BIGSdb: Scalable analysis of bacterial genome variation at the population level von Jolley, Keith A, Maiden, Martin C J

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Comparative analysis of core genome MLST and SNP typing within a European Salmonella serovar Enteritidis outbreak von Pearce, Madison E., Alikhan, Nabil-Fareed, Dallman, Timothy J., Zhou, Zhemin, Grant, Kathie, Maiden, Martin C.J.

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Horizontally Transmitted Symbionts and Host Colonization of Ecological Niches von Henry, Lee M., Peccoud, Jean, Simon, Jean-Christophe, Hadfield, Jarrod D., Maiden, Martin J.C., Ferrari, Julia, Godfray, H. Charles J.

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Impact of recombination on bacterial evolution von Didelot, Xavier, Maiden, Martin C.J

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Meningococcal carriage and disease—Population biology and evolution von Caugant, Dominique A, Maiden, Martin C.J

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Meningococcal B Vaccine and Meningococcal Carriage in Adolescents in Australia von Marshall, Helen S, McMillan, Mark, Koehler, Ann P, Lawrence, Andrew, Sullivan, Thomas R, MacLennan, Jenny M, Maiden, Martin C.J, Ladhani, Shamez N, Ramsay, Mary E, Trotter, Caroline, Borrow, Ray, Finn, Adam, Kahler, Charlene M, Whelan, Jane, Vadivelu, Kumaran, Richmond, Peter

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Multilocus sequence typing of bacteria von MAIDEN, Martin C. J

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MLST revisited: the gene-by-gene approach to bacterial genomics von Maiden, Martin C. J., van Rensburg, Melissa J. Jansen, Bray, James E., Earle, Sarah G., Ford, Suzanne A., Jolley, Keith A., McCarthy, Noel D.

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A gene-by-gene population genomics platform: de novo assembly, annotation and genealogical analysis of 108 representative Neisseria meningitidis genomes von Bratcher, Holly B, Corton, Craig, Jolley, Keith A, Parkhill, Julian, Maiden, Martin C J

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A reference pan-genome approach to comparative bacterial genomics: identification of novel epidemiological markers in pathogenic Campylobacter von Méric, Guillaume, Yahara, Koji, Mageiros, Leonardos, Pascoe, Ben, Maiden, Martin C J, Jolley, Keith A, Sheppard, Samuel K

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Open-access bacterial population genomics: BIGSdb software, the PubMLST.org website and their applications von Jolley, Keith A, Bray, James E, Maiden, Martin C J

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Multilocus Sequence Typing System for the Endosymbiont Wolbachia pipientis von Baldo, Laura, Dunning Hotopp, Julie C, Jolley, Keith A, Bordenstein, Seth R, Biber, Sarah A, Choudhury, Rhitoban Ray, Hayashi, Cheryl, Maiden, Martin C.J, Tettelin, Hervè, Werren, John H

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Sex and virulence in Escherichia coli: an evolutionary perspective von Wirth, Thierry, Falush, Daniel, Lan, Ruiting, Colles, Frances, Mensa, Patience, Wieler, Lothar H., Karch, Helge, Reeves, Peter R., Maiden, Martin C. J., Ochman, Howard, Achtman, Mark

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A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies von Bridel, Sébastien, Bouchez, Valérie, Brancotte, Bryan, Hauck, Sofia, Armatys, Nathalie, Landier, Annie, Mühle, Estelle, Guillot, Sophie, Toubiana, Julie, Maiden, Martin C. J., Jolley, Keith A., Brisse, Sylvain

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Convergence of Campylobacter Species: Implications for Bacterial Evolution von Sheppard, Samuel K, McCarthy, Noel D, Falush, Daniel, Maiden, Martin C.J

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Diversity and distribution of nuclease bacteriocins in bacterial genomes revealed using Hidden Markov Models von Sharp, Connor, Bray, James, Housden, Nicholas G, Maiden, Martin C J, Kleanthous, Colin

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Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis von Méric, Guillaume, Mageiros, Leonardos, Pensar, Johan, Laabei, Maisem, Yahara, Koji, Pascoe, Ben, Kittiwan, Nattinee, Tadee, Phacharaporn, Post, Virginia, Lamble, Sarah, Bowden, Rory, Bray, James E., Morgenstern, Mario, Jolley, Keith A., Maiden, Martin C. J., Feil, Edward J., Didelot, Xavier, Miragaia, Maria, de Lencastre, Herminia, Moriarty, T. Fintan, Rohde, Holger, Massey, Ruth, Mack, Dietrich, Corander, Jukka, Sheppard, Samuel K.

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Multi locus sequence typing of Chlamydia reveals an association between Chlamydia psittaci genotypes and host species von Pannekoek, Yvonne, Dickx, Veerle, Beeckman, Delphine S A, Jolley, Keith A, Keijzers, Wendy C, Vretou, Evangelia, Maiden, Martin C J, Vanrompay, Daisy, van der Ende, Arie

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Description and nomenclature of Neisseria meningitidis capsule locus von Harrison, Odile B, Claus, Heike, Jiang, Ying, Bennett, Julia S, Bratcher, Holly B, Jolley, Keith A, Corton, Craig, Care, Rory, Poolman, Jan T, Zollinger, Wendell D, Frasch, Carl E, Stephens, David S, Feavers, Ian, Frosch, Matthias, Parkhill, Julian, Vogel, Ulrich, Quail, Michael A, Bentley, Stephen D, Maiden, Martin C J

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Distribution of class 1 integrons in historic and contemporary collections of human pathogenic Escherichia coli von Sütterlin, Susanne, Bray, James E, Maiden, Martin C. J, Tano, Eva

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