Epigenomic analysis of the HOX gene loci reveals mechanisms that may control canonical expression patterns in AML and normal hematopoietic cells von Spencer, D H, Young, M A, Lamprecht, T L, Helton, N M, Fulton, R, O'Laughlin, M, Fronick, C, Magrini, V, Demeter, R T, Miller, C A, Klco, J M, Wilson, R K, Ley, T J

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A genomic case study of mixed fibrolamellar hepatocellular carcinoma von Griffith, O.L., Griffith, M., Krysiak, K., Magrini, V., Ramu, A., Skidmore, Z.L., Kunisaki, J., Austin, R., McGrath, S., Zhang, J., Demeter, R., Graves, T., Eldred, J.M., Walker, J., Larson, D.E., Maher, C.A., Lin, Y., Chapman, W., Mahadevan, A., Miksad, R., Nasser, I., Hanto, D.W., Mardis, E.R.

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A genomic analysis of Philadelphia chromosome-negative AML arising in patients with CML von Krysiak, K, Christopher, M J, Skidmore, Z L, Demeter, R T, Magrini, V, Kunisaki, J, O'Laughlin, M, Duncavage, E J, Miller, C A, Ozenberger, B A, Griffith, M, Wartman, L D, Griffith, O L

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Integrated genomic analyses of ovarian carcinoma von Cancer Genome Atlas Research Network, The, Neuvial, Pierre

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Somatic neurofibromatosis type 1 (NF1) inactivation characterizes NF1-associated pilocytic astrocytoma von Gutmann, David H, McLellan, Michael D, Hussain, Ibrahim, Wallis, John W, Fulton, Lucinda L, Fulton, Robert S, Magrini, Vincent, Demeter, Ryan, Wylie, Todd, Kandoth, Cyriac, Leonard, Jeffrey R, Guha, Abhijit, Miller, Christopher A, Ding, Li, Mardis, Elaine R

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Viral discovery and sequence recovery using DNA microarrays von Wang, David, Urisman, Anatoly, Liu, Yu-Tsueng, Springer, Michael, Ksiazek, Thomas G, Erdman, Dean D, Mardis, Elaine R, Hickenbotham, Matthew, Magrini, Vincent, Eldred, James, Latreille, J Phillipe, Wilson, Richard K, Ganem, Don, DeRisi, Joseph L

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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. [Erratum: 2005 Feb. 17, v. 433, no. 7027, p. 777.] von Hillier, L.W., Miller, W., Birney, E., Warren, Wesley, Hardison, R.C., Ponting, C.P., Bork, Peer, Burt, D.W., Groenen, M.A.M., Delany, M.E., Dodgson, J.B., Chinwalla, A.T., Cliften, P.F., Clifton, S.W., Delehaunty, K.D., Fronick, C., Fulton, R.S., Graves, T.A., Kremitzki, C., Layman, D., Magrini, V., Mcpherson, J.D., Miner, T.L., Minx, P., Nash, W.E., Nhan, M.N., Nelson, J.O., Oddy, L.G., Pohl, C.S., Randall-Maher, J., Smith, S.M., Wallis, J.W., Yang, S.P., Romanov, M.N., Rondelli, C.M., Paton, B., Smith, J., Morrice, D., Daniels, L., Tempest, H.G., Robertson, L., Masabanda, J.S., Griffin, D.K., Vignal, Alain, Fillon, Valerie, Jacobbson, L., Kerje, S., Andersson, Leif, Crooijmans, R.P.M.A., Aerts, J., van Der Poel, J.J., Ellegren, H., Caldwell, R.B., Hubbard, S.J., Grafham, D.V., Kierzek, A.M., Mclaren, S.R., Overton, I.M., Arakawa, H., Beattie, K.J., Bezzubov, Y., Boardman, P.E., Bonfield, J.K., Croning, M.D.R., Davies, R.M., Francis, M.D., Humphray, S.J., Scott, C.E., Taylor, R.G., Tickle, C., Brown, W.R.A., Rogers, J., Buerstedde, J.M., Wilson, S.A., Stubbs, L., Ovcharenko, I., Gordon, Laurence, Lucas, S., Miller, M.M., Inoko, H., Shiina, T., Kaufman, Jim, Salomonsen, J., Skjoedt, K., Wong, G.K.S., Wang, J., Liu, B., Yu, J., Yang, H.M., Nefedov, M., Koriabine, M., Dejong, P.J., Goodstadt, L., Webber, C., Dickens, N.J., Letunic, I., Suyama, M., Torrents, D., von Mering, C., Zdobnov, E.M.

