APOBEC3A and APOBEC3B Preferentially Deaminate the Lagging Strand Template during DNA Replication von Hoopes, James I., Cortez, Luis M., Mertz, Tony M., Malc, Ewa P., Mieczkowski, Piotr A., Roberts, Steven A.

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An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers von Chan, Kin, Roberts, Steven A, Klimczak, Leszek J, Sterling, Joan F, Saini, Natalie, Malc, Ewa P, Kim, Jaegil, Kwiatkowski, David J, Fargo, David C, Mieczkowski, Piotr A, Getz, Gad, Gordenin, Dmitry A

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Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages von Fang, Yufeng, Coelho, Marco A., Shu, Haidong, Schotanus, Klaas, Thimmappa, Bhagya C., Yadav, Vikas, Chen, Han, Malc, Ewa P., Wang, Jeremy, Mieczkowski, Piotr A., Kronmiller, Brent, Tyler, Brett M., Sanyal, Kaustuv, Dong, Suomeng, Nowrousian, Minou, Heitman, Joseph

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Tracking replication enzymology in vivo by genome-wide mapping of ribonucleotide incorporation von Clausen, Anders R, Lujan, Scott A, Burkholder, Adam B, Orebaugh, Clinton D, Williams, Jessica S, Clausen, Maryam F, Malc, Ewa P, Mieczkowski, Piotr A, Fargo, David C, Smith, Duncan J, Kunkel, Thomas A

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Repair of multiple simultaneous double-strand breaks causes bursts of genome-wide clustered hypermutation von Sakofsky, Cynthia J, Saini, Natalie, Klimczak, Leszek J, Chan, Kin, Malc, Ewa P, Mieczkowski, Piotr A, Burkholder, Adam B, Fargo, David, Gordenin, Dmitry A

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Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition von Lujan, Scott A, Clausen, Anders R, Clark, Alan B, MacAlpine, Heather K, MacAlpine, David M, Malc, Ewa P, Mieczkowski, Piotr A, Burkholder, Adam B, Fargo, David C, Gordenin, Dmitry A, Kunkel, Thomas A

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The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts von Saini, Natalie, Roberts, Steven A, Klimczak, Leszek J, Chan, Kin, Grimm, Sara A, Dai, Shuangshuang, Fargo, David C, Boyer, Jayne C, Kaufmann, William K, Taylor, Jack A, Lee, Eunjung, Cortes-Ciriano, Isidro, Park, Peter J, Schurman, Shepherd H, Malc, Ewa P, Mieczkowski, Piotr A, Gordenin, Dmitry A

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Atypical UV Photoproducts Induce Non-canonical Mutation Classes Associated with Driver Mutations in Melanoma von Laughery, Marian F., Brown, Alexander J., Bohm, Kaitlynne A., Sivapragasam, Smitha, Morris, Haley S., Tchmola, Mila, Washington, Angelica D., Mitchell, Debra, Mather, Stephen, Malc, Ewa P., Mieczkowski, Piotr A., Roberts, Steven A., Wyrick, John J.

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Correction: Repair of multiple simultaneous double-strand breaks causes bursts of genome-wide clustered hypermutation von Sakofsky, Cynthia J, Saini, Natalie, Klimczak, Leszek J, Chan, Kin, Malc, Ewa P, Mieczkowski, Piotr A, Burkholder, Adam B, Fargo, David, Gordenin, Dmitry A

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Cavitation Enhancing Nanodroplets Mediate Efficient DNA Fragmentation in a Bench Top Ultrasonic Water Bath von Kasoji, Sandeep K, Pattenden, Samantha G, Malc, Ewa P, Jayakody, Chatura N, Tsuruta, James K, Mieczkowski, Piotr A, Janzen, William P, Dayton, Paul A

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The Shu complex prevents mutagenesis and cytotoxicity of single-strand specific alkylation lesions von Bonilla, Braulio, Brown, Alexander J., Hengel, Sarah R., Rapchak, Kyle S., Mitchell, Debra, Pressimone, Catherine A., Fagunloye, Adeola A., Luong, Thong T., Russell, Reagan A., Vyas, Rudri K., Mertz, Tony M., Zaher, Hani S., Mosammaparast, Nima, Malc, Ewa P., Mieczkowski, Piotr A., Roberts, Steven A., Bernstein, Kara A.

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Genome-wide maps of alkylation damage, repair, and mutagenesis in yeast reveal mechanisms of mutational heterogeneity von Mao, Peng, Brown, Alexander J, Malc, Ewa P, Mieczkowski, Piotr A, Smerdon, Michael J, Roberts, Steven A, Wyrick, John J

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A Case Study of Genomic Instability in an Industrial Strain of Saccharomyces cerevisiae von Rodrigues-Prause, Aline, Sampaio, Nadia M V, Gurol, Theodore M, Aguirre, Guadalupe M, Sedam, Hailey N C, Chapman, Mary J, Malc, Ewa P, Ajith, V P, Chakraborty, Parijat, Tizei, Pedro A, Pereira, Gonçalo A G, Mieczkowski, Piotr A, Nishant, Koodali T, Argueso, Juan Lucas

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Mutation signatures specific to DNA alkylating agents in yeast and cancers von Saini, Natalie, Sterling, Joan F, Sakofsky, Cynthia J, Giacobone, Camille K, Klimczak, Leszek J, Burkholder, Adam B, Malc, Ewa P, Mieczkowski, Piotr A, Gordenin, Dmitry A

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Characterization of systemic genomic instability in budding yeast von Sampaio, Nadia M. V., Ajith, V. P., Watson, Ruth A., Heasley, Lydia R., Chakraborty, Parijat, Rodrigues-Prause, Aline, Malc, Ewa P., Mieczkowski, Piotr A., Nishant, Koodali T., Argueso, Juan Lucas

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APOBEC3B cytidine deaminase targets the non-transcribed strand of tRNA genes in yeast von Saini, Natalie, Roberts, Steven A., Sterling, Joan F., Malc, Ewa P., Mieczkowski, Piotr A., Gordenin, Dmitry A.

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Corrigendum to “APOBEC3B cytidine deaminase targets the non-transcribed strand of tRNA genes in yeast” [DNA Repair 53 (2017) 4–14] von Saini, Natalie, Roberts, Steven A., Sterling, Joan F., Malc, Ewa P., Mieczkowski, Piotr A., Gordenin, Dmitry A.

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Congenital Midline Cervical Cleft: First Report and Genetic Analysis of Two Related Patients von Masood, Maheer M., Mieczkowski, Piotr, Malc, Ewa P., Foreman, Ann Katherine M., Evans, James P., Clark, J. Madison, Rose, Austin S.

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Variant calling in low-coverage whole genome sequencing of a Native American population sample von Bizon, Chris, Spiegel, Michael, Chasse, Scott A, Gizer, Ian R, Li, Yun, Malc, Ewa P, Mieczkowski, Piotr A, Sailsbery, Josh K, Wang, Xiaoshu, Ehlers, Cindy L, Wilhelmsen, Kirk C

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An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers von Chan, Kin, Roberts, Steven A, Klimczak, Leszek J, Sterling, Joan F, Saini, Natalie, Malc, Ewa P, Kim, Jaegil, Kwiatkowski, David J, Fargo, David C, Mieczkowski, Piotr A, Getz, Gad, Gordenin, Dmitry A

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