BIGSdb: Scalable analysis of bacterial genome variation at the population level von Jolley, Keith A, Maiden, Martin C J

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A reference pan-genome approach to comparative bacterial genomics: identification of novel epidemiological markers in pathogenic Campylobacter von Méric, Guillaume, Yahara, Koji, Mageiros, Leonardos, Pascoe, Ben, Maiden, Martin C J, Jolley, Keith A, Sheppard, Samuel K

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Sex and virulence in Escherichia coli: an evolutionary perspective von Wirth, Thierry, Falush, Daniel, Lan, Ruiting, Colles, Frances, Mensa, Patience, Wieler, Lothar H., Karch, Helge, Reeves, Peter R., Maiden, Martin C. J., Ochman, Howard, Achtman, Mark

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A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies von Bridel, Sébastien, Bouchez, Valérie, Brancotte, Bryan, Hauck, Sofia, Armatys, Nathalie, Landier, Annie, Mühle, Estelle, Guillot, Sophie, Toubiana, Julie, Maiden, Martin C. J., Jolley, Keith A., Brisse, Sylvain

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Multilocus Sequence Typing System for the Endosymbiont Wolbachia pipientis von Baldo, Laura, Dunning Hotopp, Julie C, Jolley, Keith A, Bordenstein, Seth R, Biber, Sarah A, Choudhury, Rhitoban Ray, Hayashi, Cheryl, Maiden, Martin C.J, Tettelin, Hervè, Werren, John H

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Meningococcal carriage and disease—Population biology and evolution von Caugant, Dominique A, Maiden, Martin C.J

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Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis von Méric, Guillaume, Mageiros, Leonardos, Pensar, Johan, Laabei, Maisem, Yahara, Koji, Pascoe, Ben, Kittiwan, Nattinee, Tadee, Phacharaporn, Post, Virginia, Lamble, Sarah, Bowden, Rory, Bray, James E., Morgenstern, Mario, Jolley, Keith A., Maiden, Martin C. J., Feil, Edward J., Didelot, Xavier, Miragaia, Maria, de Lencastre, Herminia, Moriarty, T. Fintan, Rohde, Holger, Massey, Ruth, Mack, Dietrich, Corander, Jukka, Sheppard, Samuel K.

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Campylobacter Genotyping to Determine the Source of Human Infection von Sheppard, Samuel K., Dallas, John F., Strachan, Norval J. C., MacRae, Marian, McCarthy, Noel D., Wilson, Daniel J., Gormley, Fraser J., Falush, Daniel, Ogden, Iain D., Maiden, Martin C. J., Forbes, Ken J.

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Cryptic ecology among host generalist Campylobacter jejuni in domestic animals von Sheppard, Samuel K, Cheng, Lu, Méric, Guillaume, Haan, Caroline P. A, Llarena, Ann‐Katrin, Marttinen, Pekka, Vidal, Ana, Ridley, Anne, Clifton‐Hadley, Felicity, Connor, Thomas R, Strachan, Norval J. C, Forbes, Ken, Colles, Frances M, Jolley, Keith A, Bentley, Stephen D, Maiden, Martin C. J, Hänninen, Marja‐Liisa, Parkhill, Julian, Hanage, William P, Corander, Jukka

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Multi locus sequence typing of Chlamydia reveals an association between Chlamydia psittaci genotypes and host species von Pannekoek, Yvonne, Dickx, Veerle, Beeckman, Delphine S A, Jolley, Keith A, Keijzers, Wendy C, Vretou, Evangelia, Maiden, Martin C J, Vanrompay, Daisy, van der Ende, Arie

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Diversity and distribution of nuclease bacteriocins in bacterial genomes revealed using Hidden Markov Models von Sharp, Connor, Bray, James, Housden, Nicholas G, Maiden, Martin C J, Kleanthous, Colin

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A genomic approach to bacterial taxonomy: an examination and proposed reclassification of species within the genus Neisseria von BENNETT, Julia S, JOLLEY, Keith A, EARLE, Sarah G, CORTON, Craig, BENTLEY, Stephen D, PARKHILL, Julian, MAIDEN, Martin C. J

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Progressive genome-wide introgression in agricultural Campylobacter coli von Sheppard, Samuel K., Didelot, Xavier, Jolley, Keith A., Darling, Aaron E., Pascoe, Ben, Meric, Guillaume, Kelly, David J., Cody, Alison, Colles, Frances M., Strachan, Norval J. C., Ogden, Iain D., Forbes, Ken, French, Nigel P., Carter, Philip, Miller, William G., McCarthy, Noel D., Owen, Robert, Litrup, Eva, Egholm, Michael, Affourtit, Jason P., Bentley, Stephen D., Parkhill, Julian, Maiden, Martin C. J., Falush, Daniel

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Gut microbiota of the critically endangered Saiga antelope across two wild populations in a year without mass mortality von Hanski, Eveliina, Khanyari, Munib, Li, Jingdi, Bates, Kieran A., Zuther, Steffen, Maiden, Martin C. J., Kock, Richard, Knowles, Sarah C. L.

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Host ecology regulates interspecies recombination in bacteria of the genus Campylobacter von Mourkas, Evangelos, Yahara, Koji, Bayliss, Sion C, Calland, Jessica K, Johansson, Håkan, Mageiros, Leonardos, Muñoz-Ramirez, Zilia Y, Futcher, Grant, Méric, Guillaume, Hitchings, Matthew D, Sandoval-Motta, Santiago, Torres, Javier, Jolley, Keith A, Maiden, Martin C J, Ellström, Patrik, Waldenström, Jonas, Pascoe, Ben, Sheppard, Samuel K

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Distribution of class 1 integrons in historic and contemporary collections of human pathogenic Escherichia coli von Sütterlin, Susanne, Bray, James E, Maiden, Martin C. J, Tano, Eva

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Candida orthopsilosis and Candida metapsilosis spp. nov. To Replace Candida parapsilosis Groups II and III von Tavanti, Arianna, Davidson, Amanda D, Gow, Neil A. R, Maiden, Martin C. J, Odds, Frank C

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Profiling IgG and IgA antibody responses during vaccination and infection in a high-risk gonorrhoea population von Stejskal, Lenka, Thistlethwaite, Angela, Ramirez-Bencomo, Fidel, Rashmi, Smruti, Harrison, Odile, Feavers, Ian M., Maiden, Martin C. J., Jerse, Ann, Barnes, Grace, Chirro, Oscar, Chemweno, James, Nduati, Eunice, Cehovin, Ana, Tang, Christoph, Sanders, Eduard J., Derrick, Jeremy P.

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Convergence of Campylobacter Species: Implications for Bacterial Evolution von Sheppard, Samuel K, McCarthy, Noel D, Falush, Daniel, Maiden, Martin C.J

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Genome-wide association studies reveal the role of polymorphisms affecting factor H binding protein expression in host invasion by Neisseria meningitidis von Earle, Sarah G, Lobanovska, Mariya, Lavender, Hayley, Tang, Changyan, Exley, Rachel M, Ramos-Sevillano, Elisa, Browning, Douglas F, Kostiou, Vasiliki, Harrison, Odile B, Bratcher, Holly B, Varani, Gabriele, Tang, Christoph M, Wilson, Daniel J, Maiden, Martin C. J

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