Multiplexed protein maps link subcellular organization to cellular states von Gut, Gabriele, Herrmann, Markus D, Pelkmans, Lucas

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Interoperable slide microscopy viewer and annotation tool for imaging data science and computational pathology von Gorman, Chris, Punzo, Davide, Octaviano, Igor, Pieper, Steven, Longabaugh, William J. R., Clunie, David A., Kikinis, Ron, Fedorov, Andrey Y., Herrmann, Markus D.

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Current clinical applications and potential perspective of micro-computed tomography in cardiovascular imaging: A systematic scoping review von Papazoglou, Andreas S., Karagiannidis, Efstratios, Moysidis, Dimitrios V., Sofidis, Georgios, Bompoti, Andreana, Stalikas, Nikolaos, Panteris, Eleftherios, Arvanitidis, Christos, Herrmann, Markus D., Michaelson, James S., Sianos, Georgios

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Data-analysis strategies for image-based cell profiling von Caicedo, Juan C, Cooper, Sam, Heigwer, Florian, Warchal, Scott, Qiu, Peng, Molnar, Csaba, Vasilevich, Aliaksei S, Barry, Joseph D, Bansal, Harmanjit Singh, Kraus, Oren, Wawer, Mathias, Paavolainen, Lassi, Herrmann, Markus D, Rohban, Mohammad, Hung, Jane, Hennig, Holger, Concannon, John, Smith, Ian, Clemons, Paul A, Singh, Shantanu, Rees, Paul, Horvath, Peter, Linington, Roger G, Carpenter, Anne E

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Isolated Whipple's Endocarditis: An Underestimated Diagnosis That Requires Molecular Analysis of Surgical Material von Herrmann, Markus D., MD, Neumayr, Annette, MD, Essig, Andreas, MD, Spiess, Jochen, MD, Merk, Johannes, MD, Möller, Peter, MD, Liebold, Andreas, MD, Barth, Thomas F.E., MD

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Volumetric Imaging of Lung Tissue at Micrometer Resolution: Clinical Applications of Micro-CT for the Diagnosis of Pulmonary Diseases von Bompoti, Andreana, Papazoglou, Andreas S., Moysidis, Dimitrios V., Otountzidis, Nikolaos, Karagiannidis, Efstratios, Stalikas, Nikolaos, Panteris, Eleftherios, Ganesh, Vijayakumar, Sanctuary, Thomas, Arvanitidis, Christos, Sianos, Georgios, Michaelson, James S., Herrmann, Markus D.

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Integrating the Health-care Enterprise Pathology and Laboratory Medicine Guideline for Digital Pathology Interoperability von Dash, Rajesh C., Jones, Nicholas, Merrick, Riki, Haroske, Gunter, Harrison, James, Sayers, Craig, Haarselhorst, Nick, Wintell, Mikael, Herrmann, Markus D., Macary, Frangois

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NCI Imaging Data Commons von Fedorov, Andrey, Longabaugh, William J R, Pot, David, Clunie, David A, Pieper, Steve, Aerts, Hugo J W L, Homeyer, André, Lewis, Rob, Akbarzadeh, Afshin, Bontempi, Dennis, Clifford, William, Herrmann, Markus D, Höfener, Henning, Octaviano, Igor, Osborne, Chad, Paquette, Suzanne, Petts, James, Punzo, Davide, Reyes, Madelyn, Schacherer, Daniela P, Tian, Mi, White, George, Ziegler, Erik, Shmulevich, Ilya, Pihl, Todd, Wagner, Ulrike, Farahani, Keyvan, Kikinis, Ron

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Computer vision for image-based transcriptomics von Stoeger, Thomas, Battich, Nico, Herrmann, Markus D., Yakimovich, Yauhen, Pelkmans, Lucas

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A Pathologist-Annotated Dataset for Validating Artificial Intelligence: A Project Description and Pilot Study von Dudgeon, Sarah N., Wen, Si, Hanna, Matthew G., Gupta, Rajarsi, Amgad, Mohamed, Sheth, Manasi, Marble, Hetal, Huang, Richard, Herrmann, Markus D., Szu, Clifford H., Tong, Darick, Werness, Bruce, Szu, Evan, Larsimont, Denis, Madabhushi, Anant, Hytopoulos, Evangelos, Chen, Weijie, Singh, Rajendra, Hart, Steven N., Sharma, Ashish, Saltz, Joel, Salgado, Roberto, Gallas, Brandon D.

