Enhancing trust in AI through industry self-governance von Roski, Joachim, Maier, Ezekiel J, Vigilante, Kevin, Kane, Elizabeth A, Matheny, Michael E

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Towards accurate indel calling for oncopanel sequencing through an international pipeline competition at precisionFDA von Gong, Binsheng, Lababidi, Samir, Kusko, Rebecca, Bouri, Khaled, Prezek, Sarah, Thovarai, Vishal, Prasanna, Anish, Maier, Ezekiel J., Golkaram, Mahdi, Sun, Xingqiang, Kyriakidis, Konstantinos, Kitajima, João Paulo, Ebrahim Sahraeian, Sayed Mohammad, Guo, Yunfei, Johanson, Elaine, Jones, Wendell, Tong, Weida, Xu, Joshua

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Model-based transcriptome engineering promotes a fermentative transcriptional state in yeast von Michael, Drew G., Maier, Ezekiel J., Brown, Holly, Gish, Stacey R., Fiore, Christopher, Brown, Randall H., Brent, Michael R.

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NetProphet 2.0: mapping transcription factor networks by exploiting scalable data resources von Kang, Yiming, Liow, Hien-Haw, Maier, Ezekiel J, Brent, Michael R

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Role of Fat Body Lipogenesis in Protection against the Effects of Caloric Overload in Drosophila von Musselman, Laura Palanker, Fink, Jill L., Ramachandran, Prasanna Venkatesh, Patterson, Bruce W., Okunade, Adewole L., Maier, Ezekiel, Brent, Michael R., Turk, John, Baranski, Thomas J.

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Dr. AI, Where Did You Get Your Degree? von Raff, Edward, Lantzy, Shannon, Maier, Ezekiel J.

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Mapping functional transcription factor networks from gene expression data von Haynes, Brian C, Maier, Ezekiel J, Kramer, Michael H, Wang, Patricia I, Brown, Holly, Brent, Michael R

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Seven-Up Is a Novel Regulator of Insulin Signaling von Musselman, Laura Palanker, Fink, Jill L, Maier, Ezekiel J, Gatto, Jared A, Brent, Michael R, Baranski, Thomas J

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Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation von Maier, Ezekiel J, Haynes, Brian C, Gish, Stacey R, Wang, Zhuo A, Skowyra, Michael L, Marulli, Alyssa L, Doering, Tamara L, Brent, Michael R

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Computational Analysis Reveals a Key Regulator of Cryptococcal Virulence and Determinant of Host Response von Gish, Stacey R, Maier, Ezekiel J, Haynes, Brian C, Santiago-Tirado, Felipe H, Srikanta, Deepa L, Ma, Cynthia Z, Li, Lucy X, Williams, Matthew, Crouch, Erika C, Khader, Shabaana A, Brent, Michael R, Doering, Tamara L

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Variants in SARS-CoV-2 associated with mild or severe outcome von Voss, Jameson D, Skarzynski, Martin, McAuley, Erin M, Maier, Ezekiel J, Gibbons, Thomas, Fries, Anthony C, Chapleau, Richard R

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SARS-CoV-2 Genome-Based Severity Predictions Correspond to Lower qPCR Values and Higher Viral Load von Skarzynski, Martin, McAuley, Erin M., Maier, Ezekiel J., Fries, Anthony C., Voss, Jameson D., Chapleau, Richard R.

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Cryptococcus neoformans dual GDP-mannose transporters and their role in biology and virulence von Wang, Zhuo A, Griffith, Cara L, Skowyra, Michael L, Salinas, Nichole, Williams, Matthew, Maier, Ezekiel J, Gish, Stacey R, Liu, Hong, Brent, Michael R, Doering, Tamara L

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A community effort to identify and correct mislabeled samples in proteogenomic studies von Yoo, Seungyeul, Shi, Zhiao, Wen, Bo, Kho, SoonJye, Pan, Renke, Feng, Hanying, Chen, Hong, Carlsson, Anders, Edén, Patrik, Ma, Weiping, Raymer, Michael, Maier, Ezekiel J., Tezak, Zivana, Johanson, Elaine, Hinton, Denise, Rodriguez, Henry, Zhu, Jun, Boja, Emily, Wang, Pei, Zhang, Bing

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Wastewater Surveillance Pilot at US Military Installations: Cost Model Analysis von Sanjak, Jaleal S, McAuley, Erin M, Raybern, Justin, Pinkham, Richard, Tarnowski, Jacob, Miko, Nicole, Rasmussen, Bridgette, Manalo, Christian J, Goodson, Michael, Stamps, Blake, Necciai, Bryan, Sozhamannan, Shanmuga, Maier, Ezekiel J

