The Role of KRAB-ZFPs in Transposable Element Repression and Mammalian Evolution von Yang, Peng, Wang, Yixuan, Macfarlan, Todd S.

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Long Terminal Repeats: From Parasitic Elements to Building Blocks of the Transcriptional Regulatory Repertoire von Thompson, Peter J., Macfarlan, Todd S., Lorincz, Matthew C.

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The Arms Race Between KRAB-Zinc Finger Proteins and Endogenous Retroelements and Its Impact on Mammals von Bruno, Melania, Mahgoub, Mohamed, Macfarlan, Todd S

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Ten things you should know about transposable elements von Bourque, Guillaume, Burns, Kathleen H, Gehring, Mary, Gorbunova, Vera, Seluanov, Andrei, Hammell, Molly, Imbeault, Michaël, Izsvák, Zsuzsanna, Levin, Henry L, Macfarlan, Todd S, Mager, Dixie L, Feschotte, Cédric

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Anthropoid primate-specific retroviral element THE1B controls expression of CRH in placenta and alters gestation length von Dunn-Fletcher, Caitlin E, Muglia, Lisa M, Pavlicev, Mihaela, Wolf, Gernot, Sun, Ming-An, Hu, Yueh-Chiang, Huffman, Elizabeth, Tumukuntala, Shivani, Thiele, Katri, Mukherjee, Amrita, Zoubovsky, Sandra, Zhang, Xuzhe, Swaggart, Kayleigh A, Lamm, Katherine Y Bezold, Jones, Helen, Macfarlan, Todd S, Muglia, Louis J

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Endogenous Retroviruses Drive Lineage-Specific Regulatory Evolution across Primate and Rodent Placentae von Sun, Ming-an, Wolf, Gernot, Wang, Yejun, Senft, Anna D, Ralls, Sherry, Jin, Jinpu, Dunn-Fletcher, Caitlin E, Muglia, Louis J, Macfarlan, Todd S

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KRAB zinc finger protein diversification drives mammalian interindividual methylation variability von Bertozzi, Tessa M., Elmer, Jessica L., Macfarlan, Todd S., Ferguson-Smith, Anne C.

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KRAB-zinc finger protein gene expansion in response to active retrotransposons in the murine lineage von Wolf, Gernot, de Iaco, Alberto, Sun, Ming-An, Bruno, Melania, Tinkham, Matthew, Hoang, Don, Mitra, Apratim, Ralls, Sherry, Trono, Didier, Macfarlan, Todd S

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The KRAB zinc finger protein ZFP809 is required to initiate epigenetic silencing of endogenous retroviruses von Wolf, Gernot, Yang, Peng, Füchtbauer, Annette C, Füchtbauer, Ernst-Martin, Silva, Andreia M, Park, Chungoo, Wu, Warren, Nielsen, Anders L, Pedersen, Finn S, Macfarlan, Todd S

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Spotting the enemy within: Targeted silencing of foreign DNA in mammalian genomes by the Krüppel-associated box zinc finger protein family von Wolf, Gernot, Greenberg, David, Macfarlan, Todd S

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Revealing the Complexity of Retroviral Repression von Wolf, Gernot, Macfarlan, Todd S.

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LSD1n is an H4K20 demethylase regulating memory formation via transcriptional elongation control von Wang, Jianxun, Telese, Francesca, Tan, Yuliang, Li, Wenbo, Jin, Chunyu, He, Xin, Basnet, Harihar, Ma, Qi, Merkurjev, Daria, Zhu, Xiaoyan, Liu, Zhijie, Zhang, Jie, Ohgi, Kenny, Taylor, Havilah, White, Ryan R, Tazearslan, Cagdas, Suh, Yousin, Macfarlan, Todd S, Pfaff, Samuel L, Rosenfeld, Michael G

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Regulation of endogenous retrovirus-derived regulatory elements by GATA2/3 and MSX2 in human trophoblast stem cells von Du, Cui, Jiang, Jing, Li, Yuzhuo, Yu, Miao, Jin, Jian, Chen, Shuai, Fan, Hairui, Macfarlan, Todd S, Cao, Bin, Sun, Ming-An

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TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells von Rowe, Helen M, Kapopoulou, Adamandia, Corsinotti, Andrea, Fasching, Liana, Macfarlan, Todd S, Tarabay, Yara, Viville, Stéphane, Jakobsson, Johan, Pfaff, Samuel L, Trono, Didier

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Endogenous retroviruses and neighboring genes are coordinately repressed by LSD1/KDM1A von Macfarlan, Todd S, Gifford, Wesley D, Agarwal, Saurabh, Driscoll, Shawn, Lettieri, Karen, Wang, Jianxun, Andrews, Shane E, Franco, Laura, Rosenfeld, Michael G, Ren, Bing, Pfaff, Samuel L

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Dual histone methyl reader ZCWPW1 facilitates repair of meiotic double strand breaks in male mice von Mahgoub, Mohamed, Paiano, Jacob, Bruno, Melania, Wu, Wei, Pathuri, Sarath, Zhang, Xing, Ralls, Sherry, Cheng, Xiaodong, Nussenzweig, André, Macfarlan, Todd S

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Transposable elements shape the evolution of mammalian development von Senft, Anna D., Macfarlan, Todd S.

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A placental growth factor is silenced in mouse embryos by the zinc finger protein ZFP568 von Yang, Peng, Wang, Yixuan, Hoang, Don, Tinkham, Matthew, Patel, Anamika, Sun, Ming-An, Wolf, Gernot, Baker, Mairead, Chien, Huan-Chieh, Lai, Kuan-Yu Nick, Cheng, Xiaodong, Shen, Che-Kun James, Macfarlan, Todd S.

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Maternally provided LSD1/KDM1A enables the maternal-to-zygotic transition and prevents defects that manifest postnatally von Wasson, Jadiel A, Simon, Ashley K, Myrick, Dexter A, Wolf, Gernot, Driscoll, Shawn, Pfaff, Samuel L, Macfarlan, Todd S, Katz, David J

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Local compartment changes and regulatory landscape alterations in histone H1-depleted cells von Geeven, Geert, Zhu, Yun, Kim, Byung Ju, Bartholdy, Boris A, Yang, Seung-Min, Macfarlan, Todd S, Gifford, Wesley D, Pfaff, Samuel L, Verstegen, Marjon J A M, Pinto, Hugo, Vermunt, Marit W, Creyghton, Menno P, Wijchers, Patrick J, Stamatoyannopoulos, John A, Skoultchi, Arthur I, de Laat, Wouter

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