Immune Toxicities Elicted by CTLA-4 Blockade in Cancer Patients Are Associated with Early Diversification of the T-cell Repertoire von Oh, David Y, Cham, Jason, Zhang, Li, Fong, Grant, Kwek, Serena S, Klinger, Mark, Faham, Malek, Fong, Lawrence

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Minimal residual disease negativity using deep sequencing is a major prognostic factor in multiple myeloma von Perrot, Aurore, Lauwers-Cances, Valerie, Corre, Jill, Robillard, Nelly, Hulin, Cyrille, Chretien, Marie-Lorraine, Dejoie, Thomas, Maheo, Sabrina, Stoppa, Anne-Marie, Pegourie, Brigitte, Karlin, Lionel, Garderet, Laurent, Arnulf, Bertrand, Doyen, Chantal, Meuleman, Nathalie, Royer, Bruno, Eveillard, Jean-Richard, Benboubker, Lotfi, Dib, Mamoun, Decaux, Olivier, Jaccard, Arnaud, Belhadj, Karim, Brechignac, Sabine, Kolb, Brigitte, Fohrer, Cecile, Mohty, Mohamad, Macro, Margaret, Richardson, Paul G., Carlton, Victoria, Moorhead, Martin, Willis, Tom, Faham, Malek, Anderson, Kenneth C., Harousseau, Jean-Luc, Leleu, Xavier, Facon, Thierry, Moreau, Philippe, Attal, Michel, Avet-Loiseau, Hervé, Munshi, Nikhil

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Deep-sequencing approach for minimal residual disease detection in acute lymphoblastic leukemia von Faham, Malek, Zheng, Jianbiao, Moorhead, Martin, Carlton, Victoria E.H., Stow, Patricia, Coustan-Smith, Elaine, Pui, Ching-Hon, Campana, Dario

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Circulating tumour DNA and CT monitoring in patients with untreated diffuse large B-cell lymphoma: a correlative biomarker study von Roschewski, Mark, MD, Dunleavy, Kieron, MD, Pittaluga, Stefania, MD-PhD, Moorhead, Martin, PhD, Pepin, Francois, PhD, Kong, Katherine, MS, Shovlin, Margaret, RN, Jaffe, Elaine S, MD, Staudt, Louis M, MD-PhD, Lai, Catherine, MD, Steinberg, Seth M, PhD, Chen, Clara C, MD, Zheng, Jianbiao, PhD, Willis, Thomas D, PhD, Faham, Malek, MD-PhD, Wilson, Wyndham H, Dr

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Multiplex Identification of Antigen-Specific T Cell Receptors Using a Combination of Immune Assays and Immune Receptor Sequencing von Klinger, Mark, Pepin, Francois, Wilkins, Jen, Asbury, Thomas, Wittkop, Tobias, Zheng, Jianbiao, Moorhead, Martin, Faham, Malek

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Noninvasive monitoring of diffuse large B-cell lymphoma by immunoglobulin high-throughput sequencing von Kurtz, David M., Green, Michael R., Bratman, Scott V., Scherer, Florian, Liu, Chih Long, Kunder, Christian A., Takahashi, Kazuhiro, Glover, Cynthia, Keane, Colm, Kihira, Shingo, Visser, Brendan, Callahan, Jason, Kong, Katherine A., Faham, Malek, Corbelli, Karen S., Miklos, David, Advani, Ranjana H., Levy, Ronald, Hicks, Rodney J., Hertzberg, Mark, Ohgami, Robert S., Gandhi, Maher K., Diehn, Maximilian, Alizadeh, Ash A.

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Prognostic value of deep sequencing method for minimal residual disease detection in multiple myeloma von Martinez-Lopez, Joaquin, Lahuerta, Juan J., Pepin, François, González, Marcos, Barrio, Santiago, Ayala, Rosa, Puig, Noemí, Montalban, María A., Paiva, Bruno, Weng, Li, Jiménez, Cristina, Sopena, María, Moorhead, Martin, Cedena, Teresa, Rapado, Immaculada, Mateos, María Victoria, Rosiñol, Laura, Oriol, Albert, Blanchard, María J., Martínez, Rafael, Bladé, Joan, San Miguel, Jesús, Faham, Malek, García-Sanz, Ramón

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Discovery of T Cell Receptor β Motifs Specific to HLA–B27–Positive Ankylosing Spondylitis by Deep Repertoire Sequence Analysis von Faham, Malek, Carlton, Victoria, Moorhead, Martin, Zheng, Jianbiao, Klinger, Mark, Pepin, Francois, Asbury, Thomas, Vignali, Marissa, Emerson, Ryan O., Robins, Harlan S., Ireland, James, Baechler‐Gillespie, Emily, Inman, Robert D.

