An objective comparison of cell-tracking algorithms von Ulman, Vladimír, Maška, Martin, Magnusson, Klas E G, Ronneberger, Olaf, Haubold, Carsten, Harder, Nathalie, Matula, Pavel, Matula, Petr, Svoboda, David, Radojevic, Miroslav, Smal, Ihor, Rohr, Karl, Jaldén, Joakim, Blau, Helen M, Dzyubachyk, Oleh, Lelieveldt, Boudewijn, Xiao, Pengdong, Li, Yuexiang, Cho, Siu-Yeung, Dufour, Alexandre C, Olivo-Marin, Jean-Christophe, Reyes-Aldasoro, Constantino C, Solis-Lemus, Jose A, Bensch, Robert, Brox, Thomas, Stegmaier, Johannes, Mikut, Ralf, Wolf, Steffen, Hamprecht, Fred A, Esteves, Tiago, Quelhas, Pedro, Demirel, Ömer, Malmström, Lars, Jug, Florian, Tomancak, Pavel, Meijering, Erik, Muñoz-Barrutia, Arrate, Kozubek, Michal, Ortiz-de-Solorzano, Carlos

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Global Linking of Cell Tracks Using the Viterbi Algorithm von Magnusson, Klas E. G., Jalden, Joakim, Gilbert, Penney M., Blau, Helen M.

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The Cell Tracking Challenge: 10 years of objective benchmarking von Maška, Martin, Ulman, Vladimír, Delgado-Rodriguez, Pablo, Gómez-de-Mariscal, Estibaliz, Nečasová, Tereza, Guerrero Peña, Fidel A., Ren, Tsang Ing, Meyerowitz, Elliot M., Scherr, Tim, Löffler, Katharina, Mikut, Ralf, Guo, Tianqi, Wang, Yin, Allebach, Jan P., Bao, Rina, Al-Shakarji, Noor M., Rahmon, Gani, Toubal, Imad Eddine, Palaniappan, Kannappan, Lux, Filip, Matula, Petr, Sugawara, Ko, Magnusson, Klas E. G., Aho, Layton, Cohen, Andrew R., Arbelle, Assaf, Ben-Haim, Tal, Raviv, Tammy Riklin, Isensee, Fabian, Jäger, Paul F., Maier-Hein, Klaus H., Zhu, Yanming, Ederra, Cristina, Urbiola, Ainhoa, Meijering, Erik, Cunha, Alexandre, Muñoz-Barrutia, Arrate, Kozubek, Michal, Ortiz-de-Solórzano, Carlos

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Prostaglandin E2 is essential for efficacious skeletal muscle stem-cell function, augmenting regeneration and strength von Ho, Andrew T. V., Palla, Adelaida R., Blake, Matthew R., Yucel, Nora D., Wang, Yu Xin, Magnusson, Klas E. G., Holbrook, Colin A., Kraft, Peggy E., Delp, Scott L., Blau, Helen M.

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A benchmark for comparison of cell tracking algorithms von Maška, Martin, Ulman, Vladimír, Svoboda, David, Matula, Pavel, Matula, Petr, Ederra, Cristina, Urbiola, Ainhoa, España, Tomás, Venkatesan, Subramanian, Balak, Deepak M W, Karas, Pavel, Bolcková, Tereza, Streitová, Markéta, Carthel, Craig, Coraluppi, Stefano, Harder, Nathalie, Rohr, Karl, Magnusson, Klas E G, Jaldén, Joakim, Blau, Helen M, Dzyubachyk, Oleh, Křížek, Pavel, Hagen, Guy M, Pastor-Escuredo, David, Jimenez-Carretero, Daniel, Ledesma-Carbayo, Maria J, Muñoz-Barrutia, Arrate, Meijering, Erik, Kozubek, Michal, Ortiz-de-Solorzano, Carlos

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Segmentation and Track-Analysis in Time-Lapse Imaging of Bacteria von Sadanandan, Sajith Kecheril, Baltekin, Ozden, Magnusson, Klas E. G., Boucharin, Alexis, Ranefall, Petter, Jalden, Joakim, Elf, Johan, Wahlby, Carolina

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Machine learning-based classification of dual fluorescence signals reveals muscle stem cell fate transitions in response to regenerative niche factors von Togninalli, Matteo, Ho, Andrew T. V., Madl, Christopher M., Holbrook, Colin A., Wang, Yu Xin, Magnusson, Klas E. G., Kirillova, Anna, Chang, Andrew, Blau, Helen M.

