Remaining Mysteries of Molecular Biology: The Role of Polyamines in the Cell von Miller-Fleming, Leonor, Olin-Sandoval, Viridiana, Campbell, Kate, Ralser, Markus

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DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput von Demichev, Vadim, Messner, Christoph B., Vernardis, Spyros I., Lilley, Kathryn S., Ralser, Markus

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Time-resolved in vivo ubiquitinome profiling by DIA-MS reveals USP7 targets on a proteome-wide scale von Steger, Martin, Demichev, Vadim, Backman, Mattias, Ohmayer, Uli, Ihmor, Phillip, Müller, Stefan, Ralser, Markus, Daub, Henrik

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Increasing the throughput of sensitive proteomics by plexDIA von Derks, Jason, Leduc, Andrew, Wallmann, Georg, Huffman, R. Gray, Willetts, Matthew, Khan, Saad, Specht, Harrison, Ralser, Markus, Demichev, Vadim, Slavov, Nikolai

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Ultra-fast proteomics with Scanning SWATH von Messner, Christoph B., Demichev, Vadim, Bloomfield, Nic, Yu, Jason S. L., White, Matthew, Kreidl, Marco, Egger, Anna-Sophia, Freiwald, Anja, Ivosev, Gordana, Wasim, Fras, Zelezniak, Aleksej, Jürgens, Linda, Suttorp, Norbert, Sander, Leif Erik, Kurth, Florian, Lilley, Kathryn S., Mülleder, Michael, Tate, Stephen, Ralser, Markus

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The widespread role of non-enzymatic reactions in cellular metabolism von Keller, Markus A, Piedrafita, Gabriel, Ralser, Markus

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Genetic architecture of host proteins involved in SARS-CoV-2 infection von Pietzner, Maik, Wheeler, Eleanor, Carrasco-Zanini, Julia, Raffler, Johannes, Kerrison, Nicola D., Oerton, Erin, Auyeung, Victoria P. W., Luan, Jian’an, Finan, Chris, Casas, Juan P., Ostroff, Rachel, Williams, Steve A., Kastenmüller, Gabi, Ralser, Markus, Gamazon, Eric R., Wareham, Nicholas J., Hingorani, Aroon D., Langenberg, Claudia

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dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts von Demichev, Vadim, Szyrwiel, Lukasz, Yu, Fengchao, Teo, Guo Ci, Rosenberger, George, Niewienda, Agathe, Ludwig, Daniela, Decker, Jens, Kaspar-Schoenefeld, Stephanie, Lilley, Kathryn S., Mülleder, Michael, Nesvizhskii, Alexey I., Ralser, Markus

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Temporal omics analysis in Syrian hamsters unravel cellular effector responses to moderate COVID-19 von Nouailles, Geraldine, Wyler, Emanuel, Pennitz, Peter, Postmus, Dylan, Vladimirova, Daria, Kazmierski, Julia, Pott, Fabian, Dietert, Kristina, Muelleder, Michael, Farztdinov, Vadim, Obermayer, Benedikt, Wienhold, Sandra-Maria, Andreotti, Sandro, Hoefler, Thomas, Sawitzki, Birgit, Drosten, Christian, Sander, Leif E., Suttorp, Norbert, Ralser, Markus, Beule, Dieter, Gruber, Achim D., Goffinet, Christine, Landthaler, Markus, Trimpert, Jakob, Witzenrath, Martin

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Non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible Archean ocean von Keller, Markus A, Turchyn, Alexandra V, Ralser, Markus

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The return of metabolism: biochemistry and physiology of the pentose phosphate pathway von Stincone, Anna, Prigione, Alessandro, Cramer, Thorsten, Wamelink, Mirjam M. C., Campbell, Kate, Cheung, Eric, Olin-Sandoval, Viridiana, Grüning, Nana-Maria, Krüger, Antje, Tauqeer Alam, Mohammad, Keller, Markus A., Breitenbach, Michael, Brindle, Kevin M., Rabinowitz, Joshua D., Ralser, Markus

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MSBooster: improving peptide identification rates using deep learning-based features von Yang, Kevin L., Yu, Fengchao, Teo, Guo Ci, Li, Kai, Demichev, Vadim, Ralser, Markus, Nesvizhskii, Alexey I.

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Ribosome profiling reveals ribosome stalling on tryptophan codons and ribosome queuing upon oxidative stress in fission yeast von Rubio, Angela, Ghosh, Sanjay, Mülleder, Michael, Ralser, Markus, Mata, Juan

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Mitochondrial respiration is required to provide amino acids during fermentative proliferation of fission yeast von Malecki, Michal, Kamrad, Stephan, Ralser, Markus, Bähler, Jürg

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The self-inhibitory nature of metabolic networks and its alleviation through compartmentalization von Alam, Mohammad Tauqeer, Olin-Sandoval, Viridiana, Stincone, Anna, Keller, Markus A., Zelezniak, Aleksej, Luisi, Ben F., Ralser, Markus

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Functional Metabolomics Describes the Yeast Biosynthetic Regulome von Mülleder, Michael, Calvani, Enrica, Alam, Mohammad Tauqeer, Wang, Richard Kangda, Eckerstorfer, Florian, Zelezniak, Aleksej, Ralser, Markus

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An appeal to magic? The discovery of a non-enzymatic metabolism and its role in the origins of life von Ralser, Markus

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Ultra-High-Throughput Clinical Proteomics Reveals Classifiers of COVID-19 Infection von Messner, Christoph B., Demichev, Vadim, Wendisch, Daniel, Michalick, Laura, White, Matthew, Freiwald, Anja, Textoris-Taube, Kathrin, Vernardis, Spyros I., Egger, Anna-Sophia, Kreidl, Marco, Ludwig, Daniela, Kilian, Christiane, Agostini, Federica, Zelezniak, Aleksej, Thibeault, Charlotte, Pfeiffer, Moritz, Hippenstiel, Stefan, Hocke, Andreas, von Kalle, Christof, Campbell, Archie, Hayward, Caroline, Porteous, David J., Marioni, Riccardo E., Langenberg, Claudia, Lilley, Kathryn S., Kuebler, Wolfgang M., Mülleder, Michael, Drosten, Christian, Suttorp, Norbert, Witzenrath, Martin, Kurth, Florian, Sander, Leif Erik, Ralser, Markus

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High-throughput proteomics of nanogram-scale samples with Zeno SWATH MS von Wang, Ziyue, Mülleder, Michael, Batruch, Ihor, Chelur, Anjali, Textoris-Taube, Kathrin, Schwecke, Torsten, Hartl, Johannes, Causon, Jason, Castro-Perez, Jose, Demichev, Vadim, Tate, Stephen, Ralser, Markus

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Cytosine DNA Methylation Is Found in Drosophila melanogaster but Absent in Saccharomyces cerevisiae, Schizosaccharomyces pombe, and Other Yeast Species von Capuano, Floriana, Mülleder, Michael, Kok, Robert, Blom, Henk J, Ralser, Markus

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