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Diverse somatic mutation patterns and pathway alterations in human cancers von Li, Li, Waring, Paul, Stern, Howard M, Stokoe, David, Zheng, Jianbiao, Eberhard, David A, Chaudhuri, Subhra, Moorhead, Martin, Wang, Weiru, Yue, Peng, Modrusan, Zora, Pujara, Kanan, Faham, Malek, Davis, David P, Eigenbrot, Charles, Tomsho, Lynn P, Janakiraman, Vasantharajan, Stinson, Jeremy, Bourgon, Richard, Carlton, Victoria E. H, Jaiswal, Bijay S, Seshagiri, Somasekar, Kaminker, Joshua S, Schuster, Stephan C, Kan, Zhengyan, Peters, Brock A, Cordes, Shaun, Zhang, Zemin, de Sauvage, Frederic J, Bhatt, Deepali, Haverty, Peter M, Yuan, Wenlin

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Ultra-short cell-free DNA fragments enhance cancer early detection in a multi-analyte blood test combining mutation, protein and fragmentomics von Wang, Fenfen, Li, Xinxing, Li, Mengxing, Liu, Wendi, Lu, Lingjia, Li, Yang, Chen, Xiaojing, Yang, Siqi, Liu, Tao, Cheng, Wen, Weng, Li, Wang, Hongyan, Lu, Dongsheng, Yao, Qianqian, Wang, Yingyu, Wu, Johnny, Wittkop, Tobias, Faham, Malek, Zhou, Huabang, Hu, Heping, Jin, Hai, Hu, Zhiqian, Ma, Ding, Cheng, Xiaodong

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Ultra-sensitive molecular residual disease detection through whole genome sequencing with single-read error correction von Li, Xinxing, Liu, Tao, Bacchiocchi, Antonella, Li, Mengxing, Cheng, Wen, Wittkop, Tobias, Mendez, Fernando L, Wang, Yingyu, Tang, Paul, Yao, Qianqian, Bosenberg, Marcus W, Sznol, Mario, Yan, Qin, Faham, Malek, Weng, Li, Halaban, Ruth, Jin, Hai, Hu, Zhiqian

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Detection of classical Hodgkin lymphoma specific sequence in peripheral blood using a next‐generation sequencing approach von Oki, Yasuhiro, Neelapu, Sattva S., Fanale, Michelle, Kwak, Larry W., Fayad, Luis, Rodriguez, Maria A., Wallace, Michael, Klinger, Mark, Carlton, Victoria, Kong, Katherine, Faham, Malek, Younes, Anas

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Combining next-generation sequencing and immune assays: a novel method for identification of antigen-specific T cells von Klinger, Mark, Kong, Katherine, Moorhead, Martin, Weng, Li, Zheng, Jianbiao, Faham, Malek

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Population structure, differential bias and genomic control in a large-scale, case-control association study von Clayton, David G, Todd, John A, Walker, Neil M, Smyth, Deborah J, Pask, Rebecca, Cooper, Jason D, Maier, Lisa M, Smink, Luc J, Lam, Alex C, Ovington, Nigel R, Stevens, Helen E, Nutland, Sarah, Howson, Joanna M M, Faham, Malek, Moorhead, Martin, Jones, Hywel B, Falkowski, Matthew, Hardenbol, Paul, Willis, Thomas D

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A comparison of minimal residual disease detection in autografts among ASO‐qPCR, droplet digital PCR, and next‐generation sequencing in patients with multiple myeloma who underwent... von Takamatsu, Hiroyuki, Wee, Rachel K., Zaimoku, Yoshitaka, Murata, Ryoichi, Zheng, Jianbiao, Moorhead, Martin, Carlton, Victoria E. H., Kong, Katherine A., Takezako, Naoki, Ito, Shigeki, Miyamoto, Toshihiro, Yokoyama, Kenji, Matsue, Kosei, Sato, Tsutomu, Kurokawa, Toshiro, Yagi, Hideo, Terasaki, Yasushi, Ohata, Kinya, Matsumoto, Morio, Yoshida, Takashi, Faham, Malek, Nakao, Shinji

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Antigen receptor sequencing of paired bone marrow samples shows homogeneous distribution of acute lymphoblastic leukemia subclones von Theunissen, Prisca M J, van Zessen, David, Stubbs, Andrew P, Faham, Malek, Zwaan, Christian M, van Dongen, Jacques J M, Van Der Velden, Vincent H J

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Ovarian carcinomas with genetic and epigenetic BRCA1 loss have distinct molecular abnormalities von Press, Joshua Z, De Luca, Alessandro, Boyd, Niki, Young, Sean, Troussard, Armelle, Ridge, Yolanda, Kaurah, Pardeep, Kalloger, Steve E, Blood, Katherine A, Smith, Margaret, Spellman, Paul T, Wang, Yuker, Miller, Dianne M, Horsman, Doug, Faham, Malek, Gilks, C Blake, Gray, Joe, Huntsman, David G

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comprehensive assay for targeted multiplex amplification of human DNA sequences von Krishnakumar, Sujatha, Zheng, Jianbiao, Wilhelmy, Julie, Faham, Malek, Mindrinos, Michael, Davis, Ronald

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Prediction of epigenetically regulated genes in breast cancer cell lines von Loss, Leandro A, Sadanandam, Anguraj, Durinck, Steffen, Nautiyal, Shivani, Flaucher, Diane, Carlton, Victoria E H, Moorhead, Martin, Lu, Yontao, Gray, Joe W, Faham, Malek, Spellman, Paul, Parvin, Bahram

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High-throughput method for analyzing methylation of CpGs in targeted genomic regions von Nautiyal, Shivani, Carlton, Victoria E. H., Lu, Yontao, Ireland, James S., Flaucher, Diane, Moorhead, Martin, Gray, Joe W., Spellman, Paul, Mindrinos, Michael, Berg, Paul, Faham, Malek, Ecker, Joseph R.

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