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Engineered DNA plasmid reduces immunity to dystrophin while improving muscle force in a model of gene therapy of Duchenne dystrophy von Ho, Peggy P., Lahey, Lauren J., Mourkioti, Foteini, Kraft, Peggy E., Filareto, Antonio, Brandt, Moritz, Magnusson, Klas E. G., Finn, Eric E., Chamberlain, Jeffrey S., Robinson, William H., Blau, Helen M., Steinman, Lawrence

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A collagen-based microwell migration assay to study NK-target cell interactions von Olofsson, Per E., Brandt, Ludwig, Magnusson, Klas E. G., Frisk, Thomas, Jaldén, Joakim, Önfelt, Björn

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Substrate Elasticity Regulates Skeletal Muscle Stem Cell Self-Renewal in Culture von Gilbert, P.M, Havenstrite, K.L, Magnusson, K.E.G, Sacco, A, Leonardi, N.A, Kraft, P, Nguyen, N.K, Thrun, S, Lutolf, M.P, Blau, H.M

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Objective comparison of particle tracking methods von Chenouard, Nicolas, Smal, Ihor, de Chaumont, Fabrice, Maška, Martin, Sbalzarini, Ivo F, Gong, Yuanhao, Cardinale, Janick, Carthel, Craig, Coraluppi, Stefano, Winter, Mark, Cohen, Andrew R, Godinez, William J, Rohr, Karl, Kalaidzidis, Yannis, Liang, Liang, Duncan, James, Shen, Hongying, Xu, Yingke, Magnusson, Klas E G, Jaldén, Joakim, Blau, Helen M, Paul-Gilloteaux, Perrine, Roudot, Philippe, Kervrann, Charles, Waharte, François, Tinevez, Jean-Yves, Shorte, Spencer L, Willemse, Joost, Celler, Katherine, van Wezel, Gilles P, Dan, Han-Wei, Tsai, Yuh-Show, de Solórzano, Carlos Ortiz, Olivo-Marin, Jean-Christophe, Meijering, Erik

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A single cell bioengineering approach to elucidate mechanisms of adult stem cell self-renewal von Gilbert, Penney M, Corbel, Stephane, Doyonnas, Regis, Havenstrite, Karen, Magnusson, Klas E G, Blau, Helen M

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A batch algorithm using iterative application of the Viterbi algorithm to track cells and construct cell lineages von Magnusson, K. E. G., Jalden, J.

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Segmentation and tracking of cells and particles in time-lapse microscopy von Magnusson, Klas E. G.

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A single cell bioengineering approach to elucidate mechanisms of adult stem cell self-renewalPublished as part of an iBiology themed issue entitled From Single Cells to Biology Edi... von Gilbert, Penney M, Corbel, Stephane, Doyonnas, Regis, Havenstrite, Karen, Magnusson, Klas E. G, Blau, Helen M

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Optimal Scheduling for Interference Mitigation by Range Information von Yajnanarayana, Vijaya, Magnusson, Klas E. G., Brandt, Rasmus, Dwivedi, Satyam, Handel, Peter

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Optimal Scheduling for Interference Mitigation by Range Information von Yajnanarayana, Vijaya, Magnusson, Klas E. G, Brandt, Rasmus, Dwivedi, Satyam, Händel, Peter

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Optimal Scheduling for Interference Mitigation by Range Information von Yajnanarayana, Vijaya, Magnusson, Klas E G, Brandt, Rasmus, Dwivedi, Satyam, Händel, Peter

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Optimal Scheduling for Interference Mitigation by Range Information von Yajnanarayana, Vijaya, Magnusson, Klas E. G., Brandt, Rasmus, Dwivedi, Satyam, Händel, Peter

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Objective comparison of particle tracking methods von Chenouard, Nicolas, Smal, Ihor, De Chaumont, Fabrice, Maska, Martin, Sbalzarini, Ivo F, Gong, Yuanhao, Cardinale, Janick, Carthel, Craig, Coraluppi, Stefano, Winter, Mark, Cohen, Andrew R, Godinez, William J, Rohr, Karl, Kalaidzidis, Yannis, Liang, Liang, Duncan, James, Shen, Hongying, Xu, Yingke, Magnusson, Klas E. G, Jalden, Joakim, Blau, Helen M, Paul-Gilloteaux, Perrine, Roudot, Philippe, Kervrann, Charles, Waharte, Francois, Tinevez, Jean-Yves, Shorte, Spencer L, Willemse, Joost, Celler, Katherine, Van Wezel, Gilles P, Dan, Han-Wei, Tsai, Yuh-Show, Ortiz De Solorzano, Carlos, Olivo-Marin, Jean-Christophe, Meijering, Erik

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