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Exploiting Oxytricha trifallax nanochromosomes to screen for non-coding RNA genes von Jung, Seolkyoung, Swart, Estienne C., Minx, Patrick J., Magrini, Vincent, Mardis, Elaine R., Landweber, Laura F., Eddy, Sean R.

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A genomic case study of mixed fibrolamellar hepatocellular carcinoma von Griffith, O. L, Griffith, M, Krysiak, K, Magrini, V, Ramu, A, Skidmore, Z. L, Kunisaki, J, Austin, R, McGrath, S, Zhang, J, Demeter, R, Graves, T, Eldred, J. M, Walker, J, Larson, D. E, Maher, C. A, Lin, Y, Chapman, W, Mahadevan, A, Miksad, R, Nasser, I, Hanto, D. W, Mardis, E. R

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Temperate Myxococcus xanthus phage Mx8 encodes a DNA adenine methylase, Mox von Magrini, V, Salmi, D, Thomas, D, Herbert, S K, Hartzell, P L, Youderian, P

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Re-sequencing Expands Our Understanding of the Phenotypic Impact of Variants at GWAS Loci von Service, SK, Teslovich, TM, Fuchsberger, C, Ramensky, V, Yajnik, P, Koboldt, DC, Larson, DE, Zhang, Q, Lin, L, Welch, R, Ding, L, McLellan, MD, O'Laughlin, M, Fronick, C, Fulton, LL, Magrini, V, Swift, A, Elliott, P, Jarvelin, M-R, Kaakinen, M, McCarthy, MI, Peltonen, L, Pouta, A, Bonnycastle, LL, Collins, FS, Narisu, N, Stringham, HM, Tuomilehto, J, Ripatti, S, Fulton, RS, Sabatti, C, Wilson, RK, Boehnke, M, Freimer, NB

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A method for isolating and analyzing human mRNA from newborn stool von Bennett, William E., González-Rivera, Rosbel, Shaikh, Nurmohammad, Magrini, Vincent, Boykin, Michelle, Warner, Barbara B., Hamvas, Aaron, Tarr, Phillip I.

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Characterization of the microRNAome in a patient with acute myeloid leukemia von Ramsingh, G., Koboldt, D., Magrini, V., Trissal, M., Koul, S., Chang, L., Nagarajan, R., Ley, T. J., Mardis, E., Link, D. C.

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Site-specific recombination of temperate Myxococcus xanthus phage Mx8: genetic elements required for integration von Magrini, V, Creighton, C, Youderian, P

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Gallus GBrowse: a unified genomic database for the chicken von Schmidt, Carl J., Romanov, Michael, Ryder, Oliver, Magrini, Vincent, Hickenbotham, Matthew, Glasscock, Jarret, McGrath, Sean, Mardis, Elaine, Stein, Lincoln D.

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Molecular mycology: a genetic toolbox for Histoplasma capsulatum von Magrini, Vincent, Goldman, William E

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Fosmid-based physical mapping of the Histoplasma capsulatum genome von Magrini, Vincent, Warren, Wesley C, Wallis, John, Goldman, William E, Xu, Jian, Mardis, Elaine R, McPherson, John D

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Sequencing an Acute Myeloid Leukemia (AML) Genome with “Next Generation” Technologies von Ley, Timothy James, DiPersio, J., Ding, L., Ries, R., Magrini, V., Payton, J., McGrath, S., Walter, M., Wylie, T., Dunford-Shore, B., Chen, K., McLellan, M., Wendl, M., Dooling, D., Cook, L., Heath, S., Baty, J., Ivanovich, J., Link, D., Graubert, T., Tomasson, M., Westervelt, P., Watson, M., Shannon, W., Wilson, R., Mardis, E.

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Site-specific recombination of temperate Myxococcus xanthus phage Mx8: regulation of integrase activity by reversible, covalent modification von Magrini, V, Storms, M L, Youderian, P

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Genetic Determinants of Immunity and Integration of Temperate Myxococcus xanthus Phage Mx8 von Salmi, D, Magrini, V, Hartzell, P L, Youderian, P

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