W, Hansen, Nancy F, Mullikin, James C, Thomas, Pamela J, McDowell, Jennifer C, Maskeri, Baishali, Young, Alice C, Benjamin, Beatrice, Brooks, Shelise Y, Coleman, Bradley I, Gupta, Jyoti, Ho, Shi-Ling, Karlins, Eric M, Maduro, Quino L, Stantripop, Sirintorn, Tsurgeon, Cyrus, Vogt, Jennifer L, Walker, Michelle A, Masiello, Catherine A, Guan, Xiaobin, Bouffard, Gerard G, Green, Eric D

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Uprobe: a genome-wide universal probe resource for comparative physical mapping in vertebrates von Kellner, Wendy A, Sullivan, Robert T, Carlson, Brian H, Thomas, James W

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Both normal and transforming PCPH proteins have guanosine diphosphatase activity but only the oncoprotein cooperates with ras in activating extracellular signal-regulated kinase ER... von RECIO, J. A, PAEZ, J. G, MASKERI, B, LOVELAND, M, VELASCO, J. A, NOTARIO, V

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Co-evolution of a broadly neutralizing HIV-1 antibody and founder virus von Liao, Hua-Xin, Lynch, Rebecca, Zhou, Tongqing, Gao, Feng, Alam, S. Munir, Boyd, Scott D., Fire, Andrew Z., Roskin, Krishna M., Schramm, Chaim A., Zhang, Zhenhai, Zhu, Jiang, Shapiro, Lawrence, Mullikin, James C., Gnanakaran, S., Hraber, Peter, Wiehe, Kevin, Kelsoe, Garnett, Yang, Guang, Xia, Shi-Mao, Montefiori, David C., Parks, Robert, Lloyd, Krissey E., Scearce, Richard M., Soderberg, Kelly A., Cohen, Myron, Kamanga, Gift, Louder, Mark K., Tran, Lillian M., Chen, Yue, Cai, Fangping, Chen, Sheri, Moquin, Stephanie, Du, Xiulian, Joyce, M. Gordon, Srivatsan, Sanjay, Zhang, Baoshan, Zheng, Anqi, Shaw, George M., Hahn, Beatrice H., Kepler, Thomas B., Korber, Bette T. M., Kwong, Peter D., Mascola, John R., Haynes, Barton F.

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A Neutralizing Antibody Recognizing Primarily N-Linked Glycan Targets the Silent Face of the HIV Envelope von Zhou, Tongqing, Zheng, Anqi, Baxa, Ulrich, Chuang, Gwo-Yu, Georgiev, Ivelin S., Kong, Rui, O’Dell, Sijy, Shahzad-ul-Hussan, Syed, Shen, Chen-Hsiang, Tsybovsky, Yaroslav, Bailer, Robert T., Gift, Syna K., Louder, Mark K., McKee, Krisha, Rawi, Reda, Stevenson, Catherine H., Stewart-Jones, Guillaume B.E., Taft, Justin D., Waltari, Eric, Yang, Yongping, Zhang, Baoshan, Shivatare, Sachin S., Shivatare, Vidya S., Lee, Chang-Chun D., Wu, Chung-Yi, Benjamin, Betty, Blakesley, Robert, Bouffard, Gerry, Brooks, Shelise, Coleman, Holly, Dekhtyar, Mila, Gregory, Michael, Guan, Xiaobin, Gupta, Jyoti, Han, Joel, Hargrove, April, Ho, Shiling, Legaspi, Richelle, Maduro, Quino, Masiello, Cathy, Maskeri, Baishali, McDowell, Jenny, Montemayor, Casandra, Mullikin, James, Park, Morgan, Riebow, Nancy, Schandler, Karen, Schmidt, Brian, Sison, Christina, Stantripop, Mal, Thomas, James, Thomas, Pam, Vemulapalli, Meg, Young, Alice, Mullikin, James C., Bewley, Carole A., Burton, Dennis R., Polonis, Victoria R., Shapiro, Lawrence, Wong, Chi-Huey, Mascola, John R., Kwong, Peter D., Wu, Xueling

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Evaluation of variant detection software for pooled next-generation sequence data von Huang, Howard W, Mullikin, James C, Hansen, Nancy F

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Somatic Mutational Landscape of AML with Inv(16) and t(8;21) Identifies Two Distinct Patterns in Relapse Tumors von Sood, Raman B., Hansen, Nancy F, Donovan, Frank X, Carrington, Blake, Maskeri, Baishali, Young, Alice, Bucci, Donna, Chandrasekharaappa, Settara, Mullikin, James C, Bloomfield, Clara D., Marcucci, Guido, Liu, Paul

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Analysis of immunoglobulin transcripts and hypermutation following SHIV(AD8) infection and protein-plus-adjuvant immunization von Francica, Joseph R, Sheng, Zizhang, Zhang, Zhenhai, Nishimura, Yoshiaki, Shingai, Masashi, Ramesh, Akshaya, Keele, Brandon F, Schmidt, Stephen D, Flynn, Barbara J, Darko, Sam, Lynch, Rebecca M, Yamamoto, Takuya, Matus-Nicodemos, Rodrigo, Wolinsky, David, Nason, Martha, Valiante, Nicholas M, Malyala, Padma, De Gregorio, Ennio, Barnett, Susan W, Singh, Manmohan, O'Hagan, Derek T, Koup, Richard A, Mascola, John R, Martin, Malcolm A, Kepler, Thomas B, Douek, Daniel C, Shapiro, Lawrence, Seder, Robert A

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Effort required to finish shotgun-generated genome sequences differs significantly among vertebrates von Blakesley, Robert W, Hansen, Nancy F, Gupta, Jyoti, McDowell, Jennifer C, Maskeri, Baishali, Barnabas, Beatrice B, Brooks, Shelise Y, Coleman, Holly, Haghighi, Payam, Ho, Shi-Ling, Schandler, Karen, Stantripop, Sirintorn, Vogt, Jennifer L, Thomas, Pamela J, Bouffard, Gerard G, Green, Eric D

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Comparative sequencing provides insights about the structure and conservation of marsupial and monotreme genomes von Margulies, Elliott H, Maduro, Valerie V B, Thomas, Pamela J, Tomkins, Jeffery P, Amemiya, Chris T, Luo, Meizhong, Green, Eric D

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