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PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions von Olson, Nathan D., Wagner, Justin, McDaniel, Jennifer, Stephens, Sarah H., Westreich, Samuel T., Prasanna, Anish G., Johanson, Elaine, Boja, Emily, Maier, Ezekiel J., Serang, Omar, Jáspez, David, Lorenzo-Salazar, José M., Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A., Flores, Carlos, Kyriakidis, Konstantinos, Malousi, Andigoni, Shafin, Kishwar, Pesout, Trevor, Jain, Miten, Paten, Benedict, Chang, Pi-Chuan, Kolesnikov, Alexey, Nattestad, Maria, Baid, Gunjan, Goel, Sidharth, Yang, Howard, Carroll, Andrew, Eveleigh, Robert, Bourgey, Mathieu, Bourque, Guillaume, Li, Gen, Ma, ChouXian, Tang, LinQi, Du, YuanPing, Zhang, ShaoWei, Morata, Jordi, Tonda, Raúl, Parra, Genís, Trotta, Jean-Rémi, Brueffer, Christian, Demirkaya-Budak, Sinem, Kabakci-Zorlu, Duygu, Turgut, Deniz, Kalay, Özem, Budak, Gungor, Narcı, Kübra, Arslan, Elif, Brown, Richard, Johnson, Ivan J., Dolgoborodov, Alexey, Semenyuk, Vladimir, Jain, Amit, Tetikol, H. Serhat, Jain, Varun, Ruehle, Mike, Lajoie, Bryan, Roddey, Cooper, Catreux, Severine, Mehio, Rami, Ahsan, Mian Umair, Liu, Qian, Wang, Kai, Ebrahim Sahraeian, Sayed Mohammad, Fang, Li Tai, Mohiyuddin, Marghoob, Hung, Calvin, Jain, Chirag, Feng, Hanying, Li, Zhipan, Chen, Luoqi, Sedlazeck, Fritz J., Zook, Justin M.

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Advancing Artificial Intelligence and Machine Learning in the U.S. Government Through Improved Public Competitions von Maier, Ezekiel J

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PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions von Olson, Nathan D, Wagner, Justin, McDaniel, Jennifer, Stephens, Sarah H, Westreich, Samuel T, Prasanna, Anish G, Johanson, Elaine, Boja, Emily, Maier, Ezekiel J, Serang, Omar, Jáspez, David, Lorenzo-Salazar, José M, Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A, Flores, Carlos, Kyriakidis, Konstantinos, Malousi, Andigoni, Shafin, Kishwar, Pesout, Trevor, Jain, Miten, Paten, Benedict, Chang, Pi-Chuan, Kolesnikov, Alexey, Nattestad, Maria, Baid, Gunjan, Goel, Sidharth, Yang, Howard, Carroll, Andrew, Eveleigh, Robert, Bourgey, Mathieu, Bourque, Guillaume, Li, Gen, Ma, ChouXian, Tang, LinQi, Du, YuanPing, Zhang, ShaoWei, Morata, Jordi, Tonda, Raúl, Parra, Genís, Trotta, Jean-Rémi, Brueffer, Christian, Demirkaya-Budak, Sinem, Kabakci-Zorlu, Duygu, Turgut, Deniz, Kalay, Özem, Budak, Gungor, Narcı, Kübra, Arslan, Elif, Brown, Richard, Johnson, Ivan J, Dolgoborodov, Alexey, Semenyuk, Vladimir, Jain, Amit, Tetikol, H Serhat, Jain, Varun, Ruehle, Mike, Lajoie, Bryan, Roddey, Cooper, Catreux, Severine, Mehio, Rami, Ahsan, Mian Umair, Liu, Qian, Wang, Kai, Ebrahim Sahraeian, Sayed Mohammad, Fang, Li Tai, Mohiyuddin, Marghoob, Hung, Calvin, Jain, Chirag, Feng, Hanying, Li, Zhipan, Chen, Luoqi, Sedlazeck, Fritz J, Zook, Justin M

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Inferring gene expression from ribosomal promoter sequences, a crowdsourcing approach von Meyer, Pablo, Siwo, Geoffrey, Zeevi, Danny, Sharon, Eilon, Norel, Raquel, Segal, Eran, Stolovitzky, Gustavo

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Advancing Artificial Intelligence and Machine Learning in the U.S. Government Through Improved Public Competitions von Maier, Ezekiel J

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