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Volumetric Tissue Imaging of Surgical Tissue Specimens Using Micro–Computed Tomography: An Emerging Digital Pathology Modality for Nondestructive, Slide-Free Microscopy—Clinical Ap... von Papazoglou, Andreas S, Karagiannidis, Efstratios, Liatsos, Alexandros, Bompoti, Andreana, Moysidis, Dimitrios V, Arvanitidis, Christos, Tsolaki, Fani, Tsagkaropoulos, Sokratis, Theocharis, Stamatios, Tagarakis, Georgios, Michaelson, James S, Herrmann, Markus D

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A Regulatory Science Initiative to Harmonize and Standardize Digital Pathology and Machine Learning Processes to Speed up Clinical Innovation to Patients von Marble, Hetal Desai, Huang, Richard, Dudgeon, Sarah Nixon, Lowe, Amanda, Herrmann, Markus D., Blakely, Scott, Leavitt, Matthew O., Isaacs, Mike, Hanna, Matthew G., Sharma, Ashish, Veetil, Jithesh, Goldberg, Pamela, Schmid, Joachim H., Lasiter, Laura, Gallas, Brandon D., Abels, Esther, Lennerz, Jochen K.

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National Cancer Institute Imaging Data Commons: Toward Transparency, Reproducibility, and Scalability in Imaging Artificial Intelligence von Fedorov, Andrey, Longabaugh, William J R, Pot, David, Clunie, David A, Pieper, Steven D, Gibbs, David L, Bridge, Christopher, Herrmann, Markus D, Homeyer, André, Lewis, Rob, Aerts, Hugo J W L, Krishnaswamy, Deepa, Thiriveedhi, Vamsi Krishna, Ciausu, Cosmin, Schacherer, Daniela P, Bontempi, Dennis, Pihl, Todd, Wagner, Ulrike, Farahani, Keyvan, Kim, Erika, Kikinis, Ron

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The NCI Imaging Data Commons as a platform for reproducible research in computational pathology von Schacherer, Daniela P., Herrmann, Markus D., Clunie, David A., Höfener, Henning, Clifford, William, Longabaugh, William J.R., Pieper, Steve, Kikinis, Ron, Fedorov, Andrey, Homeyer, André

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Recommendations for Performance Evaluation of Machine Learning in Pathology: A Concept Paper From the College of American Pathologists von Hanna, Matthew G, Olson, Niels H, Zarella, Mark, Dash, Rajesh C, Herrmann, Markus D, Furtado, Larissa V, Stram, Michelle N, Raciti, Patricia M, Hassell, Lewis, Mays, Alex, Pantanowitz, Liron, Sirintrapun, Joseph S, Krishnamurthy, Savitri, Parwani, Anil, Lujan, Giovanni, Evans, Andrew, Glassy, Eric F, Bui, Marilyn M, Singh, Rajendra, Souers, Rhona J, de Baca, Monica E, Seheult, Jansen N

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Highdicom: a Python Library for Standardized Encoding of Image Annotations and Machine Learning Model Outputs in Pathology and Radiology von Bridge, Christopher P., Gorman, Chris, Pieper, Steven, Doyle, Sean W., Lennerz, Jochen K., Kalpathy-Cramer, Jayashree, Clunie, David A., Fedorov, Andriy Y., Herrmann, Markus D.

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Implementing the DICOM Standard for Digital Pathology von Herrmann, Markus D., Clunie, David A., Fedorov, Andriy, Doyle, Sean W., Pieper, Steven, Klepeis, Veronica, Le, Long P, Mutter, George L., Milstone, David S., Schultz, Thomas J., Kikinis, Ron, Kotecha, Gopal K., Hwang, David H., Andriole, Katherine P, lafrate, A. John, Brink, James A., Boland, Giles W., Dreyer, Keith J., Michalski, Mark, Golden, Jeffrey A., Louis, David N., Lennerz, Jochen K.

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102 Immune landscape of adenoid cystic carcinoma using multiplex immunofluorescence and digital pathology von Li, Annie, Thierauf, Julia, Gonda, Bianca L, Paternos, Adam von, Bhan, Atul K, Denize, Thomas, Kaluziak, Stefan T, Herrmann, Markus D, John Iafrate, A

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Transitory dasatinib-resistant states in KITmut t(8;21) acute myeloid leukemia cells correlate with altered KIT expression von Herrmann, Markus D, Lennerz, Jochen K, Bullinger, Lars, Bartholomae, Stephan, Holzmann, Karlheinz, Westhoff, Mike-Andrew, Corbacioglu, Selim, Debatin, Klaus-Michael

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Transitory dasatinib-resistant states in KIT(mut) t(8;21) acute myeloid leukemia cells correlate with altered KIT expression von Herrmann, Markus D, Lennerz, Jochen K, Bullinger, Lars, Bartholomae, Stephan, Holzmann, Karlheinz, Westhoff, Mike-Andrew, Corbacioglu, Selim, Debatin, Klaus-Michael

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